E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L023001
BDB023001
BDBM530412
CO[C@H]1CC[C@H](Nc2ncc3c(n2)CN(C(=O)[C@H]2CCN(C)C[C@@H]2c2ccccc2)[C@H]2C[C@@H]32)CC1
C28H37N5O2
475.637000
NWQXULCLHZFMAJ-KNCNJFNZSA-N P51948 Cyclin-H
BindingDB
BindingDB:BDBM530412
Local ready
Direct docking supported
E3L023002
BDB023002
BDBM530413
Cc1cccc([C@@H]2CN(C)CC[C@H]2C(=O)N2Cc3nc(Nc4cnn(C)c4)ncc3[C@@H]3C[C@@H]32)c1
C26H31N7O
457.582000
MJGXMKHXJHQKDV-RDCABSMISA-N P51948 Cyclin-H
BindingDB
BindingDB:BDBM530413
Local ready
Direct docking supported
E3L023003
BDB023003
BDBM530414
Cc1cccc([C@H]2CN(C)CC[C@@H]2C(=O)N2Cc3nc(Nc4cnn(C)c4)ncc3[C@@H]3C[C@@H]32)c1
C26H31N7O
457.582000
MJGXMKHXJHQKDV-QRVLJTFESA-N P51948 Cyclin-H
BindingDB
BindingDB:BDBM530414
Local ready
Direct docking supported
E3L023004
BDB023004
BDBM530415
C[C@@H]1Cc2cnc(NC3CCOCC3)nc2CN1C(=O)N1CCN(C)C[C@@H]1c1ccccc1
C25H34N6O2
450.587000
VCDXKVSUQVNUPB-WZONZLPQSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM530415; PubChem:CID163200344
Local ready
Direct docking supported
E3L023005
BDB023005
BDBM530416
CN1CCN(C(=O)N2Cc3nc(NC4CCOCC4)ncc3CC2(C)C)[C@@H](c2ccccc2)C1
C26H36N6O2
464.614000
FOBMBELMBHICIM-HSZRJFAPSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM530416; PubChem:CID163200345
Local ready
Direct docking supported
E3L023006
BDB023006
BDBM530417
CC(C)N1CCN(C(=O)N2Cc3nc(NC4CCOCC4)ncc3C[C@H]2C)[C@@H](c2ccccc2)C1
C27H38N6O2
478.641000
OTQKMFXZFVQNPD-CJFMBICVSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM530417; PubChem:CID163200346
Local ready
Direct docking supported
E3L023007
BDB023007
BDBM530418
C[C@H]1Cc2cnc(NC3(c4ccccc4)COC3)cc2CN1C(=O)[C@H]1CCN(C)C[C@@H]1c1ccccc1
C31H36N4O2
496.655000
SBXUVFLJUOJULC-QLCOJLISSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM530418; PubChem:CID163200347
Local ready
Direct docking supported
E3L023008
BDB023008
BDBM530419
C[C@H]1Cc2cnc(Nc3cnn(C)c3)cc2CN1C(=O)[C@H]1CCN(C)C[C@@H]1c1ccccc1
C26H32N6O
444.583000
ZSPKGLQDWCDKNG-GKVQRAMASA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM530419; PubChem:CID163200348
Local ready
Direct docking supported
E3L023009
BDB023009
BDBM530420
CO[C@H]1CC[C@H](Nc2cc3c(cn2)C[C@H](C)N(C(=O)C2CCN(C)CC2c2cccc(C)c2)C3)CC1
C30H42N4O2
490.692000
VYPXLUSXPNXRRO-FSSQJUNMSA-N P51948 Cyclin-H
BindingDB
BindingDB:BDBM530420
Local ready
Direct docking supported
E3L023010
BDB023010
BDBM530421
CO[C@H]1CC[C@H](Nc2cc3c(cn2)C[C@H](C)N(C(=O)[C@@H]2CCN(C)C[C@H]2c2cccc(C)c2)C3)CC1
C30H42N4O2
490.692000
VYPXLUSXPNXRRO-BKNMONHFSA-N P51948 Cyclin-H
BindingDB
BindingDB:BDBM530421
Local ready
Direct docking supported
E3L023011
BDB023011
BDBM530422
C[C@@H]1Cc2cnc(NC3CCOCC3)nc2CN1C(=O)N1CCNC[C@@H]1c1ccccc1
C24H32N6O2
436.560000
AOPULEPXSRWMEU-VGOFRKELSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM530422; PubChem:CID163200351
Local ready
Direct docking supported
E3L023012
BDB023012
BDBM530423
C[C@@H]1Cc2cnc(NC3CCN(S(C)(=O)=O)CC3)nc2CN1C(=O)N1CCN(C)C[C@@H]1c1ccccc1
C26H37N7O3S
527.695000
SNWVMKZGGAITBS-NTKDMRAZSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM530423; PubChem:CID163200352
Local ready
Direct docking supported
E3L023013
BDB023013
BDBM530424
C[C@@H]1Cc2cnc(NC3CCN(S(=O)(=O)C4CC4)CC3)nc2CN1C(=O)N1CCN(C)C[C@@H]1c1ccccc1
C28H39N7O3S
553.733000
KGUMFAWGZPNUEW-FQRUVTKNSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM530424; PubChem:CID163200353
Local ready
Direct docking supported
E3L023014
BDB023014
BDBM530425
C[C@@H]1Cc2cnc(NC3CCN(S(=O)(=O)N(C)C)CC3)nc2CN1C(=O)N1CCN(C)C[C@@H]1c1ccccc1
C27H40N8O3S
556.737000
SEGFKKZKDIJBSY-CJFMBICVSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM530425; PubChem:CID163200354
Local ready
Direct docking supported
E3L023015
BDB023015
BDBM530426
C[C@H]1Cc2cnc(NC3CCOCC3)nc2CN1C(=O)N1CCN(C)C[C@H]1c1cccc(F)c1
C25H33FN6O2
468.577000
BLLZHXZECKWOMV-SBUREZEXSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM530426; PubChem:CID163200355
Local ready
Direct docking supported
E3L023016
BDB023016
BDBM530427
C[C@@H]1Cc2cnc(NCc3ccn(C)n3)nc2CN1C(=O)N1CCN(C)C[C@@H]1c1ccccc1
C25H32N8O
460.586000
PAMKRBCAEQZZRE-WZONZLPQSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM530427; PubChem:CID163200356
Local ready
Direct docking supported
E3L023017
BDB023017
BDBM530428
C[C@@H]1Cc2cnc(NC3CCS(=O)(=O)CC3)nc2CN1C(=O)N1CCN(C)C[C@@H]1c1ccccc1
C25H34N6O3S
498.653000
VINIZKSQBWUQIG-WZONZLPQSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM530428; PubChem:CID163200357
Local ready
Direct docking supported
E3L023018
BDB023018
US11207325, Example 110
OCCC1CCN(CCc2ccc(-c3cnc(NCc4cccc5c4CCO5)n4cnnc34)cn2)CC1
C28H33N7O2
499.619000
LYOFYQHRLNMKFX-UHFFFAOYSA-N O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM531187; PubChem:CID155206297
Local ready
Direct docking supported
E3L023019
BDB023019
US11207325, Example 148
CC(C)n1cc(-c2cnc(NCc3c(F)ccc4c3CCO4)n3cnnc23)c(C(F)(F)F)n1
C21H19F4N7O
461.423000
OJEVEQVEKLNTSJ-UHFFFAOYSA-N O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM531225; PubChem:CID121432904
Local ready
Direct docking supported
E3L023020
BDB023020
US11207325, Example 159
COCCn1nc(C)c(-c2cnc(NCc3c(F)ccc4c3CCO4)n3cnnc23)c1C
C22H24FN7O2
437.479000
QQNPDWBNYQVGAI-UHFFFAOYSA-N O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM531236; PubChem:CID121433078
Local ready
Direct docking supported