E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L017061
BDB017061
BDBM382071
Clc1ccc(-c2c(-c3cc(-c4nn[nH]n4)ccn3)ncn2CCc2ccccc2Cl)cc1
C23H17Cl2N7
462.344000
WGXLMGBZJXLXOA-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382071; PubChem:CID90407500
Local ready
Direct docking supported
E3L017062
BDB017062
BDBM382072
Fc1ccc(-c2c(-c3cc(-c4nn[nH]n4)ccn3)ncn2CC(F)(F)F)cc1
C17H11F4N7
389.316000
YPXMBUYRTBIECY-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382072; PubChem:CID90407556
Local ready
Direct docking supported
E3L017063
BDB017063
BDBM382073
Fc1ccc(-c2c(-c3cc(-c4nn[nH]n4)ccn3)ncn2CC2CC2)cc1
C19H16FN7
361.384000
KCJJYCIVFYDIRB-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382073; PubChem:CID90406682
Local ready
Direct docking supported
E3L017064
BDB017064
BDBM382074
Clc1ccc(-c2c(-c3cc(-c4nn[nH]n4)ccn3)ncn2CC2CC2)cc1
C19H16ClN7
377.839000
SVBPSIGYLVRIFY-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382074; PubChem:CID90407443
Local ready
Direct docking supported
E3L017065
BDB017065
BDBM382075
Fc1ccc(-c2c(-c3cc(-c4nn[nH]n4)ccn3)ncn2Cc2ccccc2Cl)cc1
C22H15ClFN7
431.862000
BRSDWTFJHHGKFU-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382075; PubChem:CID90407363
Local ready
Direct docking supported
E3L017066
BDB017066
US10273222, Example 138
CC(=O)OCn1nnc(-c2ccnc(-c3ncn(Cc4ccccc4Cl)c3-c3ccc(F)cc3)c2)n1
C25H19ClFN7O2
503.925000
HTJVSOKFRYKNCQ-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382076; PubChem:CID90407317
Local ready
Direct docking supported
E3L017067
BDB017067
US10273222, Example 139
CC(C)(C)C(=O)OCn1nnc(-c2ccnc(-c3ncn(Cc4ccccc4Cl)c3-c3ccc(F)cc3)c2)n1
C28H25ClFN7O2
546.006000
UEEKEMKOZUPLBE-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382077; PubChem:CID90407289
Local ready
Direct docking supported
E3L017068
BDB017068
BDBM382078
FC(F)(F)c1ccccc1CCn1cnc(-c2cc(-c3nn[nH]n3)ccn2)c1
C18H14F3N7
385.353000
HVUATMMGHIDJOR-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 2B, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM382078; PubChem:CID90407209
Local ready
Direct docking supported
E3L017069
BDB017069
BDBM382079
Clc1ccccc1CCn1cnc(-c2cc(-c3nn[nH]n3)ccn2)c1
C17H14ClN7
351.801000
MWBHFQQDMCLDJK-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 2B, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM382079; PubChem:CID90407276
Local ready
Direct docking supported
E3L017070
BDB017070
BDBM382080
c1ccc2c(CCn3cnc(-c4cc(-c5nn[nH]n5)ccn4)c3)cccc2c1
C21H17N7
367.416000
QXFLDYAUTAKVLB-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382080; PubChem:CID90407709
Local ready
Direct docking supported
E3L017071
BDB017071
BDBM382081
c1ccc2c(c1)CCCC2Cn1cnc(-c2cc(-c3nn[nH]n3)ccn2)c1
C20H19N7
357.421000
AHJAGGVQXVXBBG-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382081; PubChem:CID90408224
Local ready
Direct docking supported
E3L017072
BDB017072
BDBM382082
CCC(c1ccccc1)n1cnc(-c2cc(-c3nn[nH]n3)ccn2)c1
C18H17N7
331.383000
RFGNJZHABKKPLK-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 5A, Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382082; PubChem:CID90408135
Local ready
Direct docking supported
E3L017073
BDB017073
BDBM382083
CC(C)C(c1ccccc1)n1cnc(-c2cc(-c3nn[nH]n3)ccn2)c1
C19H19N7
345.410000
RNHDGJROFDMRJA-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 2B, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM382083; PubChem:CID90406597
Local ready
Direct docking supported
E3L017074
BDB017074
BDBM382084
c1ccc2c(c1)CCC(Cn1cnc(-c3cc(-c4nn[nH]n4)ccn3)c1)C2
C20H19N7
357.421000
BPQJRTYHBQULJV-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382084; PubChem:CID90407403
Local ready
Direct docking supported
E3L017075
BDB017075
BDBM382085
c1ccc2c(c1)CC(Cn1cnc(-c3cc(-c4nn[nH]n4)ccn3)c1)C2
C19H17N7
343.394000
AEINLPGZMRICQO-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382085; PubChem:CID90407410
Local ready
Direct docking supported
E3L017076
BDB017076
BDBM382086
Cn1cnc(-c2cc(-c3nn[nH]n3)ccn2)c1-c1ccc(F)cc1OCc1ccccc1
C23H18FN7O
427.443000
MTWDWEAIUXPPFE-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382086; PubChem:CID90407309
Local ready
Direct docking supported
E3L017077
BDB017077
BDBM382087
CCCCOc1cc(F)ccc1-c1c(-c2cc(-c3nn[nH]n3)ccn2)ncn1C
C20H20FN7O
393.426000
HWLLTDBRLRZLGC-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382087; PubChem:CID90407415
Local ready
Direct docking supported
E3L017078
BDB017078
BDBM382088
Cn1cnc(-c2cc(-c3nn[nH]n3)ccn2)c1-c1ccc(F)cc1OCC1CC1
C20H18FN7O
391.410000
UNPSHKPWHBDUJV-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 2B, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM382088; PubChem:CID90407597
Local ready
Direct docking supported
E3L017079
BDB017079
BDBM382089
Clc1cccc(Cl)c1Cn1cnc(-c2cc(-c3nn[nH]n3)ccn2)c1
C16H11Cl2N7
372.219000
KJLMDBQYMBVZGL-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382089; PubChem:CID90406849
Local ready
Direct docking supported
E3L017080
BDB017080
BDBM382090
FC(F)(F)COc1ccccc1Cn1cnc(-c2cc(-c3nn[nH]n3)ccn2)c1
C18H14F3N7O
401.352000
AAXGPTXXOLGEDB-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382090; PubChem:CID90407445
Local ready
Direct docking supported