E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L025561
BDB025561
WO2022103411, Example S36B
CC(C)[C@H](C(=O)N1C[C@H](O)C[C@H]1C(=O)N[C@H](Cc1ccc(-c2ccccc2)cc1)C(N)=O)n1nnc2ccccc21
C31H34N6O4
554.651000
ZZSWGKMAOURNGP-HWGYZFRUSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552721; PubChem:CID163300660
Local ready
Direct docking supported
E3L025562
BDB025562
WO2022103411, Example S37
Cc1nnn([C@H](C(=O)N2C[C@H](O)C[C@H]2C(=O)N[C@H](Cc2ccc(-c3ccccc3)cc2)C(N)=O)C(C)C)c1C
C29H36N6O4
532.645000
VXLQQFJLYAIHIX-XPGKHFPBSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552722; PubChem:CID163300638
Local ready
Direct docking supported
E3L025563
BDB025563
WO2022103411, Example S38
CC(C)[C@@H](C(=O)N1C[C@H](O)C[C@H]1C(=O)N[C@H](Cc1ccc(-c2ccccc2)cc1)C(N)=O)n1cc(-c2cccs2)nn1
C31H34N6O4S
586.718000
NPDWWTOJBKIHOV-SEDKXUNQSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552723; PubChem:CID163300710
Local ready
Direct docking supported
E3L025564
BDB025564
WO2022103411, Example S39
CC(C)[C@@H](C(=O)N1C[C@H](O)C[C@H]1C(=O)N[C@H](Cc1ccc(-c2ccccc2)cc1)C(N)=O)n1cc(-c2ccco2)nn1
C31H34N6O5
570.650000
FOBVREGTSGXOOU-SEDKXUNQSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552724; PubChem:CID163300632
Local ready
Direct docking supported
E3L025565
BDB025565
WO2022103411, Example S40
Cc1ncsc1-c1ccc([C@@H](NC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](n2cc(C3CC3)nn2)C(C)(C)C)C(F)(F)F)cc1
C28H33F3N6O3S
590.672000
RUFFBTSQMOUGGE-NZRJUOQRSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552725; PubChem:CID163300728
Local ready
Direct docking supported
E3L025566
BDB025566
WO2022103411, Example S41
C[C@H](NC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@@H](n1cc(C2CC2)nn1)C(C)(C)C)c1ccc(-c2ccccc2F)cc1
C30H36FN5O3
533.648000
ZFCNGNWGQZFKMX-ICTPLHBVSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552726; PubChem:CID163300589
Local ready
Direct docking supported
E3L025567
BDB025567
WO2022103411, Example S42
C[C@@H](NC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@@H](n1cc(C2CC2)nn1)C(C)(C)C)c1ccc(-c2ccccc2F)cc1
C30H36FN5O3
533.648000
ZFCNGNWGQZFKMX-NETYICIZSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552727; PubChem:CID163300585
Local ready
Direct docking supported
E3L025568
BDB025568
WO2022103411, Example S43
CC(C)(C)[C@@H](C(=O)N1C[C@H](O)C[C@H]1C(=O)NCc1ccc(-c2ccccc2F)cc1)n1cc(C2CC2)nn1
C29H34FN5O3
519.621000
OJJGAZIJCYHMEE-QGUKFAFCSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552728; PubChem:CID163300703
Local ready
Direct docking supported
E3L025569
BDB025569
BDBM552729
Cc1ncsc1-c1ccc2c(c1)CCCC[C@@H]2NC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@@H](n1cc(C2CC2)nn1)C(C)(C)C
C31H40N6O3S
576.767000
IAVGSVXQQSNQFO-PWKYGKGFSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB
BindingDB:BDBM552729
Local ready
Direct docking supported
E3L025570
BDB025570
WO2022103411, Example S45
Cc1ncsc1-c1ccc2c(c1)CCCC[C@H]2NC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@@H](n1cc(C2CC2)nn1)C(C)(C)C
C31H40N6O3S
576.767000
IAVGSVXQQSNQFO-PVRUFOIFSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552730; PubChem:CID163300602
Local ready
Direct docking supported
E3L025571
BDB025571
WO2022103411, Example S46
C[C@H](NC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@@H](n1cc(C2CC2)nn1)C(C)(C)C)c1ccc(-c2ccccc2Cl)cc1
C30H36ClN5O3
550.103000
RQQIYJWFXPPPSS-ICTPLHBVSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552731; PubChem:CID163300514
Local ready
Direct docking supported
E3L025572
BDB025572
WO2022104345, Example S1
CC(C)(C)[C@@H](C(=O)N1C[C@H](O)C[C@H]1C(N)=O)n1cc(C2CC2)nn1
C16H25N5O3
335.408000
CGXDADSNPGGRLO-KGYLQXTDSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552732; PubChem:CID163303100
Local ready
Direct docking supported
E3L025573
BDB025573
WO2022104345, Example S2
CNC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@@H](n1cc(C2CC2)nn1)C(C)(C)C
C17H27N5O3
349.435000
GXSUEAFWBWTLRN-KWCYVHTRSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552733; PubChem:CID163303103
Local ready
Direct docking supported
E3L025574
BDB025574
WO2022104345, Example S3
CNC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@H](C1CCCCC1)n1cc(C2CC2)nn1
C19H29N5O3
375.473000
DPUCAEZMSVQIIO-PVAVHDDUSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552734; PubChem:CID163303089
Local ready
Direct docking supported
E3L025575
BDB025575
WO2022104345, Example S4
CNC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@@H](n1ccnn1)C(C)(C)C
C14H23N5O3
309.370000
SFAYSAFVAUDDET-OUAUKWLOSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552735; PubChem:CID163302957
Local ready
Direct docking supported
E3L025576
BDB025576
WO2022104345, Example S5
CNC(=O)[C@@H]1C[C@@H](O)CN1C(=O)C(n1cc(C2CC2)nn1)C1(C)CCCCC1
C20H31N5O3
389.500000
VCHRIGHFKKNEQU-UMFITKPXSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552736; PubChem:CID163302993
Local ready
Direct docking supported
E3L025577
BDB025577
WO2022104345, Example S6
CNC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@H](C1CCOCC1)n1cc(C2CC2)nn1
C18H27N5O4
377.445000
XHMKHTSVAOMZCX-KBMXLJTQSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552737; PubChem:CID163302984
Local ready
Direct docking supported
E3L025578
BDB025578
WO2022104345, Example S7
CNC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@H](C1CCNCC1)n1cc(C2CC2)nn1
C18H28N6O3
376.461000
SBEJRVDUARXLSH-KBMXLJTQSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552738; PubChem:CID163302842
Local ready
Direct docking supported
E3L025579
BDB025579
WO2022104345, Example S8
CNC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@H](C1CCN(C)CC1)n1cc(C2CC2)nn1
C19H30N6O3
390.488000
FEOGKHQYBYMQAO-PVAVHDDUSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552739; PubChem:CID163303013
Local ready
Direct docking supported
E3L025580
BDB025580
WO2022104345, Example S9
CNC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@H](C1CCN(C(C)=O)CC1)n1cc(C2CC2)nn1
C20H30N6O4
418.498000
MLVNDJLRMRQAHY-NJAFHUGGSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM552740; PubChem:CID163302934
Local ready
Direct docking supported