E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L023021
BDB023021
US11207325, Example 170
Cn1cc(-c2cnc(NCc3c(F)ccc4c3CCO4)n3cnnc23)c(C(F)(F)F)n1
C19H15F4N7O
433.369000
XAFJTQTWRKCBFK-UHFFFAOYSA-N O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM531247; PubChem:CID121432982
Local ready
Direct docking supported
E3L023022
BDB023022
US11207325, Example 204
Cc1nc(NCc2c(F)ccc3c2CCO3)n2cnnc2c1-c1ccc[n+]([O-])c1C
C21H19FN6O2
406.421000
UPEGVYPQHFPRNW-UHFFFAOYSA-N O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM531281; PubChem:CID163200919
Local ready
Direct docking supported
E3L023023
BDB023023
US11208416, Example 17
CSC[C@H]1OC(n2ccc3c(N)ncnc32)[C@H](O)[C@]1(C)O
C13H18N4O3S
310.379000
LQQSOCLYTRMQNW-CEWYYZTQSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM532164; PubChem:CID159428307
Local ready
Direct docking supported
E3L023024
BDB023024
US11208416, Example 64
Cc1ncnc2c1ccn2[C@@H]1OC(Cc2ccc(Cl)cc2CO)[C@@](C)(O)[C@H]1O
C20H22ClN3O4
403.866000
ZGTFXCLQCUFVNG-KSRCZVEISA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM532200; PubChem:CID162115869
Local ready
Direct docking supported
E3L023025
BDB023025
US11214574, Ex# 1B
Nc1ncnc2c1ccn2[C@@H]1O[C@H]([C@H]2OC(=O)c3cc(Cl)ccc32)[C@@H](O)[C@H]1O
C18H15ClN4O5
402.794000
LPOAVJUYEHAZNY-IQNXINDISA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM532953; PubChem:CID159419258
Local ready
Direct docking supported
E3L023026
BDB023026
BDBM532978
Nc1ncnc2c1ccn2C1O[C@H]([C@@H]2OCOCc3cc(Cl)ccc32)[C@@H](O)[C@H]1O
C19H19ClN4O5
418.837000
YHXNRAATIBEQER-XIYBEJTNSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM532978; PubChem:CID155117206
Local ready
Direct docking supported
E3L023027
BDB023027
BDBM532997
Cc1ncnc2c1ccn2C1O[C@H]([C@@H]2OCCCc3cc(Cl)ccc32)[C@@H](O)[C@H]1O
C21H22ClN3O4
415.877000
GBSQKWHBPQCVBZ-VQCHGODESA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM532997; PubChem:CID158208023
Local ready
Direct docking supported
E3L023028
BDB023028
BDBM532998
Nc1ncnc2c1ccn2C1O[C@H]([C@@H]2OCCCc3cc(Cl)ccc32)[C@@H](O)[C@H]1O
C20H21ClN4O4
416.865000
XKLKWJBIKTVKMG-SNRGRURWSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM532998; PubChem:CID161735894
Local ready
Direct docking supported
E3L023029
BDB023029
US11220509, Example 3
CCOC(=O)c1cn2c(NCc3c(F)ccc4occc34)ncc(Br)c2n1
C18H14BrFN4O3
433.237000
YFVGSCVBPNBEPB-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM533353; PubChem:CID139381694
Local ready
Direct docking supported
E3L023030
BDB023030
US11220509, Example 28
Cc1cc(-c2cnc(NCc3c(F)ccc4occc34)n3cc(C#N)nc23)n(C)n1
C21H16FN7O
401.405000
PIQTYJZWPJPBRT-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM533396; PubChem:CID156050897
Local ready
Direct docking supported
E3L023031
BDB023031
US11220524, Example 20
N/N=c1/nc[nH]c2c1ccn2[C@@H]1O[C@H]([C@H](O)c2ccc(Cl)cc2)[C@@H](O)[C@H]1O
C17H18ClN5O4
391.815000
XOAGRGZQXSOUHH-QFRSUPTLSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533402; PubChem:CID154029228
Local ready
Direct docking supported
E3L023032
BDB023032
Prmt5-IN-28
CO/N=c1/nc[nH]c2c1ccn2[C@@H]1O[C@H]([C@H](O)c2ccc(Cl)cc2)[C@@H](O)[C@H]1O
C18H19ClN4O5
406.826000
AMEIDIZPVPXFLE-KQVLKZGSSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533403; PubChem:CID135307505
Local ready
Direct docking supported
E3L023033
BDB023033
US11220524, Example 37
O/N=c1/nc[nH]c2c1ccn2[C@@H]1O[C@H]([C@H](O)c2ccc(Cl)cc2)[C@@H](O)[C@H]1O
C17H17ClN4O5
392.799000
KFTWIUQJWMRJQW-QFRSUPTLSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533404; PubChem:CID135307508
Local ready
Direct docking supported
E3L023034
BDB023034
US11220524, Example 52
CN/N=c1/nc[nH]c2c1ncn2[C@@H]1O[C@H]([C@H](O)c2ccc(Cl)cc2)[C@@H](O)[C@H]1O
C17H19ClN6O4
406.830000
COBTYSONMAWLCH-QFRSUPTLSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533405; PubChem:CID135307440
Local ready
Direct docking supported
E3L023035
BDB023035
US11220524, Example 39
N/N=c1/nc[nH]c2c1ncn2[C@@H]1O[C@H]([C@H](O)c2ccc(Cl)cc2)[C@@H](O)[C@H]1O
C16H17ClN6O4
392.803000
INQRYZHNGDLKHC-ZUSNOYAUSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533406; PubChem:CID135307433
Local ready
Direct docking supported
E3L023036
BDB023036
US11220524, Example 62
CO/N=c1/nc[nH]c2c1ccn2[C@@H]1O[C@H]([C@H](O)c2ccc(Cl)c(F)c2)[C@@H](O)[C@H]1O
C18H18ClFN4O5
424.816000
IAKJMOBYLLVGKR-KQVLKZGSSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533407; PubChem:CID135307624
Local ready
Direct docking supported
E3L023037
BDB023037
US11220524, Example 63
O/N=c1/nc[nH]c2c1ccn2[C@@H]1O[C@H]([C@H](O)c2ccc(Cl)c(F)c2)[C@@H](O)[C@H]1O
C17H16ClFN4O5
410.789000
KCLDZPHNBLIJFB-QFRSUPTLSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533408; PubChem:CID135307658
Local ready
Direct docking supported
E3L023038
BDB023038
BDBM533409
CN/N=c1\nc[nH]c2c1ccn2[C@@H]1O[C@H]([C@H](O)c2ccc(Cl)cc2)[C@@H](O)[C@H]1O
C18H20ClN5O4
405.842000
OSOFWQCHKHEEPX-KQVLKZGSSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533409; PubChem:CID135307634
Local ready
Direct docking supported
E3L023039
BDB023039
US11220524, Example 54
O/N=c1/nc[nH]c2c1ncn2[C@@H]1O[C@H]([C@H](O)c2ccc(Cl)cc2)[C@@H](O)[C@H]1O
C16H16ClN5O5
393.787000
NSMBYAYVWMBIQC-ZUSNOYAUSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533410; PubChem:CID135307422
Local ready
Direct docking supported
E3L023040
BDB023040
US11220524, Example 53
CO/N=c1/nc[nH]c2c1ncn2[C@@H]1O[C@H]([C@H](O)c2ccc(Cl)cc2)[C@@H](O)[C@H]1O
C17H18ClN5O5
407.814000
VXAALQOXDNWXAM-QFRSUPTLSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533411; PubChem:CID135307402
Local ready
Direct docking supported