E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L008321
BDB008321
BDBM206026
C[C@@H]1Cc2c([nH]c3ccccc23)[C@@H](c2cnc(N3CCC4(CC3)CC(CN3CCC(c5ccc6c(c5)n(C)c(=O)n6C5CCC(=O)NC5=O)CC3)C4)nc2)N1CC(F)F
C45H53F2N9O3
805.975000
KIRYOWGBLGLINP-BNTARQHMSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206026
Local ready
Direct docking supported
E3L008322
BDB008322
BDBM206027
COc1cc(N2CCC(CN3CCC4(CC3)COc3cc5c(cc34)CN(C3CCC(=O)NC3=O)C5=O)CC2)ccc1[C@@H]1c2[nH]c3ccccc3c2C[C@@H](C)N1CC(F)F
C46H52F2N6O5
806.955000
JIQQCYWIYSAICS-VPTXLVNASA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206027
Local ready
Direct docking supported
E3L008323
BDB008323
BDBM206028
COc1cc(N2CCC(CN3CCC(c4ccc(N[C@H]5CCC(=O)NC5=O)cc4F)CC3)CC2)ccc1[C@@H]1c2[nH]c3ccccc3c2C[C@@H](C)N1CC(F)F
C43H51F3N6O3
756.914000
HQOQXUHKLUVJIL-NYJMODBESA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206028
Local ready
Direct docking supported
E3L008324
BDB008324
BDBM206029
COc1cc(N2CCC(CN3CCN(c4ccc(NC5CCC(=O)NC5=O)cc4F)CC3)CC2)ccc1[C@@H]1c2[nH]c3ccccc3c2C[C@@H](C)N1CC(F)F
C42H50F3N7O3
757.902000
HPHUKWYNBMSJEN-WCHUVLJBSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206029
Local ready
Direct docking supported
E3L008325
BDB008325
BDBM206030
C[C@@H]1Cc2c([nH]c3ccccc23)[C@@H](c2cnc(N3CCC(CN4CCC5(CC4)COc4cc6c(cc45)CN(C4CCC(=O)NC4=O)C6=O)CC3)nc2)N1CC(F)(F)CO
C44H50F2N8O5
808.931000
RNFIEXJKUWCZCC-CHVIFGTFSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206030
Local ready
Direct docking supported
E3L008326
BDB008326
BDBM206031
COc1cc(N2CCC(CN3CCN4c5ccc6c(c5OC[C@H]4C3)CN([C@@H]3CCC(=O)NC3=O)C6=O)CC2)ccc1[C@@H]1c2[nH]c3ccccc3c2C[C@@H](C)N1CC(F)F
C45H51F2N7O5
807.943000
WJHSKRHFCXEXIR-BBUZMEHDSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206031
Local ready
Direct docking supported
E3L008327
BDB008327
BDBM206032
C[C@@H]1Cc2c([nH]c3ccccc23)[C@@H](c2cnc(N3CCN(CC4CCN(c5ccc(N6CCC(=O)NC6=O)cc5)CC4)CC3)nc2)N1CC(F)F
C38H45F2N9O2
697.835000
RABAFWIHYJUOOX-BWXVZPLGSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206032
Local ready
Direct docking supported
E3L008328
BDB008328
BDBM206033
COc1cc(N2CCC(CN3CCN4c5ccc6c(c5OC[C@H]4C3)CN([C@H]3CCC(=O)NC3=O)C6=O)CC2)ccc1[C@H]1c2[nH]c3ccccc3c2C[C@@H](C)N1CC(F)F
C45H51F2N7O5
807.943000
WJHSKRHFCXEXIR-QLFATSAFSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206033
Local ready
Direct docking supported
E3L008329
BDB008329
BDBM206034
COc1cc(N2CCC(CN3CCC(c4ccc(N[C@H]5CCC(=O)NC5=O)c(F)c4)CC3)CC2)ccc1[C@@H]1c2[nH]c3ccccc3c2C[C@@H](C)N1CC(F)F
C43H51F3N6O3
756.914000
GYVVNFGCGAREKN-NYJMODBESA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206034
Local ready
Direct docking supported
E3L008330
BDB008330
BDBM206035
COc1cc(N2CCC(CN3CCN(c4ccc(NC5CCC(=O)NC5=O)c(F)c4)CC3)CC2)ccc1[C@@H]1c2[nH]c3ccccc3c2C[C@@H](C)N1CC(F)F
C42H50F3N7O3
757.902000
AKUMKBYUJBNBSB-PZGDJNGXSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206035
Local ready
Direct docking supported
E3L008331
BDB008331
BDBM206036
COc1cc(N2CCC(CN3CCN4c5ccc6c(c5OC[C@@H]4C3)CN([C@@H]3CCC(=O)NC3=O)C6=O)CC2)ccc1[C@@H]1c2[nH]c3ccccc3c2C[C@@H](C)N1CC(F)F
C45H51F2N7O5
807.943000
WJHSKRHFCXEXIR-GYNQPNTFSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206036
Local ready
Direct docking supported
E3L008332
BDB008332
BDBM206037
COc1cc(N2CCC(CN3CCN(c4ccc(C(=O)N[C@H]5CCC(=O)NC5=O)nc4)CC3)CC2)ccc1[C@@H]1c2[nH]c3ccccc3c2C[C@@H](C)N1CC(F)F
C42H50F2N8O4
768.910000
OYMOSSFRFJBEGC-BIJHJSMCSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206037
Local ready
Direct docking supported
E3L008333
BDB008333
BDBM206038
COc1cc(N2CCC(CN3CCN4c5cc6c(cc5OC[C@@H]4C3)C(=O)N([C@@H]3CCC(=O)NC3=O)C6)CC2)ccc1[C@H]1c2[nH]c3ccccc3c2C[C@H](C)N1CC(F)F
C45H51F2N7O5
807.943000
ZHTPIQFRAPUAAQ-MIRUVJISSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206038
Local ready
Direct docking supported
E3L008334
BDB008334
BDBM206041
COc1cc(N2CCC(CN3CCN4c5ccc6c(c5OC[C@@H]4C3)CN([C@H]3CCC(=O)NC3=O)C6=O)CC2)ccc1[C@@H]1c2[nH]c3ccccc3c2C[C@@H](C)N1CC(F)F
C45H51F2N7O5
807.943000
WJHSKRHFCXEXIR-NEOCNPILSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206041
Local ready
Direct docking supported
E3L008335
BDB008335
BDBM206042
COc1cc(N2CCC(CN3CCN(c4ccc(C5CCC(=O)NC5=O)cc4)CC3)CC2)ccc1[C@@H]1c2[nH]c3ccccc3c2C[C@@H](C)N1CC(F)F
C42H50F2N6O3
724.897000
JFMHDGSSQOZYFW-KREQAABHSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206042
Local ready
Direct docking supported
E3L008336
BDB008336
BDBM206043
COc1cc(N2CCC(CN3CCN4c5cc6c(cc5OC[C@@H]4C3)C(=O)N([C@@H]3CCC(=O)NC3=O)C6)CC2)ccc1[C@@H]1c2[nH]c3ccccc3c2C[C@@H](C)N1CC(F)F
C45H51F2N7O5
807.943000
ZHTPIQFRAPUAAQ-URGLSUMQSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206043
Local ready
Direct docking supported
E3L008337
BDB008337
BDBM206046
COc1cc(N2CCC(CN3CCN4c5cc6c(cc5OC[C@H]4C3)C(=O)N([C@@H]3CCC(=O)NC3=O)C6)CC2)ccc1[C@@H]1c2[nH]c3ccccc3c2C[C@@H](C)N1CC(F)F
C45H51F2N7O5
807.943000
ZHTPIQFRAPUAAQ-MGYMTXTNSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206046
Local ready
Direct docking supported
E3L008338
BDB008338
BDBM206048
COc1cc(N2CCC(CN3CCN4c5ccc6c(c5OC[C@H]4C3)CN([C@H]3CCC(=O)NC3=O)C6=O)CC2)ccc1[C@@H]1c2[nH]c3ccccc3c2C[C@@H](C)N1CC(C)(C)F
C47H56FN7O5
818.007000
AEBNLOFIJHRQAU-QHRXRKQCSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206048
Local ready
Direct docking supported
E3L008339
BDB008339
BDBM206050
COc1cc(N2CCC3(CCN(C(=O)CN4Cc5cnc(C(=O)N[C@H]6CCC(=O)NC6=O)cc5C4)CC3)CC2)ccc1[C@@H]1c2[nH]c3ccccc3c2CCN1CC(C)F
C45H53FN8O5
804.968000
SLSOWOBXZVNTTI-RYYSVFADSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206050
Local ready
Direct docking supported
E3L008340
BDB008340
BDBM206052
COc1cc(N2CCC(CN3CCN4c5ccc(C(=O)NC6CCC(=O)NC6=O)nc5OC[C@H]4C3)CC2)ccc1[C@@H]1c2[nH]c3ccccc3c2C[C@@H](C)N1CC(F)F
C43H50F2N8O5
796.920000
VPOZGRAOIJNXPP-OOZCVECZSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM206052
Local ready
Direct docking supported