E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L017741
BDB017741
US10508086, Example 83
Cc1ncc(Cn2c(=O)n(-c3nnc(C)s3)c3cc(S(=O)(=O)NC4(C)CC4)ccc32)s1
C19H20N6O3S3
476.609000
DEJDCURLUNVOQT-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM421493; PubChem:CID135204808
Local ready
Direct docking supported
E3L017742
BDB017742
US10508086, Example 87
Cc1nnc(-n2c(=O)n(Cc3sc(C)nc3C)c3ccc(S(=O)(=O)NC4(C)CC4)cc32)s1
C20H22N6O3S3
490.636000
HQQQUVLNPWIIFG-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM421497; PubChem:CID121415776
Local ready
Direct docking supported
E3L017743
BDB017743
US10508086, Example 88
Cc1nc(C)c(Cn2c(=O)n(-c3nnc(C(F)F)s3)c3cc(S(=O)(=O)NC4(C)CC4)ccc32)s1
C20H20F2N6O3S3
526.616000
PITVJMBVOOFNIO-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM421498; PubChem:CID121415757
Local ready
Direct docking supported
E3L017744
BDB017744
US10508086, Example 118
Cc1cc(Cc2nc3ccc(S(=O)(=O)NC4(C)CC4)cc3n2-c2nnc(C)s2)on1
C19H20N6O3S2
444.542000
GFQGZSYLYAZPAL-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM421528; PubChem:CID121416040
Local ready
Direct docking supported
E3L017745
BDB017745
US10508086, Example 119
Cc1nnc(-n2cnc3ccc(S(=O)(=O)NC4(C)CC4)cc32)s1
C14H15N5O2S2
349.441000
ALHIKLRFEXYUCD-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM421529; PubChem:CID121415937
Local ready
Direct docking supported
E3L017746
BDB017746
BDBM421539
Cc1nnc(-n2cc(Cc3sc(C)nc3C)c3ccc(S(=O)(=O)NC4(C)CC4)cc32)s1
C21H23N5O2S3
473.649000
JARZVIBTIBGCGT-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM421539; PubChem:CID121415898
Local ready
Direct docking supported
E3L017747
BDB017747
US10508086, Example 145
CC1(NS(=O)(=O)c2ccc3c(C(=O)C4CC4)cn(-c4nnc(C(F)F)s4)c3c2)CC1
C19H18F2N4O3S2
452.508000
MXOUBBVNYDOZQU-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM421555; PubChem:CID121415769
Local ready
Direct docking supported
E3L017748
BDB017748
US10508086, Example 146
Cc1nnc(-n2nc(Cc3ccc(F)cc3)c3ccc(S(=O)(=O)NC4(C)CC4)cc32)s1
C21H20FN5O2S2
457.556000
AYWCLLDSDZLNFI-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM421556; PubChem:CID121415732
Local ready
Direct docking supported
E3L017749
BDB017749
US10508086, Example 174
Cn1c(=O)n(-c2nnc(C(F)F)s2)c2cc(S(=O)(=O)NC3(CF)CC3)c(F)cc21
C15H13F4N5O3S2
451.427000
ITQSVBWAGTUWAZ-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM421584; PubChem:CID121415839
Local ready
Direct docking supported
E3L017750
BDB017750
US10508086, Example 208
CCn1c(=O)n(-c2nnc(C(F)F)s2)c2cc(S(=O)(=O)NC3(CF)CC3)c(F)cc21
C16H15F4N5O3S2
465.454000
HXMYZCNYVJOSTM-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM421618; PubChem:CID121431711
Local ready
Direct docking supported
E3L017751
BDB017751
US10508103, Embodiment 1
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CCC[C@H]1Cc1c(-c2nc3cc(F)ccc3n2C[C@@H]2CCCN2C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)C)[nH]c2cc(F)ccc12)C(C)C
C43H59F2N9O4
804.000000
TUBCAIKBMARNLJ-SUSDRNKHSA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3, Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM422059; PubChem:CID132077976
Local ready
Direct docking supported
E3L017752
BDB017752
US10508103, Embodiment 2
CC[C@H](NC(=O)[C@H](C)NC)C(=O)N1CCC[C@H]1Cc1c(-c2nc3cc(F)ccc3n2C[C@@H]2CCCN2C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)C)[nH]c2cc(F)ccc12
C42H57F2N9O4
789.973000
YPEMVXGCWDOKKD-XPEUDQCASA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM422060; PubChem:CID132078150
Local ready
Direct docking supported
E3L017753
BDB017753
US10508103, Embodiment 13
CC[C@H](NC(=O)[C@H](C)NC)C(=O)N1C[C@@H](F)C[C@H]1Cc1c(-c2nc3cc(F)ccc3n2C[C@@H]2C[C@H](F)CN2C(=O)[C@H](CC)NC(=O)[C@H](C)NC)[nH]c2cc(F)ccc12
C41H53F4N9O4
811.926000
IEFOSQRYEGYBDP-PHPRFWOOSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3
BindingDB, PubChem
BindingDB:BDBM422061; PubChem:CID138622494
Local ready
Direct docking supported
E3L017754
BDB017754
US10508103, Embodiment 14
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](F)C[C@H]1Cc1c(-c2nc3cc(F)ccc3n2C[C@@H]2C[C@H](F)CN2C(=O)[C@@H](NC(=O)[C@H](C)NC)C2CC2)[nH]c2cc(F)ccc12)C1CC1
C43H53F4N9O4
835.948000
SPATUWOZFJOIPR-HCNMAAETSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 2, Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM422062; PubChem:CID132078096
Local ready
Direct docking supported
E3L017755
BDB017755
US10508103, Embodiment 16
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](F)C[C@H]1Cc1c(-c2nc3cc(F)ccc3n2C[C@@H]2C[C@H](F)CN2C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)C)[nH]c2cc(F)ccc12)C(C)C
C43H57F4N9O4
839.980000
PRAFSZQGAUOXSP-RJJGOXBRSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 2, Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM422063; PubChem:CID138622493
Local ready
Direct docking supported
E3L017756
BDB017756
US10508103, Embodiment 17
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](F)C[C@H]1Cc1c(-c2nc3cc(F)ccc3n2C[C@@H]2C[C@H](F)CN2C(=O)[C@@H](NC(=O)[C@H](C)NC)C2CCC2)[nH]c2cc(F)ccc12)C1CCC1
C45H57F4N9O4
864.002000
YYWGIHSWOOYYDJ-PUCTWYFLSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM422064; PubChem:CID132078059
Local ready
Direct docking supported
E3L017757
BDB017757
US10508103, Embodiment 18
CC[C@H](NC(=O)[C@H](C)NC)C(=O)N1C[C@@H](F)C[C@H]1Cc1c(-c2nc3cc(F)ccc3n2C[C@@H]2C[C@H](F)CN2C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)C)[nH]c2cc(F)ccc12
C42H55F4N9O4
825.953000
GLPCWPIGKOMRHM-GFRDOYFHSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM422065; PubChem:CID132077957
Local ready
Direct docking supported
E3L017758
BDB017758
US10508103, Embodiment 19
CC[C@H](NC(=O)[C@H](C)NC)C(=O)N1C[C@@H](F)C[C@H]1Cc1c(-c2nc3cc(F)ccc3n2C[C@@H]2C[C@H](F)CN2C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)[nH]c2cc(F)ccc12
C43H57F4N9O4
839.980000
ZGACJJOPYSCTSN-AQICJMBNSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM422066; PubChem:CID138622401
Local ready
Direct docking supported
E3L017759
BDB017759
US10508103, Embodiment 20
CC[C@H](NC(=O)[C@H](C)NC)C(=O)N1C[C@@H](F)C[C@H]1Cc1c(-c2nc3cc(F)ccc3n2C[C@@H]2C[C@H](F)CN2C(=O)[C@@H](NC(=O)[C@H](C)NC)C2CCCCC2)[nH]c2cc(F)ccc12
C45H59F4N9O4
866.018000
APTRBTUTSFUIJT-IAECAYPDSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM422067; PubChem:CID132078015
Local ready
Direct docking supported
E3L017760
BDB017760
US10508103, Embodiment 21
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](F)C[C@H]1Cc1c(-c2nc3cc(F)ccc3n2C[C@@H]2C[C@H](F)CN2C(=O)[C@@H](NC(=O)[C@H](C)NC)C2CC2)[nH]c2cc(F)ccc12)C(C)C
C43H55F4N9O4
837.964000
PFMHFJAZXBATKV-LGXHBFLKSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3
BindingDB, PubChem
BindingDB:BDBM422068; PubChem:CID132078014
Local ready
Direct docking supported