E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L018801
BDB018801
US10669234, Example 11
COc1ccccc1-c1cccc2c1CCN2C(=O)[C@@H]1CCCN1C#N
C21H21N3O2
347.418000
LMVCADKTOPZYBN-IBGZPJMESA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445072; PubChem:CID140885151
Local ready
Direct docking supported
E3L018802
BDB018802
3-(1-(cyano-L-prolyl)indolin-4-yl)-N-methylbenzamide
CNC(=O)c1cccc(-c2cccc3c2CCN3C(=O)[C@@H]2CCCN2C#N)c1
C22H22N4O2
374.444000
CRDCHCGQXWFHMG-FQEVSTJZSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445073; PubChem:CID140885159
Local ready
Direct docking supported
E3L018803
BDB018803
BDBM445074
N#CN1CCC[C@H]1C(=O)N1CCc2c(C3CC3)cccc21
C17H19N3O
281.359000
AHXHFWKYIYXQMV-INIZCTEOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445074; PubChem:CID140885139
Local ready
Direct docking supported
E3L018804
BDB018804
US10669234, Example 14
CO[C@H]1C[C@@H](C(=O)N2CCc3c(-c4ccccc4)cccc32)N(C#N)C1
C21H21N3O2
347.418000
DJQHWGVEXLMBAZ-JXFKEZNVSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445075; PubChem:CID124197518
Local ready
Direct docking supported
E3L018805
BDB018805
US10669234, Example 15
CO[C@@H]1C[C@@H](C(=O)N2CCc3c(-c4ccccc4)cccc32)N(C#N)C1
C21H21N3O2
347.418000
DJQHWGVEXLMBAZ-UZLBHIALSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445076; PubChem:CID140318280
Local ready
Direct docking supported
E3L018806
BDB018806
US10669234, Example 16
Cc1oncc1-c1ccc2c(c1)CCN2C(=O)[C@@H]1CCCN1C#N
C18H18N4O2
322.368000
VQXZQBLOCQIOOC-KRWDZBQOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445077; PubChem:CID140885166
Local ready
Direct docking supported
E3L018807
BDB018807
BDBM445078
N#CN1CCC[C@H]1C(=O)N1CCc2cc(-c3ccccc3)ccc21
C20H19N3O
317.392000
PTEPIQYGZOAPCJ-IBGZPJMESA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445078; PubChem:CID140885165
Local ready
Direct docking supported
E3L018808
BDB018808
BDBM445079
N#CN1CCC[C@H]1C(=O)N1CCc2cc(-c3cn[nH]c3C(F)(F)F)ccc21
C18H16F3N5O
375.354000
FYIRZBLRACCKNX-HNNXBMFYSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445079; PubChem:CID135205527
Local ready
Direct docking supported
E3L018809
BDB018809
US10669234, Example 19
N#CN1CCC[C@H]1C(=O)N1CCc2c(-c3cn[nH]c3C(F)(F)F)cccc21
C18H16F3N5O
375.354000
AIDJSSPSMPDBMV-HNNXBMFYSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445080; PubChem:CID124197627
Local ready
Direct docking supported
E3L018810
BDB018810
US10669234, Example 20
N#CN1CCC[C@H]1C(=O)N1CCc2c(-c3cn[nH]c3)cccc21
C17H17N5O
307.357000
AZVYCCRALWFRRD-INIZCTEOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445081; PubChem:CID124197479
Local ready
Direct docking supported
E3L018811
BDB018811
US10669234, Example 21
Cc1[nH]ncc1-c1cccc2c1CCN2C(=O)[C@@H]1CCCN1C#N
C18H19N5O
321.384000
FVZXOSYEKUHRSU-KRWDZBQOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445082; PubChem:CID124197482
Local ready
Direct docking supported
E3L018812
BDB018812
US10669234, Example 22
N#Cc1ccc(-c2cccc3c2CCN3C(=O)[C@@H]2CCCN2C#N)cc1
C21H18N4O
342.402000
LURHVDXFRRUNIS-FQEVSTJZSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445083; PubChem:CID140885137
Local ready
Direct docking supported
E3L018813
BDB018813
US10669234, Example 23
N#Cc1cccc(-c2cccc3c2CCN3C(=O)[C@@H]2CCCN2C#N)c1
C21H18N4O
342.402000
WNYLPSCEQVXVEU-FQEVSTJZSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445084; PubChem:CID140885174
Local ready
Direct docking supported
E3L018814
BDB018814
US10669234, Example 24
N#Cc1ccccc1-c1cccc2c1CCN2C(=O)[C@@H]1CCCN1C#N
C21H18N4O
342.402000
WLUCIYYGHLKLSV-FQEVSTJZSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445085; PubChem:CID140885148
Local ready
Direct docking supported
E3L018815
BDB018815
BDBM445086
Cc1n[nH]c(C)c1-c1cccc2c1CCN2C(=O)[C@@H]1CCCN1C#N
C19H21N5O
335.411000
SAJCGIOIIFCNBN-KRWDZBQOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445086; PubChem:CID135204464
Local ready
Direct docking supported
E3L018816
BDB018816
BDBM445087
N#CN1CCC[C@H]1C(=O)N1CCc2c(-c3cc[nH]n3)cccc21
C17H17N5O
307.357000
IBZCVKYHIYJHBO-INIZCTEOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445087; PubChem:CID135205530
Local ready
Direct docking supported
E3L018817
BDB018817
US10669234, Example 27
N#CN1CCC[C@H]1C(=O)N1CCc2c(-c3c[nH]c4ncccc34)cccc21
C21H19N5O
357.417000
PJYJFXAKGZEDNG-IBGZPJMESA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445088; PubChem:CID135205943
Local ready
Direct docking supported
E3L018818
BDB018818
US10669234, Example 28
N#CN1CC(F)(F)C[C@H]1C(=O)N1CCc2c(-c3cn[nH]c3C(F)(F)F)cccc21
C18H14F5N5O
411.334000
BHILSXATFZMXGG-AWEZNQCLSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445089; PubChem:CID135205478
Local ready
Direct docking supported
E3L018819
BDB018819
US10669234, Example 29
N#CN1C[C@@H](F)C[C@H]1C(=O)N1CCc2c(-c3cn[nH]c3C(F)(F)F)cccc21
C18H15F4N5O
393.344000
AHCBJXSHVXHGHF-BONVTDFDSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445090; PubChem:CID135204674
Local ready
Direct docking supported
E3L018820
BDB018820
US10669234, Example 30
Cc1[nH]ncc1-c1cccc2c1CCN2C(=O)[C@@H]1CC(F)(F)CN1C#N
C18H17F2N5O
357.364000
XOANBZMRYZSVBZ-INIZCTEOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445091; PubChem:CID135205376
Local ready
Direct docking supported