E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L018881
BDB018881
US10669234, Example 103
CNC(=O)c1cc(-c2ccccc2Cl)c2c(c1)N(C(=O)[C@@H]1CCCN1C#N)CC2
C22H21ClN4O2
408.889000
WHFKIEYBBULDCZ-IBGZPJMESA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445152; PubChem:CID135205222
Local ready
Direct docking supported
E3L018882
BDB018882
US10669234, Example 104
CNC(=O)c1cc(-c2ccc(Cl)c(Cl)c2)c2c(c1)N(C(=O)[C@@H]1CCCN1C#N)CC2
C22H20Cl2N4O2
443.334000
HMDPLQQUMZHZRG-IBGZPJMESA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445153; PubChem:CID135205151
Local ready
Direct docking supported
E3L018883
BDB018883
US10669234, Example 105
CNC(=O)c1cc(-c2ccc3c(c2)OCO3)c2c(c1)N(C(=O)[C@@H]1CCCN1C#N)CC2
C23H22N4O4
418.453000
FTDLODJAIMNALU-SFHVURJKSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445154; PubChem:CID135205264
Local ready
Direct docking supported
E3L018884
BDB018884
US10669234, Example 109
CCN(C(=O)[C@@H]1CCCN1C(=O)OC(C)(C)C)c1nc(-c2cccc(Cl)c2)cs1
C21H26ClN3O3S
435.977000
IDGCQIKYYGMWLZ-KRWDZBQOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445155; PubChem:CID124197549
Local ready
Direct docking supported
E3L018885
BDB018885
US10669234, Example 110
CN(C(=O)[C@@H]1CCCN1C(=O)OC(C)(C)C)c1nc(-c2cncc(Br)c2)cs1
C19H23BrN4O3S
467.389000
MNTABRMUKGDYMT-HNNXBMFYSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445156; PubChem:CID124197544
Local ready
Direct docking supported
E3L018886
BDB018886
US10669234, Example 112
N#CN1CCC[C@H]1C(=O)N1CCc2c(-c3cccc(Cl)c3)cccc21
C20H18ClN3O
351.837000
VMYMUPNFTDKDMR-IBGZPJMESA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445157; PubChem:CID140885134
Local ready
Direct docking supported
E3L018887
BDB018887
BDBM445158
N#CN1CCC[C@H]1C(=O)N1Cc2ccc(-c3c[nH]nc3C(F)(F)F)cc2C1
C18H16F3N5O
375.354000
UJEGNFZIQZQITK-HNNXBMFYSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445158; PubChem:CID135205260
Local ready
Direct docking supported
E3L018888
BDB018888
4-(1-(cyano-L-prolyl)indolin-4-yl)nicotinonitrile
N#Cc1cnccc1-c1cccc2c1CCN2C(=O)[C@@H]1CCCN1C#N
C20H17N5O
343.390000
YXXMBPGLQFRQLH-IBGZPJMESA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445159; PubChem:CID140885157
Local ready
Direct docking supported
E3L018889
BDB018889
US10669234, Example 117
N#CN1CCC[C@H]1C(=O)N1CCc2c(-c3ccnc4[nH]ccc34)cccc21
C21H19N5O
357.417000
CRINRUDDKSBHIM-IBGZPJMESA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445160; PubChem:CID135205131
Local ready
Direct docking supported
E3L018890
BDB018890
US10669234, Example 118
N#CN1CCC[C@H]1C(=O)N1CCc2c(-c3cccc(N)n3)cccc21
C19H19N5O
333.395000
QWXLOTOMNSXTBW-KRWDZBQOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445161; PubChem:CID140885147
Local ready
Direct docking supported
E3L018891
BDB018891
US10669234, Example 119
N#CN1CCC[C@H]1C(=O)N1CCc2c(-c3cncc(N)n3)cccc21
C18H18N6O
334.383000
YOGAXMPPMMXAEY-INIZCTEOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445162; PubChem:CID140885146
Local ready
Direct docking supported
E3L018892
BDB018892
US10669234, Example 120
CNc1nccc(-c2cccc3c2CCN3C(=O)[C@@H]2CCCN2C#N)n1
C19H20N6O
348.410000
QXXVNRVLJDODMU-KRWDZBQOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445163; PubChem:CID140885138
Local ready
Direct docking supported
E3L018893
BDB018893
US10669234, Example 121
N#CN1CCC[C@H]1C(=O)N1CCc2c(-c3cnc(N)nc3)cccc21
C18H18N6O
334.383000
PGWVBDMLLJFVDO-INIZCTEOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445164; PubChem:CID140885173
Local ready
Direct docking supported
E3L018894
BDB018894
US10669234, Example 122
N#CN1CCC[C@H]1C(=O)N1CCc2c(-c3n[nH]c4ncccc34)cccc21
C20H18N6O
358.405000
ITVHSCOFHWBGHL-KRWDZBQOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445165; PubChem:CID135205141
Local ready
Direct docking supported
E3L018895
BDB018895
US10669234, Example 123
N#CN1CCC[C@H]1C(=O)N1CCc2c(-c3c[nH]c4nccnc34)cccc21
C20H18N6O
358.405000
HFYHHCUUAZHVOR-KRWDZBQOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445166; PubChem:CID140885162
Local ready
Direct docking supported
E3L018896
BDB018896
US10669234, Example 124
CN(C(=O)[C@@H]1CCCN1C#N)c1nc(-c2ccc(F)c(Cl)c2)cs1
C16H14ClFN4OS
364.833000
HLYWOXLKZGUNLZ-AWEZNQCLSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445167; PubChem:CID135205657
Local ready
Direct docking supported
E3L018897
BDB018897
US10669234, Example 125
CN(C(=O)[C@@H]1CCCN1C#N)c1nc(-c2cccc(C(F)(F)F)c2)cs1
C17H15F3N4OS
380.395000
JQYNODAUGQIMPL-AWEZNQCLSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445168; PubChem:CID135204760
Local ready
Direct docking supported
E3L018898
BDB018898
US10669234, Example 126
CN(C(=O)[C@@H]1CCCN1C#N)c1nc(-c2cccc(C#N)c2)cs1
C17H15N5OS
337.408000
LJALYPZMAKFPSM-HNNXBMFYSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM445169; PubChem:CID135204796
Local ready
Direct docking supported
E3L018899
BDB018899
US10696655, Example 1
CNC(=O)N1CCOc2ccc(-c3nccc4ccccc34)cc2C1
C20H19N3O2
333.391000
DTVDVNBQAJTARO-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM448528; PubChem:CID132169488
Local ready
Direct docking supported
E3L018900
BDB018900
US10696655, Example 2
CNC(=O)N1CCOc2ccc(-c3nc(N)cc4cnccc34)cc2C1
C19H19N5O2
349.394000
CTSRZBZJYQPTNA-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM448529; PubChem:CID132181510
Local ready
Direct docking supported