E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L008121
BDB008121
BDBM200199
CCOc1ccc(C[C@@H](NC(=O)c2ccccc2C)C(=O)N[C@@H](Cc2cccnc2)C(=O)NCc2ccc(CN)cc2)cc1
C35H39N5O4
593.728000
YBYIYRFQMSDYKZ-AJQTZOPKSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM200199; PubChem:CID71499500
Local ready
Direct docking supported
E3L008122
BDB008122
BDBM200200
CCOc1ccc(C[C@@H](NC(=O)c2[nH]c(C)cc2C)C(=O)N[C@@H](Cc2ccccc2)C(=O)NCc2ccc(CN)cc2)cc1
C35H41N5O4
595.744000
WJCYGURKBSTJEJ-IOWSJCHKSA-N P00748 Coagulation factor XII
BindingDB
BindingDB:BDBM200200
Local ready
Direct docking supported
E3L008123
BDB008123
BDBM200201
CCOc1ccc(C[C@@H](NC(=O)c2ccccc2)C(=O)N[C@@H](Cc2cccnc2)C(=O)NCc2ccc(CN)c(C)c2)cc1
C35H39N5O4
593.728000
KFOYMQXIDOVWGR-AJQTZOPKSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM200201; PubChem:CID71499168
Local ready
Direct docking supported
E3L008124
BDB008124
BDBM200202
CCOc1ccc(C[C@@H](NC(=O)c2sccc2NC(C)=O)C(=O)N[C@@H](Cc2ccsc2)C(=O)NCc2ccc(CN)cc2)cc1
C33H37N5O5S2
647.823000
FQQAMJLKTANPGO-URLMMPGGSA-N P00748 Coagulation factor XII
BindingDB
BindingDB:BDBM200202
Local ready
Direct docking supported
E3L008125
BDB008125
BDBM200203
CCOc1ccc(C[C@@H](NC(=O)c2sccc2N)C(=O)N[C@@H](Cc2csc3ccccc23)C(=O)NCc2ccc(CN)cc2)cc1
C35H37N5O4S2
655.846000
CYVSDXJVCZURLD-IHLOFXLRSA-N P00748 Coagulation factor XII
BindingDB
BindingDB:BDBM200203
Local ready
Direct docking supported
E3L008126
BDB008126
BDBM200205
CCOc1ccc(C[C@@H](NC(=O)c2sccc2Cl)C(=O)N(C)[C@@H](Cc2ccccc2)C(=O)NCc2ccc(CN)cc2)cc1
C34H37ClN4O4S
633.214000
OQLWNLNQMCZSSV-IHLOFXLRSA-N P00748 Coagulation factor XII
BindingDB
BindingDB:BDBM200205
Local ready
Direct docking supported
E3L008127
BDB008127
BDBM200206
CCOc1ccc(C[C@@H](NC(=O)c2ccccc2)C(=O)N[C@H](C(=O)NCc2ccc(CN)cc2)[C@H](O)c2ccccc2)cc1
C35H38N4O5
594.712000
BCBPQVFOASQXEY-YKILCQELSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM200206; PubChem:CID71185740
Local ready
Direct docking supported
E3L008128
BDB008128
BDBM200207
CCOc1ccc(C[C@@H](NC(=O)c2sccc2Cl)C(=O)N[C@H](C(=O)NCc2ccc(CN)cc2)[C@H](O)c2ccccc2)cc1
C33H35ClN4O5S
635.186000
JPIQGCNQXOHJHE-SSBOKUKZSA-N P00748 Coagulation factor XII
BindingDB
BindingDB:BDBM200207
Local ready
Direct docking supported
E3L008129
BDB008129
BDBM200208
CCOc1ccc(C[C@@H](NC(=O)c2ccc(C)cc2)C(=O)N[C@@H](Cc2cccnc2)C(=O)NCc2ccc(CN)cc2)cc1
C35H39N5O4
593.728000
QLQUHMZRFARDGM-AJQTZOPKSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM200208; PubChem:CID71204163
Local ready
Direct docking supported
E3L008130
BDB008130
BDBM200210
NCc1ccc(CNC(=O)[C@H](Cc2ccccc2)NC(=O)C(Cc2ccc(OCC(F)(F)F)cc2)NC(=O)c2ccccc2)cc1
C35H35F3N4O4
632.683000
ZFMHHRGGDRODQQ-FSRLHOSWSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM200210; PubChem:CID71186113
Local ready
Direct docking supported
E3L008131
BDB008131
BDBM200235
CO[C@H]1/C=C/O[C@@]2(C)Oc3c(C)c(O)c4c(c3C2=O)C(=O)/C(=C/NN2CCN(C)CC2)C(=C4O)NC(=O)/C(C)=C\C=C\[C@H](C)[C@H](O)[C@@H](C)[C@@H](O)[C@@H](C)[C@H](OC(C)=O)[C@@H]1C
C43H58N4O12
822.953000
FZYOVNIOYYPUPY-ZTWDQPHTSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB
BindingDB:BDBM200235
Local ready
Direct docking supported
E3L008132
BDB008132
Ac-Gly-Arg-Ala-NH2
CC(=O)NCC(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](C)C(N)=O
C13H25N7O4
343.388000
BHLVCWTYTXZPGO-CBAPKCEASA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200641; PubChem:CID54767220
Local ready
Direct docking supported
E3L008133
BDB008133
Ac-Abu-Arg-Ala-NH2
CC[C@H](NC(C)=O)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](C)C(N)=O
C15H29N7O4
371.442000
IEGDMYALTXAMQA-LSJOCFKGSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200642; PubChem:CID54767221
Local ready
Direct docking supported
E3L008134
BDB008134
Ac-Val-Arg-Ala-NH2
CC(=O)N[C@H](C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](C)C(N)=O)C(C)C
C16H31N7O4
385.469000
DZOKAHIXJAQRES-DLOVCJGASA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200643; PubChem:CID54767222
Local ready
Direct docking supported
E3L008135
BDB008135
Ac-Cys-Arg-Ala-NH2
CC(=O)N[C@@H](CS)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](C)C(N)=O
C14H27N7O4S
389.482000
OVVJPALHWQFAGL-HGNGGELXSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200644; PubChem:CID54767223
Local ready
Direct docking supported
E3L008136
BDB008136
Ac-Leu-Arg-Ala-NH2
CC(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](C)C(N)=O
C17H33N7O4
399.496000
CKROJUIYKBYBDV-DRZSPHRISA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200645; PubChem:CID54767224
Local ready
Direct docking supported
E3L008137
BDB008137
Ac-Chg-Arg-Ala-NH2
CC(=O)N[C@H](C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](C)C(N)=O)C1CCCCC1
C19H35N7O4
425.534000
KHCYWWFFBAFJJK-CQDKDKBSSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200646; PubChem:CID54767387
Local ready
Direct docking supported
E3L008138
BDB008138
Ac-His-Arg-Ala-NH2
CC(=O)N[C@@H](Cc1c[nH]cn1)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](C)C(N)=O
C17H29N9O4
423.478000
PDMJSANQUMISRI-XDTLVQLUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200647; PubChem:CID54767388
Local ready
Direct docking supported
E3L008139
BDB008139
Ac-Phe-Arg-Ala-NH2
CC(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](C)C(N)=O
C20H31N7O4
433.513000
CZPHQNDUCHJWLZ-RCBQFDQVSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200648; PubChem:CID54767389
Local ready
Direct docking supported
E3L008140
BDB008140
Ac-Ser-Arg-Ala-NH2
CC(=O)N[C@@H](CO)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](C)C(N)=O
C14H27N7O5
373.414000
BSVZIBKNHOCVGU-HGNGGELXSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200649; PubChem:CID54767393
Local ready
Direct docking supported