E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L013761
BDB013761
US9603889, Example 3
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CC(NC(=O)c2ccc(CN(C(=O)[C@@H]3Cc4ccccc4CN3C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)[C@H](C)c3cccc(OC)c3)cc2)C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C62H83N9O8
1082.401000
MCROMBFXBQBUQE-MSMLPYSUSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM312091; PubChem:CID138106615
Local ready
Direct docking supported
E3L013762
BDB013762
US9603889, Example 4
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](NC(=O)c2ccc(CN(C(=O)[C@@H]3Cc4ccccc4CN3C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)[C@H](C)c3ccc(F)cc3)cc2)C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C61H80FN9O7
1070.365000
VIZNQQUAZMRASA-DNDJARQFSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM312092; PubChem:CID73603551
Local ready
Direct docking supported
E3L013763
BDB013763
US9603889, Example 5
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](NC(=O)c2ccc(CN(C(=O)[C@@H]3Cc4ccccc4CN3C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)[C@H](C)c3ccccc3Cl)cc2)C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C61H80ClN9O7
1086.820000
JUQLTUQEOXZVES-NQFXVQPCSA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3
BindingDB, PubChem
BindingDB:BDBM312093; PubChem:CID73603595
Local ready
Direct docking supported
E3L013764
BDB013764
US9603889, Example 6
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](NC(=O)c2ccc(CN(C(=O)[C@@H]3Cc4ccccc4CN3C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)[C@H](C)c3cccc(F)c3F)cc2)C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C61H79F2N9O7
1088.355000
XKVHXUXRQUCUTL-ZJDZNGFLSA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3
BindingDB, PubChem
BindingDB:BDBM312094; PubChem:CID73603596
Local ready
Direct docking supported
E3L013765
BDB013765
US9603889, Example 7
CCC[C@H](c1ccccc1)N(Cc1ccc(C(=O)N[C@H]2C[C@@H](C(=O)N[C@@H]3CCCc4ccccc43)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C2)cc1)C(=O)[C@@H]1Cc2ccccc2CN1C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C
C63H85N9O7
1080.429000
CXWIRGMWNKKYDO-HRRNLFNOSA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3
BindingDB, PubChem
BindingDB:BDBM312095; PubChem:CID73603640
Local ready
Direct docking supported
E3L013766
BDB013766
US9603889, Example 9
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](NC(=O)n2ccc3cc(CN(C(=O)[C@@H]4Cc5ccccc5CN4C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)[C@@H](COC)c4ccccc4)ccc32)C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C64H84N10O8
1121.438000
OYWRLKDYLPPCDX-DKCQCBDISA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3
BindingDB, PubChem
BindingDB:BDBM312097; PubChem:CID118323245
Local ready
Direct docking supported
E3L013767
BDB013767
US9603889, Example 10
CN[C@@H](C)C(=O)N[C@H](C(=O)N1Cc2ccccc2C[C@H]1CN(CCc1ccccc1)C(=O)c1ccc(C(=O)N[C@H]2C[C@@H](C(=O)N[C@@H]3CCCc4ccccc43)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C2)cc1)C(C)(C)C
C61H81N9O7
1052.375000
OXYMRWGLDAHNRS-PIJVGMIXSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM312099; PubChem:CID73603685
Local ready
Direct docking supported
E3L013768
BDB013768
US9603889, Example 11
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CC(NC(=O)c2ccc(CN(Cc3cccc(Cl)c3Cl)C(=O)[C@@H]3Cc4ccccc4CN3C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)cc2)C[C@H]1C(=O)NC1CCCc2ccccc21)C(C)(C)C
C60H77Cl2N9O7
1107.238000
UFRZPIWCZFNHSK-ASCDQIFNSA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3
BindingDB, PubChem
BindingDB:BDBM312100; PubChem:CID138106617
Local ready
Direct docking supported
E3L013769
BDB013769
US9603889, Example 12
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CC(NC(=O)c2ccc(CN(CCc3ccc4ccccc4c3)C(=O)[C@@H]3Cc4ccccc4CN3C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)cc2)C[C@H]1C(=O)NC1CCCc2ccccc21)C(C)(C)C
C65H83N9O7
1102.435000
WFUUBVXJSSGEKN-SZKORNPESA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM312101; PubChem:CID138106618
Local ready
Direct docking supported
E3L013770
BDB013770
US9603889, Example 13
CN[C@@H](C)C(=O)NC(C(=O)N1Cc2ccccc2C[C@H]1C(=O)N(Cc1ccccc1)Cc1ccc(C(=O)NC2C[C@@H](C(=O)NC3CCCc4ccccc43)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C2)cc1)C(C)(C)C
C60H79N9O7
1038.348000
SCYPULPKNVKNQH-NJPRNJCPSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM312102; PubChem:CID138106619
Local ready
Direct docking supported
E3L013771
BDB013771
US9603889, Example 14
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CC(NC(=O)c2ccc(CN(Cc3ccc4ccccc4c3)C(=O)[C@@H]3Cc4ccccc4CN3C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)cc2)C[C@H]1C(=O)NC1CCCc2ccccc21)C(C)(C)C
C64H81N9O7
1088.408000
RQSQGPVQOJIACV-APJIPKEOSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM312103; PubChem:CID138106620
Local ready
Direct docking supported
E3L013772
BDB013772
US9603889, Example 15
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CC(NC(=O)c2ccc(CN(C(=O)[C@@H]3Cc4ccccc4CN3C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)[C@H](C)c3ccc4ccccc4c3)cc2)C[C@H]1C(=O)NC1CCCc2ccccc21)C(C)(C)C
C65H83N9O7
1102.435000
HGRBQHLSCJMBBG-ZTKZYTAPSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM312104; PubChem:CID138106621
Local ready
Direct docking supported
E3L013773
BDB013773
US9603889, Example 16
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CCc2ccccc2[C@H]1C(=O)N(CCc1ccccc1)Cc1ccc(C(=O)NC2C[C@@H](C(=O)NC3CCCc4ccccc43)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C2)cc1)C(C)(C)C
C61H81N9O7
1052.375000
VPPOJCROUNMKKO-QOULSCCGSA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3
BindingDB, PubChem
BindingDB:BDBM312105; PubChem:CID138106622
Local ready
Direct docking supported
E3L013774
BDB013774
US9603889, Example 17
CN[C@@H](C)C(=O)N[C@H](C(=O)N1Cc2ccccc2C[C@H]1CN(C(=O)c1ccc(C(=O)N[C@H]2C[C@@H](C(=O)N[C@@H]3CCCc4ccccc43)N(C(=O)[C@@H](NC(=O)[C@@H](C)NC)C(C)(C)C)C2)cc1)[C@H](C)Cc1ccccc1F)C(C)(C)C
C62H82FN9O7
1084.392000
QCAMDWZORZRYMM-XRTXGEDASA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM312106; PubChem:CID118330703
Local ready
Direct docking supported
E3L013775
BDB013775
US9603889, Example 18
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CC(NC(=O)c2ccc(CN(C(=O)[C@@H]3Cc4ccccc4CN3C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C(C)c3cccc(Cl)c3)cc2)C[C@H]1C(=O)NC1CCCc2ccccc21)C(C)(C)C
C61H80ClN9O7
1086.820000
HQFKHRXXASCMRM-PJYHSPRCSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM312107; PubChem:CID138106623
Local ready
Direct docking supported
E3L013776
BDB013776
US9603889, Example 19
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CCc2ccccc2[C@H]1C(=O)N(Cc1ccc(C(=O)NC2C[C@@H](C(=O)NC3CCCc4ccccc43)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C2)cc1)[C@H](C)c1ccccc1F)C(C)(C)C
C61H80FN9O7
1070.365000
OJMRKFRVXDLLRT-ZODIYHDXSA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3
BindingDB, PubChem
BindingDB:BDBM312108; PubChem:CID138106624
Local ready
Direct docking supported
E3L013777
BDB013777
US9603889, Example 20
CCC(c1ccccc1)N(Cc1ccc(C(=O)NC2C[C@@H](C(=O)NC3CCCc4ccccc43)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C2)cc1)C(=O)[C@@H]1Cc2ccccc2CN1C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C
C62H83N9O7
1066.402000
CWBSLRMZMMYANP-FSSCPAOLSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM312109; PubChem:CID138106625
Local ready
Direct docking supported
E3L013778
BDB013778
US9603889, Example 21
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CC(NC(=O)c2ccc(CN(C(=O)[C@@H]3Cc4ccccc4CN3C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C(C)C(c3ccccc3)c3ccccc3)cc2)C[C@H]1C(=O)NC1CCCc2ccccc21)C(C)(C)C
C68H87N9O7
1142.500000
CYHTUCVQCYTOFX-LRGHKLHQSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM312110; PubChem:CID138106626
Local ready
Direct docking supported
E3L013779
BDB013779
US9603889, Example 22
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CC(NC(=O)c2ccc(CN(C(=O)[C@@H]3Cc4ccccc4CN3C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C3CCCc4ccccc43)cc2)C[C@H]1C(=O)NC1CCCc2ccccc21)C(C)(C)C
C63H83N9O7
1078.413000
LDVMHSURAWAEBW-IBHSQVJQSA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3
BindingDB, PubChem
BindingDB:BDBM312111; PubChem:CID138106627
Local ready
Direct docking supported
E3L013780
BDB013780
US9603889, Example 23
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CC(NC(=O)c2ccc(CN(C(=O)[C@@H]3Cc4ccccc4CN3C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C(C)c3ccccc3)cc2)C[C@H]1C(=O)NC1CCCc2ccccc21)C(C)(C)C
C61H81N9O7
1052.375000
CLXWWRLIDSQWAQ-PBDLGBDGSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM312112; PubChem:CID138106628
Local ready
Direct docking supported