E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L019141
BDB019141
1-(2,6-Dimethylpyridin-3-yl)-8-(2,4-
Cc1ccc(-c2ncn3c(NCc4c(F)ccc5c4CCO5)ncc(-c4cnc(C)nc4C)c23)c(C)n1
C28H26FN7O
495.562000
DCRVHULDTVKEEV-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM451083; PubChem:CID139346165
Local ready
Direct docking supported
E3L019142
BDB019142
US10676479, Example 114
Cc1ccc(-c2ncn3c(NCc4c(F)ccc5c4CCO5)ncc(-c4cnc(C)nc4C)c23)cn1
C27H24FN7O
481.535000
UATGKUUUDPUKBJ-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM451084; PubChem:CID139346264
Local ready
Direct docking supported
E3L019143
BDB019143
US10676479, Example 115
Cc1ccc(-c2ncn3c(NCc4c(F)ccc5c4CCO5)ncc(-c4cccnc4C)c23)cn1
C27H23FN6O
466.520000
AZVTZJGVTDJFBH-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM451085; PubChem:CID139346317
Local ready
Direct docking supported
E3L019144
BDB019144
US10676479, Example 116
Cc1ncccc1-c1cnc(NCc2c(F)ccc3c2CCO3)n2cnc(C#C[Si](C)(C)C)c12
C26H26FN5OSi
471.612000
GCXUTKWSOMTREF-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM451086; PubChem:CID141756778
Local ready
Direct docking supported
E3L019145
BDB019145
US10676479, Example 117
CC(C)Oc1ccc(-c2ncn3c(NCc4c(F)ccc5c4CCO5)ncc(-c4ccc(S(C)(=O)=O)cc4)c23)cc1
C31H29FN4O4S
572.662000
KHTAHNLUZHBHAE-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM451087; PubChem:CID139346022
Local ready
Direct docking supported
E3L019146
BDB019146
US10676479, Example 118
CS(=O)(=O)c1ccc(-c2cnc(NCc3c(F)ccc4c3CCO4)n3cnc(-c4ncco4)c23)cc1
C25H20FN5O4S
505.531000
HCKCPOSCZKRALI-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM451088; PubChem:CID139346185
Local ready
Direct docking supported
E3L019147
BDB019147
US10676479, Example 119
N#Cc1ncn2c(NCc3c(F)ccc4c3CCO4)ncc(-n3ccnc3)c12
C19H14FN7O
375.367000
PZVFFWBZIIXNKR-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM451089; PubChem:CID139346227
Local ready
Direct docking supported
E3L019148
BDB019148
(5-(((5-Fluoro-2,3-dihydrobenzofuran-4-
Cc1ncccc1-c1cnc(NCc2c(F)ccc3c2CCO3)n2cnc(CO)c12
C22H20FN5O2
405.433000
KNONDVBPBAVBKN-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM451090; PubChem:CID139346327
Local ready
Direct docking supported
E3L019149
BDB019149
US10711007, Example 1A
Nc1ncnc2c1ccn2[C@@H]1O[C@H]([C@@H]2OCc3cc(Cl)ccc32)[C@@H](O)[C@H]1O
C18H17ClN4O4
388.811000
BQXHUBIROWQFCN-CIBFVHANSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM452962; PubChem:CID139488414
Local ready
Direct docking supported
E3L019150
BDB019150
US10711007, Example 2A
Nc1ncnc2c1ccn2[C@@H]1C[C@H]([C@H]2OCc3cc(Cl)ccc32)[C@@H](O)[C@H]1O
C19H19ClN4O3
386.839000
SSNBXGFUCGOVPH-BIVLZKPYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM452992; PubChem:CID139488577
Local ready
Direct docking supported
E3L019151
BDB019151
US10711007, Example 3A
Nc1ncnc2c1ccn2[C@@H]1C[C@H]([C@@H]2OC(=O)c3cc(Cl)ccc32)[C@@H](O)[C@H]1O
C19H17ClN4O4
400.822000
AYZHNCVUEKECDO-CQJMVSDSSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM452993; PubChem:CID139488568
Local ready
Direct docking supported
E3L019152
BDB019152
US10711007, Example 3B
Nc1ncnc2c1ccn2[C@@H]1C[C@H]([C@H]2OC(=O)c3cc(Cl)ccc32)[C@@H](O)[C@H]1O
C19H17ClN4O4
400.822000
AYZHNCVUEKECDO-OTJKEOIZSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM452994; PubChem:CID139488403
Local ready
Direct docking supported
E3L019153
BDB019153
US10711007, Example 2B
Nc1ncnc2c1ccn2[C@@H]1C[C@H]([C@@H]2OCc3cc(Cl)ccc32)[C@@H](O)[C@H]1O
C19H19ClN4O3
386.839000
SSNBXGFUCGOVPH-JZAWBGDQSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM452996; PubChem:CID139488471
Local ready
Direct docking supported
E3L019154
BDB019154
US10711007, Example 4
Nc1ncnc2c1ccn2[C@@H]1O[C@H]([C@@H]2OCc3cc(F)c(F)cc32)[C@@H](O)[C@H]1O
C18H16F2N4O4
390.346000
HKXVKNIGULOIGM-CIBFVHANSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM452997; PubChem:CID139488399
Local ready
Direct docking supported
E3L019155
BDB019155
Prmt5-IN-13
Nc1ncnc2c1ccn2[C@@H]1O[C@H]([C@@H]2OCc3ccc(Cl)cc32)[C@@H](O)[C@H]1O
C18H17ClN4O4
388.811000
BKXOWBKZDGTLFX-CIBFVHANSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM452998; PubChem:CID139488356
Local ready
Direct docking supported
E3L019156
BDB019156
US10711007, Example 15
Cc1ncnc2c1ccn2[C@@H]1O[C@H]([C@@H]2OCc3ccc(Cl)cc32)[C@@H](O)[C@H]1O
C19H18ClN3O4
387.823000
XLDLIFBOVZRYMG-WAXPSYRMSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM452999; PubChem:CID139488438
Local ready
Direct docking supported
E3L019157
BDB019157
US10711007, Example 22
Cc1ncnc2c1ccn2[C@@H]1O[C@H]([C@@H]2OCCc3cc(Cl)ccc32)[C@@H](O)[C@H]1O
C20H20ClN3O4
401.850000
MLESHNTYCKAIOZ-ILRSOXBSSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM453000; PubChem:CID139488372
Local ready
Direct docking supported
E3L019158
BDB019158
US10711007, Example 42
COC1Cc2cc(Cl)ccc2[C@H]([C@H]2O[C@@H](n3ccc4c(N)ncnc43)[C@H](O)[C@@H]2O)O1
C20H21ClN4O5
432.864000
LZOCADXQVPMWPC-CHGXTBDYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM453001; PubChem:CID139488551
Local ready
Direct docking supported
E3L019159
BDB019159
US10711007, Example 43
Nc1ncnc2c1ccn2[C@@H]1O[C@H]([C@@H]2OC(O)Cc3cc(Cl)ccc32)[C@@H](O)[C@H]1O
C19H19ClN4O5
418.837000
HQPIJWPBMNFLDK-KUUSOUCTSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM453002; PubChem:CID139488262
Local ready
Direct docking supported
E3L019160
BDB019160
US10711007, Example 44
COC1Cc2cc(Cl)ccc2[C@H]([C@H]2O[C@@H](n3ccc4c(C)ncnc43)[C@H](O)[C@@H]2O)O1
C21H22ClN3O5
431.876000
JJOGURNSAMIAPO-SJPCJUEYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM453003; PubChem:CID139488488
Local ready
Direct docking supported