E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L017081
BDB017081
BDBM382091
CC(C)COc1ccccc1Cn1cnc(-c2cc(-c3nn[nH]n3)ccn2)c1
C20H21N7O
375.436000
RRBCZBSZMNUAFC-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382091; PubChem:CID90407203
Local ready
Direct docking supported
E3L017082
BDB017082
BDBM382092
FC(F)(F)c1cccc(Cn2cnc(-c3cc(-c4nn[nH]n4)ccn3)c2)c1Cl
C17H11ClF3N7
405.771000
IWXQPCTUWUKXSM-UHFFFAOYSA-N P29375, Q8NHM5 Lysine-specific demethylase 2B, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM382092; PubChem:CID90407044
Local ready
Direct docking supported
E3L017083
BDB017083
BDBM382093
c1ccc2c(Cn3cnc(-c4cc(-c5nn[nH]n5)ccn4)c3)cccc2c1
C20H15N7
353.389000
RWLJOLCFWMAJGE-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382093; PubChem:CID90407343
Local ready
Direct docking supported
E3L017084
BDB017084
BDBM382094
FC(F)(F)Oc1ccccc1Cn1cnc(-c2cc(-c3nn[nH]n3)ccn2)c1
C17H12F3N7O
387.325000
DSHWUABDXNNPOI-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382094; PubChem:CID90407265
Local ready
Direct docking supported
E3L017085
BDB017085
BDBM382095
CC(c1ccccc1Cl)n1cnc(-c2cc(-c3nn[nH]n3)ccn2)c1
C17H14ClN7
351.801000
VSPJHNXAOMARQG-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382095; PubChem:CID90407836
Local ready
Direct docking supported
E3L017086
BDB017086
BDBM382096
Clc1cccc(Cn2cnc(-c3cc(-c4nn[nH]n4)ccn3)c2)c1Cl
C16H11Cl2N7
372.219000
COHJFYQXZDDDSL-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382096; PubChem:CID90407131
Local ready
Direct docking supported
E3L017087
BDB017087
BDBM382097
Cn1cnc(-c2cc(-c3nn[nH]n3)ccn2)c1-c1ccc(F)c(OCC(F)(F)F)c1
C18H13F4N7O
419.342000
SFGZOXOAJXAEAX-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382097; PubChem:CID90408629
Local ready
Direct docking supported
E3L017088
BDB017088
BDBM382098
Cn1cnc(-c2cc(-c3nn[nH]n3)ccn2)c1-c1ccc(F)c(OCc2ccccc2)c1
C23H18FN7O
427.443000
OFVALDKDZDUPRW-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382098; PubChem:CID90407213
Local ready
Direct docking supported
E3L017089
BDB017089
BDBM382099
Cn1cnc(-c2cc(-c3nn[nH]n3)ccn2)c1-c1ccc(Cl)c(OCc2ccccc2)c1
C23H18ClN7O
443.898000
VPBQOPRBDLTHCU-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382099; PubChem:CID90407250
Local ready
Direct docking supported
E3L017090
BDB017090
BDBM382100
Cn1cnc(-c2cc(-c3nn[nH]n3)ccn2)c1-c1ccc(F)c(O)c1
C16H12FN7O
337.318000
QSQHTZMUYGOEGK-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382100; PubChem:CID90407354
Local ready
Direct docking supported
E3L017091
BDB017091
BDBM382101
Cn1cnc(-c2cc(-c3nn[nH]n3)ccn2)c1-c1ccc(F)c(C(=O)Nc2ccccc2)c1
C23H17FN8O
440.442000
JUOZTTXGXKVWCW-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382101; PubChem:CID90407384
Local ready
Direct docking supported
E3L017092
BDB017092
BDBM382102
Cn1cnc(-c2cc(-c3nn[nH]n3)ccn2)c1-c1ccc(F)c2ccccc12
C20H14FN7
371.379000
QYGSSBGCBQNYDV-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382102; PubChem:CID90407420
Local ready
Direct docking supported
E3L017093
BDB017093
US10273222, Example 165
Cn1nnc(-c2ccnc(-c3cn(Cc4ccccc4Cl)cn3)c2)n1
C17H14ClN7
351.801000
LULNZVARULNQAH-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382103; PubChem:CID90407531
Local ready
Direct docking supported
E3L017094
BDB017094
US10273222, Example 166
CC(C)(C)C(=O)OCn1nnc(-c2ccnc(-c3cn(Cc4ccccc4Cl)cn3)c2)n1
C22H22ClN7O2
451.918000
XEETXODNUHEINK-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382104; PubChem:CID90407154
Local ready
Direct docking supported
E3L017095
BDB017095
US10273222, Example 167
CC(=O)OCn1nnc(-c2ccnc(-c3cn(Cc4ccccc4Cl)cn3)c2)n1
C19H16ClN7O2
409.837000
NPCGMBQJXHGUQX-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382105; PubChem:CID90407321
Local ready
Direct docking supported
E3L017096
BDB017096
BDBM382106
Fc1ccc(-c2c(-c3cc(-c4nn[nH]n4)ccn3)ncn2Cc2cccc(Cl)c2)c(OCC2CC2)c1
C26H21ClFN7O
501.953000
FRGDERRCLFFNOX-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM382106; PubChem:CID90407032
Local ready
Direct docking supported
E3L017097
BDB017097
BDBM383498
COc1ccc2cc(C(=O)C3CCCN(C4CCC4)C3)ccc2c1
C21H25NO2
323.436000
UFYOJSIAULQKBF-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM383498; PubChem:CID45227790
Local ready
Direct docking supported
E3L017098
BDB017098
(3-Chlorophenyl)(1-cyclopentyl-3-piperidinyl)methanone
O=C(c1cccc(Cl)c1)C1CCCN(C2CCCC2)C1
C17H22ClNO
291.822000
RJZUIWNAWGHYLY-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM383499; PubChem:CID45229652
Local ready
Direct docking supported
E3L017099
BDB017099
BDBM383500
COc1ccc(C(=O)C2CCCN(C3CCC3)C2)c(OC)c1
C18H25NO3
303.402000
MKNOOJFMMRTJJM-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM383500; PubChem:CID45214819
Local ready
Direct docking supported
E3L017100
BDB017100
BDBM383501
COc1ccc2cc(C(=O)C3CCCN(C4CCOCC4)C3)ccc2c1
C22H27NO3
353.462000
YGRWESOLGLUGOL-UHFFFAOYSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM383501; PubChem:CID16188363
Local ready
Direct docking supported