E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L018821
BDB018821
BDBM445092
N#CN1CCC[C@H]1C(=O)N1CCc2cc(-c3ccn[nH]3)ccc21
C17H17N5O
307.357000
GVORCYITLGCSND-INIZCTEOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445092; PubChem:CID135204357
Local ready
Direct docking supported
E3L018822
BDB018822
BDBM445093
N#CN1CCC[C@H]1C(=O)N1Cc2cccc(-c3ccccc3)c2C1
C20H19N3O
317.392000
GHESLAQUATUPKG-IBGZPJMESA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445093; PubChem:CID135205049
Local ready
Direct docking supported
E3L018823
BDB018823
BDBM445094
N#CN1CCC[C@H]1C(=O)N1Cc2ccc(-c3ccccc3)cc2C1
C20H19N3O
317.392000
AEWPXKRBWMHBRQ-IBGZPJMESA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445094; PubChem:CID140885177
Local ready
Direct docking supported
E3L018824
BDB018824
US10669234, Example 34
N#CN1CCC[C@H]1C(=O)N1CCc2c(-c3ccccn3)cccc21
C19H18N4O
318.380000
HIUWPHSAUQMWQZ-SFHVURJKSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445095; PubChem:CID124197488
Local ready
Direct docking supported
E3L018825
BDB018825
US10669234, Example 35
N#CN1CCC[C@H]1C(=O)N1CCc2c(-c3ccnnc3)cccc21
C18H17N5O
319.368000
FJHVMDWNTLUVSA-KRWDZBQOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445096; PubChem:CID140885171
Local ready
Direct docking supported
E3L018826
BDB018826
US10669234, Example 36
N#CN1CCC[C@H]1C(=O)N1CCc2c(-c3ccncn3)cccc21
C18H17N5O
319.368000
SOGGLSWYHHABAC-KRWDZBQOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445097; PubChem:CID140885153
Local ready
Direct docking supported
E3L018827
BDB018827
BDBM445098
N#CN1CCC[C@H]1C(=O)N1CCc2c(-c3c[nH]nc3C3CC3)cccc21
C20H21N5O
347.422000
MSGKAAMUHQRYPB-SFHVURJKSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445098; PubChem:CID135204986
Local ready
Direct docking supported
E3L018828
BDB018828
US10669234, Example 38
N#CN1CCC[C@H]1C(=O)N1CCc2c(-c3ccnc(N)n3)cccc21
C18H18N6O
334.383000
JLUATDZRMHBKNN-INIZCTEOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445099; PubChem:CID140885161
Local ready
Direct docking supported
E3L018829
BDB018829
US10669234, Example 39
N#CN1CCC[C@H]1C(=O)N1CCc2c(-c3ccncc3)cccc21
C19H18N4O
318.380000
WGHVSQRRRUPDBP-SFHVURJKSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445100; PubChem:CID124197492
Local ready
Direct docking supported
E3L018830
BDB018830
US10669234, Example 40
Cc1oncc1-c1cccc2c1CCN2C(=O)[C@@H]1CCCN1C#N
C18H18N4O2
322.368000
DTPPEGSKBHKTOF-KRWDZBQOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445101; PubChem:CID140885164
Local ready
Direct docking supported
E3L018831
BDB018831
US11319287, Example 7
Cc1noc(C)c1-c1cccc2c1CCN2C(=O)[C@@H]1CCCN1C#N
C19H20N4O2
336.395000
MRVYZKBROYHVDF-KRWDZBQOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445102; PubChem:CID135205707
Local ready
Direct docking supported
E3L018832
BDB018832
US10669234, Example 42
N#CN1CCC[C@H]1C(=O)N1CCc2c(-c3cccnc3)cccc21
C19H18N4O
318.380000
KHDWCTFCLZXTEQ-SFHVURJKSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445103; PubChem:CID140885132
Local ready
Direct docking supported
E3L018833
BDB018833
BDBM445104
N#CN1CCC[C@H]1C(=O)N1CCc2ccc(-c3ccccc3)cc21
C20H19N3O
317.392000
BNKOCYHYDZKWKP-SFHVURJKSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445104; PubChem:CID124197494
Local ready
Direct docking supported
E3L018834
BDB018834
US10669234, Example 44
N#CN1CCC[C@H]1C(=O)N1CCOc2c(-c3ccccc3)cccc21
C20H19N3O2
333.391000
XOZAOVYOVHMOBC-SFHVURJKSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445105; PubChem:CID135205265
Local ready
Direct docking supported
E3L018835
BDB018835
US10669234, Example 45
N#CN1CCC[C@H]1C(=O)N1CCCc2c(-c3ccccc3)cccc21
C21H21N3O
331.419000
HBUQOCHFSXXTAY-FQEVSTJZSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445106; PubChem:CID135205343
Local ready
Direct docking supported
E3L018836
BDB018836
US10669234, Example 46
COc1ccccc1-c1csc(N(C)C(=O)[C@@H]2CCCN2C#N)n1
C17H18N4O2S
342.424000
IJXKVEAWLXTUTE-AWEZNQCLSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445107; PubChem:CID124197434
Local ready
Direct docking supported
E3L018837
BDB018837
US10669234, Example 47
COc1cccc(-c2csc(N(C)C(=O)[C@@H]3CCCN3C#N)n2)c1
C17H18N4O2S
342.424000
HAGHQCDRXRUHJX-HNNXBMFYSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445108; PubChem:CID135205926
Local ready
Direct docking supported
E3L018838
BDB018838
US10669234, Example 48
CN(C(=O)[C@@H]1CCCN1C#N)c1nc(-c2ccccn2)cs1
C15H15N5OS
313.386000
FAJFRTTWIMGORN-ZDUSSCGKSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445109; PubChem:CID135204316
Local ready
Direct docking supported
E3L018839
BDB018839
US10669234, Example 49
CN(C(=O)[C@@H]1CCCN1C#N)c1nc(-c2cccnc2)cs1
C15H15N5OS
313.386000
UVROMVXOLVZJBN-ZDUSSCGKSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445110; PubChem:CID135205035
Local ready
Direct docking supported
E3L018840
BDB018840
US10669234, Example 50
CN(C(=O)[C@@H]1CCCN1C#N)c1nc(-c2ccncc2)cs1
C15H15N5OS
313.386000
NJZNESGNKPSFFK-ZDUSSCGKSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445111; PubChem:CID135204623
Local ready
Direct docking supported