E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L017001
BDB017001
US10273222, Example 71
O=C(O)c1ccnc(-c2cn(CCN(Cc3ccc(F)cc3)C3CC3)cn2)c1
C21H21FN4O2
380.423000
SGSDGKOZKXKUJL-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 5A, Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382011; PubChem:CID85470886
Local ready
Direct docking supported
E3L017002
BDB017002
US10273222, Example 72
O=C(O)c1ccnc(-c2cn(CCNCC3CCC(F)(F)CC3)cn2)c1
C18H22F2N4O2
364.396000
LINOVANVVSYFAN-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 2B, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM382012; PubChem:CID90407508
Local ready
Direct docking supported
E3L017003
BDB017003
US10273222, Example 73
O=C(O)c1ccnc(-c2cn(CCNCC3CC(F)(F)C3)cn2)c1
C16H18F2N4O2
336.342000
QVDRDNVABMUEIS-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 5A, Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382013; PubChem:CID90407315
Local ready
Direct docking supported
E3L017004
BDB017004
US10273222, Example 74
O=C(O)c1ccnc(-c2cn(CCNCc3ccc(F)cc3)cn2)c1
C18H17FN4O2
340.358000
AVCRDDXMLCGJOG-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 2B, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM382014; PubChem:CID90407164
Local ready
Direct docking supported
E3L017005
BDB017005
US10273222, Example 75
O=C(O)c1ccnc(-c2cn(CCNCc3ccccc3C(F)(F)F)cn2)c1
C19H17F3N4O2
390.365000
OQLLMIKQRVHOSV-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM382015; PubChem:CID90407311
Local ready
Direct docking supported
E3L017006
BDB017006
US10273222, Example 76
O=C(O)c1ccnc(-c2cn(CCN3Cc4ccccc4C3)cn2)c1
C19H18N4O2
334.379000
HCQJMYQADHVXJR-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 5A, Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382016; PubChem:CID90407046
Local ready
Direct docking supported
E3L017007
BDB017007
US10273222, Example 77
COc1ccccc1CNCCn1cnc(-c2cc(C(=O)O)ccn2)c1
C19H20N4O3
352.394000
HNCSOLMMKKZZJS-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 5A, Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382017; PubChem:CID90406604
Local ready
Direct docking supported
E3L017008
BDB017008
US10273222, Example 78
O=C(O)c1ccnc(-c2cn(CCNCc3ccccc3Cl)cn2)c1
C18H17ClN4O2
356.813000
HXFAEJNSXYWOET-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 5A, Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382018; PubChem:CID90407377
Local ready
Direct docking supported
E3L017009
BDB017009
US10273222, Example 79
O=C(O)c1ccnc(-c2cn(CCN3Cc4ccc(F)cc4C3)cn2)c1
C19H17FN4O2
352.369000
ZGPYPJSEAHWBHB-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 5A, Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382019; PubChem:CID90406725
Local ready
Direct docking supported
E3L017010
BDB017010
US10273222, Example 80
CCc1ccccc1CNCCn1cnc(-c2cc(C(=O)O)ccn2)c1
C20H22N4O2
350.422000
MXDWGKFISZYZNE-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 5A, Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382020; PubChem:CID90407148
Local ready
Direct docking supported
E3L017011
BDB017011
US10273222, Example 81
O=C(O)c1ccnc(-c2cn(CCN3Cc4cccc(Cl)c4C3)cn2)c1
C19H17ClN4O2
368.824000
BXYJBQPBSKKOAB-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 2B, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM382021; PubChem:CID90407042
Local ready
Direct docking supported
E3L017012
BDB017012
US10273222, Example 82
O=C(O)c1ccnc(-c2cn(CCN3Cc4ccc(Cl)cc4C3)cn2)c1
C19H17ClN4O2
368.824000
UYWBZRYCSOAEIC-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 2B, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM382022; PubChem:CID90408009
Local ready
Direct docking supported
E3L017013
BDB017013
US10273222, Example 83
N#Cc1cccc2c1CN(CCn1cnc(-c3cc(C(=O)O)ccn3)c1)C2
C20H17N5O2
359.389000
LAEIVQMOCJOJOW-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 5A, Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382023; PubChem:CID90407237
Local ready
Direct docking supported
E3L017014
BDB017014
US10273222, Example 84
O=C(O)c1ccnc(-c2cn(CCN3Cc4ccc(C(F)(F)F)cc4C3)cn2)c1
C20H17F3N4O2
402.376000
MBCNXHQXPLPFAW-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 2B, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM382024; PubChem:CID90407344
Local ready
Direct docking supported
E3L017015
BDB017015
US10273222, Example 85
O=C(O)c1ccnc(-c2cn(CCN(Cc3ccc(Cl)cc3)C3CC3)cn2)c1
C21H21ClN4O2
396.878000
QMWNMEXTTOKHRE-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 2B, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM382025; PubChem:CID90407266
Local ready
Direct docking supported
E3L017016
BDB017016
US10273222, Example 86
O=C(O)c1ccnc(-c2cn(CCN(Cc3ccc(Cl)c(Cl)c3)C3CC3)cn2)c1
C21H20Cl2N4O2
431.323000
BBESHVKYJDBNOB-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 5A, Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382026; PubChem:CID90407145
Local ready
Direct docking supported
E3L017017
BDB017017
US10273222, Example 87
CN(CCn1cnc(-c2cc(C(=O)O)ccn2)c1)c1ccc(Cl)cc1
C18H17ClN4O2
356.813000
LYECZDRRRZNARD-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 2B, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM382027; PubChem:CID86269079
Local ready
Direct docking supported
E3L017018
BDB017018
US10273222, Example 88
O=C(O)c1ccnc(-c2cn(CCN3CCCc4ccccc43)cn2)c1
C20H20N4O2
348.406000
XSSUXYYELFOOBB-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 2B, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM382028; PubChem:CID86269080
Local ready
Direct docking supported
E3L017019
BDB017019
US10273222, Example 89
O=C(O)c1ccnc(-c2cn(CCN3CCCc4cc(Cl)ccc43)cn2)c1
C20H19ClN4O2
382.851000
HNQJHFKEFOZLKD-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 2B, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM382029; PubChem:CID86269081
Local ready
Direct docking supported
E3L017020
BDB017020
US10273222, Example 90
O=C(O)c1ccnc(-c2cn(CCN3CCCc4cc(F)ccc43)cn2)c1
C20H19FN4O2
366.396000
HFKOFUFQGTVMPB-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 2B, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM382030; PubChem:CID86269082
Local ready
Direct docking supported