E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L066569
LIG001139
dCeMM1-DCAF15
Cc1ccc(S(=O)(=O)N/N=C/c2cc(Br)ccc2O)cc1
C14H13BrN2O3S
369.240000
PBEIAQYKTXKQGF-CXUHLZMHSA-N - -
MolGlueDB
MolGlueDB:MGDB362
Local ready
Direct docking supported
E3L066570
LIG001140
19
CN(CCCO[C@H]1C[C@H](Nc2cccc3c2C(=O)N(C2CCC(=O)NC2=O)C3=O)C1)C[C@H]1CC[C@H](n2cc3cc(NC(=O)c4cccc(C(F)(F)F)n4)c(C(F)F)cc3n2)CC1
C43H45F5N8O6
864.873000
PBFNLOLLNOCFFN-VOSGNALJSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50639844; MolGlueDB:MGDB522
Local ready
Direct docking supported
E3L066571
LIG001141
LIG001141
CN[C@@H](C)C(=O)N[C@H]1CCO[C@H]2CC(C)(C)[C@@H](C(=O)N[C@@H]3CCCc4ccccc43)N2C1=O
C25H36N4O4
456.587000
PBGOFGSVVXGJCA-KDJJVYBXSA-N P98170, Q96CA5 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 7
BindingDB, e3_ligand
BindingDB:BDBM391831; e3_ligand:59
Related BindingDB:BDBM391805
Local ready
Direct docking supported
E3L066572
LIG001142
10
CN(C)c1nc(Cc2ccccc2)nc2[nH]c3cc(-c4nnn(C)n4)ccc3c12
C21H20N8
384.447000
PCORHTJEYKGPDA-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1418
Local ready
Direct docking supported
E3L066573
LIG001143
AKOS018335169
COc1ccccc1N1CCC(=O)NC1=O
C11H12N2O3
220.228000
PCUUMCBQIMQBTC-UHFFFAOYSA-N Q96SW2 -
e3_ligand
e3_ligand:79
Local ready
Direct docking supported
E3L066574
LIG001144
73
O=C1CCC(N2Cc3cc(NC(=O)C4=Cc5ccc(Br)cc5OC4)ccc3C2=O)C(=O)N1
C23H18BrN3O5
496.317000
PDLMVPIBYOAMMI-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1204
Local ready
Direct docking supported
E3L066575
LIG001145
8d
Nc1ccc(C(=O)NC2CCC(=O)NC2=O)c(F)c1
C12H12FN3O3
265.244000
PDXLABFIWQGDLW-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50630593; MolGlueDB:MGDB799
Local ready
Direct docking supported
E3L066576
LIG001146
QXG-6471
O=C1CCC(N2C(=O)c3ccc(NC(=O)c4cn5ccccc5n4)cc3C2=O)C(=O)N1
C21H15N5O5
417.381000
PEGYPANAEKMMQM-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB959
Local ready
Direct docking supported
E3L066578
LIG001148
15
O=C1CCC(N2Cc3cc(NCc4ccc5ncccc5c4)ccc3C2=O)C(=O)N1
C23H20N4O3
400.438000
PEVYOSVZSUUDNA-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1229
Local ready
Direct docking supported
E3L066579
LIG001149
20b
O=C1CCC(N2C(=O)c3cccc(C4=C[C@@]4(COOCC(Cl)(Cl)Cl)c4ccc(Br)cc4)c3C2=O)C(=O)N1
C25H18BrCl3N2O6
628.690000
PEXVJXROJKUUCZ-VCUSLETLSA-N - -
MolGlueDB
MolGlueDB:MGDB972
Local ready
Direct docking supported
E3L066580
LIG001150
CU-0906
COc1cc2[nH]c(CNc3nc(N4CCOCC4)nc4c3ncn4-c3cnn(C)c3)nc2cc1Cl
C22H23ClN10O2
494.947000
PFLWENDTYLYORX-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB618
Local ready
Direct docking supported
E3L066581
LIG001151
15a
O=C1CCC(N2Cc3cc([C@@H]4C[C@]4(C(=O)OCC(Cl)(Cl)Cl)c4ccc(Br)cc4)ccc3C2=O)C(=O)N1
C25H20BrCl3N2O5
614.707000
PFPPFUYFOLLWSU-GZODMWGESA-N - -
MolGlueDB
MolGlueDB:MGDB1159
Local ready
Direct docking supported
E3L066582
LIG001152
DS73
Cc1cc2nc(CNc3nc(N4CCN(C)CC4)nc4c(Br)cnn34)[nH]c2cc1C
C20H24BrN9
470.379000
PGDRKKXMPSPTSV-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1614
Local ready
Direct docking supported
E3L066583
LIG001153
TMX-4100
O=C1CCC(n2cc(-c3ccsc3)nn2)C(=O)N1
C11H10N4O2S
262.294000
PGEUBQZQGXWTFO-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1049
Local ready
Direct docking supported
E3L066585
LIG001155
22r
CC(C)(C)c1ccc(NC(=O)NCc2ccc3nnn(C4CCC(=O)NC4=O)c(=O)c3c2)cc1Cl
C24H25ClN6O4
496.955000
PGKOQHQTSGYIEZ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB87
Local ready
Direct docking supported
E3L066586
LIG001156
14j
O=C1CCC(CSc2cccc([N+](=O)[O-])c2)C(=O)N1
C12H12N2O4S
280.305000
PGPDPHWWUDYFET-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50625128; MolGlueDB:MGDB938
Local ready
Direct docking supported
E3L066587
LIG001157
11
Cc1ccc(C(=O)Nc2ccc3c(c2)C(=O)N(C2CCC(=O)NC2=O)C3)cc1
C21H19N3O4
377.400000
PGSLSLNXMKCQFN-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB321
Local ready
Direct docking supported
E3L066588
LIG001158
LIG001158
NC(=O)CC[C@H](N)C(=O)N[C@H]1CC(=O)NC1=O
C9H14N4O4
242.235000
PGTYVWGXAMORPZ-WHFBIAKZSA-N Q96SW2 -
e3_ligand
e3_ligand:116
Local ready
Direct docking supported
E3L066589
LIG001159
40
O=C1CCC(N2Cc3cc(NC(=O)c4ccc5cc(O)ccc5c4)ccc3C2=O)C(=O)N1
C24H19N3O5
429.432000
PIJSUKFVTTZUBA-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1206
Local ready
Direct docking supported
E3L066590
LIG001160
Dinaciclib
CCc1cnn2c(NCc3ccc[n+]([O-])c3)cc(N3CCCC[C@H]3CCO)nc12
C21H28N6O2
396.495000
PIMQWRZWLQKKBJ-SFHVURJKSA-N P51948 Cyclin-H
BindingDB, MolGlueDB
BindingDB:BDBM50139171; MolGlueDB:MGDB1624
Local ready
Direct docking supported