E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L012761
BDB012761
US10022354, Example 15
CC(C)c1cc(C(=O)N2CCC(C)(NC(=O)C3CC3)C2)[nH]n1
C16H24N4O2
304.394000
YEEJGGRVBMZQIM-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281075; PubChem:CID121279558
Local ready
Direct docking supported
E3L012762
BDB012762
US10022354, Example 16
CC(O)c1cc(C(=O)N2CCC(NC(=O)C3CC3)C2)[nH]n1
C14H20N4O3
292.339000
BTJVSAZWYBYVMF-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281076; PubChem:CID121279556
Local ready
Direct docking supported
E3L012763
BDB012763
US10022354, Example 17
CC(F)c1cc(C(=O)N2CCC(NC(=O)C3CC3)C2)[nH]n1
C14H19FN4O2
294.330000
QQMIHOOJONAZBL-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281077; PubChem:CID121279554
Local ready
Direct docking supported
E3L012764
BDB012764
US10022354, Example 18
CC(C)(O)c1cc(C(=O)N2CCC(NC(=O)C3CC3)C2)[nH]n1
C15H22N4O3
306.366000
HRMNYZNGIGQSHN-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281078; PubChem:CID121279553
Local ready
Direct docking supported
E3L012765
BDB012765
US10022354, Example 19
CC(C)n1cnc(C(=O)N2CCC(NC(=O)C3CC3)C2)c1
C15H22N4O2
290.367000
KJIYDGWGFFUQNB-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281079; PubChem:CID121279557
Local ready
Direct docking supported
E3L012766
BDB012766
US10022354, Example 20
O=C(NC1CCN(C(=O)c2cc(Cc3ccccc3)n[nH]2)C1)C1CC1
C19H22N4O2
338.411000
GYFJARJZWMHMPM-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281080; PubChem:CID132054558
Local ready
Direct docking supported
E3L012767
BDB012767
US10022354, Example 21
CC(c1ccccc1)c1cc(C(=O)N2CCC(NC(=O)C3CC3)C2)[nH]n1
C20H24N4O2
352.438000
LOMLYOKDYCDLLB-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281081; PubChem:CID132054541
Local ready
Direct docking supported
E3L012768
BDB012768
US10022354, Example 22
CC(CCCc1ccccc1)c1cc(C(=O)N2CCC(NC(=O)C3CC3)C2)n[nH]1
C23H30N4O2
394.519000
XRCCYPSLTYKAIY-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281082; PubChem:CID121279561
Local ready
Direct docking supported
E3L012769
BDB012769
US10022354, Example 23
CCC(C)c1cc(C(=O)N2CCC(NC(=O)C3CC3)C2)[nH]n1
C16H24N4O2
304.394000
GMRBHAFJFIZANH-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281083; PubChem:CID121279559
Local ready
Direct docking supported
E3L012770
BDB012770
US10022354, Example 24
CC(c1cc(C(=O)N2CCC(NC(=O)C3CC3)C2)[nH]n1)C(F)(F)F
C15H19F3N4O2
344.337000
BLHNGKLPLIQTCL-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281084; PubChem:CID132054533
Local ready
Direct docking supported
E3L012771
BDB012771
US10022354, Example 25
COCC(C)c1cc(C(=O)N2CCC(NC(=O)C3CC3)C2)[nH]n1
C16H24N4O3
320.393000
MGUMFMQACXTQMO-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281085; PubChem:CID121279562
Local ready
Direct docking supported
E3L012772
BDB012772
US10022354, Example 26
CC(C)Oc1cc(C(=O)N2CCC(NC(=O)C3CC3)C2)[nH]n1
C15H22N4O3
306.366000
VWZRKGKGLIJSPL-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281086; PubChem:CID132054531
Local ready
Direct docking supported
E3L012773
BDB012773
US10022354, Example 27
CC(=O)NC1CCN(C(=O)c2cc(C(C)C)n[nH]2)C1
C13H20N4O2
264.329000
VJWRGFIQVSUBPB-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281087; PubChem:CID121279544
Local ready
Direct docking supported
E3L012774
BDB012774
BDBM281088
CC(C)c1cc(C(=O)N2CC[C@H](NC(=O)C3CC3)C2)[nH]n1
C15H22N4O2
290.367000
CXEXTVGTDZRKJS-NSHDSACASA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281088; PubChem:CID129606887
Local ready
Direct docking supported
E3L012775
BDB012775
Kdm5A-IN-1
CC(C)c1cc(C(=O)N2CC[C@@H](NC(=O)C3CC3)C2)[nH]n1
C15H22N4O2
290.367000
CXEXTVGTDZRKJS-LLVKDONJSA-N P29375, P41229, Q8NHM5 Lysine-specific demethylase 5A, Lysine-specific demethylase 5C, Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM281089; PubChem:CID119081409
Local ready
Direct docking supported
E3L012776
BDB012776
US10022354, Example 30
CC(C)c1cc(C(=O)N2CCC(N3Cc4ccccc4C3=O)C2)[nH]n1
C19H22N4O2
338.411000
NAXTVRAEMKWIHX-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281090; PubChem:CID132054536
Local ready
Direct docking supported
E3L012777
BDB012777
US10022354, Example 115
COC(=O)NC1CCN(C(=O)c2cc(C(C)C)n[nH]2)C1
C13H20N4O3
280.328000
GXQMLAWTGOHRJK-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281091; PubChem:CID121279560
Local ready
Direct docking supported
E3L012778
BDB012778
US10022354, Example 116
CC(C)c1cc(C(=O)N2CCC(NC(=O)Oc3ccccc3)C2)[nH]n1
C18H22N4O3
342.399000
BCHKYQYRPXVIDZ-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281092; PubChem:CID121279555
Local ready
Direct docking supported
E3L012779
BDB012779
US10022354, Example 33
CC(C)c1cc(C(=O)N2CCC(NC(=O)NC3CC3)C2)[nH]n1
C15H23N5O2
305.382000
WNSMPEBHTSITSG-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281093; PubChem:CID132054554
Local ready
Direct docking supported
E3L012780
BDB012780
US10022354, Example 34
CNC(=O)NC1CCN(C(=O)c2cc(C(C)C)n[nH]2)C1
C13H21N5O2
279.344000
QSZJKTWEBCXRJQ-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM281094; PubChem:CID121279679
Local ready
Direct docking supported