E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L017801
BDB017801
US10500194, Example 31
C=CC(=O)NC[C@H](Cc1ccncc1)NC(=O)[C@H](Cc1nc2ccc(C(C)C)cc2s1)NC(=O)CC
C27H33N5O3S
507.660000
ODRWXYDMPKWNME-UNMCSNQZSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM423142; PubChem:CID135350672
Local ready
Direct docking supported
E3L017802
BDB017802
US10500194, Example 32
C=CC(=O)NC[C@H](Cc1cccnc1)NC(=O)[C@H](Cc1nc2ccc(C(C)C)cc2s1)NC(=O)CC
C27H33N5O3S
507.660000
VQVKFNRMKVTGKI-UNMCSNQZSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM423143; PubChem:CID135350744
Local ready
Direct docking supported
E3L017803
BDB017803
US10500194, Example 33
C=CS(=O)(=O)NC[C@H](Cc1cccnc1)NC(=O)[C@H](Cc1nc2ccc(C(C)C)cc2s1)NC(=O)CC
C26H33N5O4S2
543.715000
BOXSSOOHIQHVDU-UNMCSNQZSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM423144; PubChem:CID135350778
Local ready
Direct docking supported
E3L017804
BDB017804
US10500194, Example 34
C=C(CN1CCOCC1)C(=O)NC[C@H](Cc1cccnc1)NC(=O)[C@H](Cc1nc2ccc(C(C)C)cc2s1)NC(=O)CC
C32H42N6O4S
606.793000
CMNMXZQKSPSOGQ-BDYUSTAISA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM423145; PubChem:CID135350660
Local ready
Direct docking supported
E3L017805
BDB017805
US10500194, Example 35
C=C(CN1CCOCC1)C(=O)NC[C@H](Cc1ccccc1)NC(=O)[C@H](Cc1cn2cc(Cl)ccc2n1)NC(=O)CC
C30H37ClN6O4
581.117000
KFDPEYNJZFAXAS-AHWVRZQESA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM423146; PubChem:CID135350724
Local ready
Direct docking supported
E3L017806
BDB017806
US10500194, Example 36
C=C(CN1CCOCC1)C(=O)NC[C@H](Cc1ccc(F)cc1)NC(=O)[C@H](Cc1nc2ccc(C(C)C)cc2s1)NC(=O)CC
C33H42FN5O4S
623.795000
VQMUKMSIHVQNMD-XCZPVHLTSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM423147; PubChem:CID135350684
Local ready
Direct docking supported
E3L017807
BDB017807
US10500194, Example 37
C=CC(=O)NC[C@@H](NC(=O)[C@H](Cc1nc2ccc(C(C)C)cc2s1)NC(=O)CC)C1CCCCC1
C27H38N4O3S
498.693000
PQQJLERXFDDBSW-FCHUYYIVSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM423148; PubChem:CID135350736
Local ready
Direct docking supported
E3L017808
BDB017808
US10500194, Example 38
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNC(=O)CCl)C1CCCCC1
C26H37ClN4O3S
521.127000
CICCUAIEXPEGRH-LEWJYISDSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM423149; PubChem:CID135350733
Local ready
Direct docking supported
E3L017809
BDB017809
BDBM423150
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNC(=O)/C=C/CN1CCOCC1)C1CCCCC1
C32H47N5O4S
597.826000
UJFGLWDCOSKDAK-LXTBRXRSSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM423150; PubChem:CID135350803
Local ready
Direct docking supported
E3L017810
BDB017810
US10501466, Example B1
COc1cccc(C(=O)N(CC2CC2)C2CCc3ccc(-c4cn5c(n4)CCC5)cc32)c1
C27H29N3O2
427.548000
CPIAIQHDZOTIHD-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM423366; PubChem:CID138470383
Local ready
Direct docking supported
E3L017811
BDB017811
US10501466, Example B2
Cc1ccc(C(=O)NC2CCc3ccc(-c4cn5c(n4)CCC5)cc32)cc1C(F)(F)F
C24H22F3N3O
425.454000
VCRJNMVHRSWNIS-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM423367; PubChem:CID138470406
Local ready
Direct docking supported
E3L017812
BDB017812
US10501466, Example B3
COc1cc(C(=O)NC2CCc3ccc(-c4cn5c(n4)CCC5)cc32)ccc1C
C24H25N3O2
387.483000
PHINNLAJTUGZSZ-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM423368; PubChem:CID138470393
Local ready
Direct docking supported
E3L017813
BDB017813
US10501466, Example B4
CCOc1cccc(C(=O)NC2CCc3ccc(-c4cn5c(n4)CCC5)cc32)c1
C24H25N3O2
387.483000
UFFWQQMDJDHECY-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM423369; PubChem:CID138470445
Local ready
Direct docking supported
E3L017814
BDB017814
US10501466, Example B5
COc1cc(C)cc(C(=O)NC2CCc3ccc(-c4cn5c(n4)CCC5)cc32)c1
C24H25N3O2
387.483000
JGLPLQYDHABILB-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM423370; PubChem:CID138470382
Local ready
Direct docking supported
E3L017815
BDB017815
US10501466, Example B6
O=C(Cc1ccc(Cl)c(Cl)c1)NC1CCc2ccc(-c3cn4c(n3)CCC4)cc21
C23H21Cl2N3O
426.347000
HLGZWOPKLXYBFI-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM423371; PubChem:CID138470407
Local ready
Direct docking supported
E3L017816
BDB017816
US10501466, Example B7
CC(=O)N1CCCC(C(=O)NC2CCc3ccc(-c4cn5c(n4)CCC5)cc32)C1
C23H28N4O2
392.503000
BKBBJFFASFNPGD-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM423372; PubChem:CID138470440
Local ready
Direct docking supported
E3L017817
BDB017817
US10501466, Example B8
CCC(=O)N1CCCC(C(=O)NC2CCc3ccc(-c4cn5c(n4)CCC5)cc32)C1
C24H30N4O2
406.530000
NLYDZVTWTSGDDI-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM423373; PubChem:CID138470417
Local ready
Direct docking supported
E3L017818
BDB017818
US10501466, Example B9
O=C(NC1CCc2ccc(-c3cn4c(n3)CCC4)cc21)C1CCCN(C(=O)CC(F)(F)F)C1
C24H27F3N4O2
460.500000
ZBFBWTCDWNQFHE-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM423374; PubChem:CID138470434
Local ready
Direct docking supported
E3L017819
BDB017819
US10501466, Example B10
CC(C)C(=O)N1CCCC(C(=O)NC2CCc3ccc(-c4cn5c(n4)CCC5)cc32)C1
C25H32N4O2
420.557000
BSXACVXBICDKEQ-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM423375; PubChem:CID138470447
Local ready
Direct docking supported
E3L017820
BDB017820
US10501466, Example B12
COc1cc(C(=O)N[C@@H]2CCc3ccc(-c4cn5c(n4)CCC5)cc32)ccc1C
C24H25N3O2
387.483000
PHINNLAJTUGZSZ-HXUWFJFHSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM423377; PubChem:CID137349382
Local ready
Direct docking supported