E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L066638
LIG001208
RR-11055
O=C1CC[C@H](N2Cc3c(ccc4c3OC[C@H]3CNCCN43)C2=O)C(=O)N1
C18H20N4O4
356.382000
PWSKIUZMQNAFLN-YGRLFVJLSA-N Q96SW2 -
e3_ligand
e3_ligand:135
Local ready
Direct docking supported
E3L066639
LIG001209
919278
C[C@H](C(=O)Nc1nc2ccccc2[nH]1)N1Cc2ccccc2C1=O
C18H16N4O2
320.352000
PWSSISUOJZBZFT-LLVKDONJSA-N - -
MolGlueDB
MolGlueDB:MGDB22
Local ready
Direct docking supported
E3L066640
LIG001210
6P
Cn1c(=O)n(C2CCC(=O)NC2=O)c2ccc(C#CCO)cc21
C16H15N3O4
313.313000
PYEFOHTXCGPPFF-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB542
Local ready
Direct docking supported
E3L066641
LIG001211
ZXH-1-1080
O=C1CCC(N2Cc3c(NC(=O)CNc4ccnc(Nc5ccccc5F)n4)cccc3C2=O)C(=O)N1
C25H22FN7O4
503.494000
PYGHGYXMTJJEGF-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM585774; MolGlueDB:MGDB1136
Local ready
Direct docking supported
E3L066642
LIG001212
61
O=C1CCC(N2C(=O)c3ccc(C#Cc4ccccc4)cc3C2=O)C(=O)N1
C21H14N2O4
358.353000
PZDBMFUJKJPRPT-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB947
Local ready
Direct docking supported
E3L066643
LIG001213
dALK-2-neg
COc1ccc(C(=O)CCC(=O)N2CCC(n3cc(-c4cnc(N)c(O[C@H](C)c5c(Cl)ccc(F)c5Cl)c4)cn3)CC2)cc1
C32H32Cl2FN5O4
640.543000
QACOAZXXGLTZOM-LJQANCHMSA-N - -
MolGlueDB
MolGlueDB:MGDB1425
Local ready
Direct docking supported
E3L066644
LIG001214
NK7-902
CCN[C@@H]1CC[C@H]2CC[C@@H]1N2c1ccc2c(c1)C(=O)N(C1CCC(=O)NC1=O)C2=O
C22H26N4O4
410.474000
QAKJEKTXKXAPBP-MGCURZBSSA-N - -
MolGlueDB
MolGlueDB:MGDB460
Local ready
Direct docking supported
E3L066645
LIG001215
CPD-2743
O=C1CCC(N2Cc3cccc(OCc4ccc(CN5CCOCC5)cc4)c3C2)C(=O)N1
C25H29N3O4
435.524000
QANUJVJMFPONSK-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50631810; MolGlueDB:MGDB317
Local ready
Direct docking supported
E3L066646
LIG001216
17b
O=C1CCC(N2Cc3ccc([C@H]4C[C@@]4(COOCC(Cl)(Cl)Cl)c4ccc(Br)cc4)cc3C2=O)C(=O)N1
C25H22BrCl3N2O5
616.723000
QAPXKPNRTVQPCZ-XARDSYGASA-N - -
MolGlueDB
MolGlueDB:MGDB1237
Local ready
Direct docking supported
E3L066647
LIG001217
RG7112
CCOc1cc(C(C)(C)C)ccc1C1=N[C@@](C)(c2ccc(Cl)cc2)[C@@](C)(c2ccc(Cl)cc2)N1C(=O)N1CCN(CCCS(C)(=O)=O)CC1
C38H48Cl2N4O4S
727.799000
QBGKPEROWUKSBK-QPPIDDCLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, e3_ligand
BindingDB:BDBM50434287; e3_ligand:11
Local ready
Direct docking supported
E3L066648
LIG001218
ML 1-14
CCOC(=O)Oc1cc(NC(=O)C[C@@H]2N=C(c3ccc(Cl)cc3)c3c(sc(C)c3C)-n3c(C)nnc32)c(Cl)cc1Cl
C28H24Cl3N5O4S
632.957000
QBKZPTQQWUXYEY-NRFANRHFSA-N - -
MolGlueDB
MolGlueDB:MGDB496
Local ready
Direct docking supported
E3L066649
LIG001219
ZZ7-16-064
CC(C)S(=O)(=O)c1ccccc1Nc1nc(N[C@@H]2CCCN(C(=O)c3ccc4ccccc4c3)C2)ncc1Cl
C29H30ClN5O3S
564.111000
QBNZXCXZSWFNKZ-HSZRJFAPSA-N - -
MolGlueDB
MolGlueDB:MGDB172
Local ready
Direct docking supported
E3L066650
LIG001220
ML1-13
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)Nc1ccc(OC(=O)OC(C)(C)C)cc1)c1nnc(C)n1-2
C30H30ClN5O4S
592.121000
QBQCOKTYWVJGSU-QHCPKHFHSA-N - -
MolGlueDB
MolGlueDB:MGDB254
Local ready
Direct docking supported
E3L066651
LIG001221
Lib-B-12L
Cc1nc2ccccn2c1/C=N/NC(=O)COc1ccccc1-c1cccc2c1CN(C1CCC(=O)NC1=O)C2=O
C30H26N6O5
550.575000
QBYSPODHISPFAH-IBBHUPRXSA-N - -
MolGlueDB
MolGlueDB:MGDB233
Local ready
Direct docking supported
E3L066652
LIG001222
6h
O=C1CCC(N2Cc3c(C#CCCCOc4ccccc4)cccc3C2=O)C(=O)N1
C24H22N2O4
402.450000
QCDVSLZMLAAYRH-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1371
Local ready
Direct docking supported
E3L066653
LIG001223
40
CN1CCN(c2ccc3c(c2)C(=O)N(C2CCC(=O)NC2=O)C3=O)CC1
C18H20N4O4
356.382000
QCWYNTQEGFDVSU-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB578
Local ready
Direct docking supported
E3L066654
LIG001224
6a
O=C1CCC(NC(=O)c2ccccc2)C(=O)N1
C12H12N2O3
232.239000
QDCDITVKCKBZTO-UHFFFAOYSA-N Q16531, Q96SW2 Protein cereblon, DNA damage-binding protein 1
BindingDB, e3_ligand, MolGlueDB
BindingDB:BDBM631083; e3_ligand:102; MolGlueDB:MGDB900
Local ready
Direct docking supported
E3L066656
LIG001226
2M
CC(C)(C)OC(=O)NCCOc1cccc(-c2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)c1
C26H29N3O6
479.533000
QDENOCVJIAGNTR-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB116
Local ready
Direct docking supported
E3L066657
LIG001227
dALK-6
Cc1cc(Nc2ncc(Cl)c(Nc3ccccc3S(=O)(=O)C(C)C)n2)c(OC(C)C)cc1C1CCN(CCCN2CCN(c3cc4c(cc3F)C(=O)N(C3CCC(=O)NC3=O)C4=O)CC2)CC1
C48H57ClFN9O7S
958.558000
QDGYAUAIIMUPTR-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB283
Local ready
Direct docking supported
E3L066658
LIG001228
27d
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CCCC(CO)C4)ncc3Cl)ccc21
C23H31ClN6O3
474.993000
QDLVANQUFIRAGS-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, MolGlueDB
BindingDB:BDBM50511644; MolGlueDB:MGDB551
Local ready
Direct docking supported