E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L025521
BDB025521
US11312723, Example 204
Cc1cccc2c1NCC[C@@H]2C(=O)n1nc2c(c1N)CCN(CCO)C2
C19H25N5O2
355.442000
PZWQMRHZXWXBJD-AWEZNQCLSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM552028; PubChem:CID155643098
Local ready
Direct docking supported
E3L025522
BDB025522
US11312723, Example 205
Cc1cccc2c1NCC[C@H]2C(=O)n1nc2c(c1N)CCN(CCO)C2
C19H25N5O2
355.442000
PZWQMRHZXWXBJD-CQSZACIVSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM552029; PubChem:CID155330732
Local ready
Direct docking supported
E3L025523
BDB025523
WO2022103411, Example S1
CC(C)[C@@H](C(=O)N1C[C@H](O)CC1C(=O)N[C@H](Cc1ccc(-c2ccccc2)cc1)C(N)=O)n1cc(C2CC2)nn1
C30H36N6O4
544.656000
ONVKLPZAABEJOY-ZVAIXIBVSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552683; PubChem:CID164607730
Local ready
Direct docking supported
E3L025524
BDB025524
WO2022103411, Example S3
CC(C)(C)[C@@H](C(=O)N1C[C@H](O)CC1C(=O)N[C@H](Cc1ccc(-c2ccccc2)cc1)C(N)=O)n1cc(C2CC2)nn1
C31H38N6O4
558.683000
DPJOJCHWMWBSKQ-JXPRAFDXSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552684; PubChem:CID164607731
Local ready
Direct docking supported
E3L025525
BDB025525
WO2022103411, Example S14
CC(=O)NCCOCc1cn([C@H](C(=O)N2C[C@H](O)CC2C(=O)N[C@H](Cc2ccc(-c3ccccc3)cc2)C(N)=O)C(C)(C)C)nn1
C33H43N7O6
633.750000
ZZWDGXXZRUGUSA-HWMCGDIZSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552685; PubChem:CID164607732
Local ready
Direct docking supported
E3L025526
BDB025526
WO2022103411, Example S24
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](n2cc(C3CC3)nn2)C(C)(C)C)cc1
C27H34N6O3S
522.675000
KTXIDFFZCOJFLJ-JCTONOIOSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552686; PubChem:CID146151217
Local ready
Direct docking supported
E3L025527
BDB025527
WO2022103411, Example S27
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](n2cc(Cc3ccccc3)nn2)C(C)(C)C)cc1
C31H36N6O3S
572.735000
HTIYTKHOMNYAKR-FULLSBAXSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552687; PubChem:CID163300581
Local ready
Direct docking supported
E3L025528
BDB025528
WO2022103411, Example S2
C[C@@H](C(=O)N1C[C@H](O)CC1C(=O)N[C@H](Cc1ccc(-c2ccccc2)cc1)C(N)=O)n1cc(C2CC2)nn1
C28H32N6O4
516.602000
RCUWCPGQGZBXIJ-KKFMQVGYSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552688; PubChem:CID164607733
Local ready
Direct docking supported
E3L025529
BDB025529
WO2022103411, Example S4
NC(=O)[C@@H](Cc1ccc(-c2ccccc2)cc1)NC(=O)C1C[C@@H](O)CN1C(=O)[C@H](C1CCC1)n1cc(C2CC2)nn1
C31H36N6O4
556.667000
DXCFMJMLSKBAGH-VFLSMOPBSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552689; PubChem:CID164607734
Local ready
Direct docking supported
E3L025530
BDB025530
WO2022103411, Example S5
CCC(C)[C@@H](C(=O)N1C[C@H](O)CC1C(=O)N[C@H](Cc1ccc(-c2ccccc2)cc1)C(N)=O)n1cc(C2CC2)nn1
C31H38N6O4
558.683000
GGVMIEIIPMPQOR-VVQZKFCISA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552690; PubChem:CID164607735
Local ready
Direct docking supported
E3L025531
BDB025531
WO2022103411, Example S6
CCC(C)(C)[C@@H](C(=O)N1C[C@H](O)CC1C(=O)N[C@H](Cc1ccc(-c2ccccc2)cc1)C(N)=O)n1cc(C2CC2)nn1
C32H40N6O4
572.710000
YANFJUZPCPHVNG-UWXXIFDUSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552691; PubChem:CID164607736
Local ready
Direct docking supported
E3L025532
BDB025532
WO2022103411, Example S7
C=CC(C)(C)[C@@H](C(=O)N1C[C@H](O)CC1C(=O)N[C@H](Cc1ccc(-c2ccccc2)cc1)C(N)=O)n1cc(C2CC2)nn1
C32H38N6O4
570.694000
OIQDXSNETXYIIJ-UWXXIFDUSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552692; PubChem:CID164607737
Local ready
Direct docking supported
E3L025533
BDB025533
WO2022103411, Example S8
NC(=O)[C@@H](Cc1ccc(-c2ccccc2)cc1)NC(=O)C1C[C@@H](O)CN1C(=O)[C@H](C1C2CC3CC(C2)CC1C3)n1cc(C2CC2)nn1
C37H44N6O4
636.797000
PMYQGLYLBPCRDP-VSNSSFDBSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552693; PubChem:CID164607738
Local ready
Direct docking supported
E3L025534
BDB025534
WO2022103411, Example S9
CC(C)(C)[C@@H](C(=O)N1C[C@H](O)C[C@H]1C(=O)N[C@H](Cc1ccc(-c2ccccc2)cc1)C(N)=O)n1ccnn1
C28H34N6O4
518.618000
SFONCPIWPDSZRH-JLLPCOHGSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552694; PubChem:CID164607739
Local ready
Direct docking supported
E3L025535
BDB025535
WO2022103411, Example S10
COCc1cn([C@H](C(=O)N2C[C@H](O)C[C@H]2C(=O)N[C@H](Cc2ccc(-c3ccccc3)cc2)C(N)=O)C(C)(C)C)nn1
C30H38N6O5
562.671000
KNYWAKZMVVONRX-FXSWLTOZSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552695; PubChem:CID163300687
Local ready
Direct docking supported
E3L025536
BDB025536
WO2022103411, Example S11
CC(C)(C)[C@@H](C(=O)N1C[C@H](O)C[C@H]1C(=O)N[C@H](Cc1ccc(-c2ccccc2)cc1)C(N)=O)n1cc(Cc2ccccc2)nn1
C35H40N6O4
608.743000
CVCDUVOUMONHJI-LTXXGDHTSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552696; PubChem:CID163300723
Local ready
Direct docking supported
E3L025537
BDB025537
WO2022103411, Example S12
CC(=O)NCC1(c2cn([C@@H](C(=O)N3C[C@H](O)C[C@H]3C(=O)N[C@H](Cc3ccc(-c4ccccc4)cc3)C(N)=O)C(C)(C)C)nn2)CC1
C34H43N7O5
629.762000
CWWVAMCMVVGTPN-DIBLIPFTSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552697; PubChem:CID163300651
Local ready
Direct docking supported
E3L025538
BDB025538
WO2022103411, Example S13
CC(=O)NCC1(c2cn([C@H](C(=O)N3C[C@H](O)C[C@H]3C(=O)N[C@H](Cc3ccc(-c4ccccc4)cc3)C(N)=O)C(C)(C)C)nn2)CC1
C34H43N7O5
629.762000
CWWVAMCMVVGTPN-CITHKVLSSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552698; PubChem:CID163300612
Local ready
Direct docking supported
E3L025539
BDB025539
WO2022103411, Example S15
CC(C)(C)[C@@H](C(=O)N1C[C@H](O)C[C@H]1C(=O)N[C@H](Cc1ccc(-c2ccccc2)cc1)C(N)=O)n1cc(C(=O)O)nn1
C29H34N6O6
562.627000
FYOISBUPTLVIMN-CJTFWIGWSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552699; PubChem:CID163300714
Local ready
Direct docking supported
E3L025540
BDB025540
WO2022103411, Example S16
CC(C)(C)[C@@H](C(=O)N1C[C@H](O)C[C@H]1C(=O)N[C@H](Cc1ccc(-c2ccccc2)cc1)C(N)=O)n1cc(C(N)=O)nn1
C29H35N7O5
561.643000
YDQCNPGWFYTEAH-CJTFWIGWSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552700; PubChem:CID163300658
Local ready
Direct docking supported