E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L026501
BDB026501
US11365205, Example 84
Cn1cnc2ccc(Cn3c(=O)n(CC(O)CN4CCc5ccccc5C4)c4ccccc43)cc21
C28H29N5O2
467.573000
DTFULKURTJXYSJ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558819; PubChem:CID139513049
Local ready
Direct docking supported
E3L026502
BDB026502
US11365205, Example 84a
Cn1cnc2ccc(Cn3c(=O)n(C[C@H](O)CN4CCc5ccccc5C4)c4ccccc43)cc21
C28H29N5O2
467.573000
DTFULKURTJXYSJ-HSZRJFAPSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558820; PubChem:CID165112657
Local ready
Direct docking supported
E3L026503
BDB026503
US11365205, Example 85
Cc1ccc(Cn2c(=O)n(C[C@@H](O)CN3CCc4ccccc4C3)c3ccccc32)cc1
C27H29N3O2
427.548000
HBNOWLIJWDQXCK-DEOSSOPVSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558821; PubChem:CID165112658
Local ready
Direct docking supported
E3L026504
BDB026504
US11365205, Example 86
O=c1n(Cc2ccc(Cl)cc2)c2ccccc2n1CC(O)CN1CCc2ccccc2C1
C26H26ClN3O2
447.966000
XMEWKIRQFJDJGN-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558822; PubChem:CID139526861
Local ready
Direct docking supported
E3L026505
BDB026505
US11365205, Example 87
Cc1ccccc1Cn1c(=O)n(CC(O)CN2CCc3ccccc3C2)c2ccccc21
C27H29N3O2
427.548000
KKOTWRPPUAESJB-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558823; PubChem:CID139526863
Local ready
Direct docking supported
E3L026506
BDB026506
US11365205, Example 88
Cc1ccc(Cn2c(=O)n(CC(O)CN3CCc4ccccc4C3)c3ccccc32)cn1
C26H28N4O2
428.536000
FVVBRLOEAZUQPK-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558824; PubChem:CID139526825
Local ready
Direct docking supported
E3L026507
BDB026507
US11365205, Example 89
N#Cc1ccc(Cn2c(=O)n(CC(O)CN3CCc4ccccc4C3)c3ccccc32)cc1
C27H26N4O2
438.531000
LNBAKRYYBIIMOS-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558825; PubChem:CID139526819
Local ready
Direct docking supported
E3L026508
BDB026508
US11365205, Example 90
Cc1cccc(Cn2c(=O)n(CC(O)CN3CCc4ccccc4C3)c3ccccc32)c1
C27H29N3O2
427.548000
WAZIZEGNSROFLR-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558826; PubChem:CID139526828
Local ready
Direct docking supported
E3L026509
BDB026509
US11365205, Example 91
N#Cc1ccc(Cn2c(=O)n(CC(O)CN3CCc4ccccc4C3)c3ccccc32)cn1
C26H25N5O2
439.519000
MBCRTGRICDAYDI-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558827; PubChem:CID139526820
Local ready
Direct docking supported
E3L026510
BDB026510
US11365205, Example 92
N#Cc1ccc(Cn2c(=O)n(CC(O)CN3CCc4ccccc4C3)c3ccccc32)nc1
C26H25N5O2
439.519000
BTJJEEDYJDOEMJ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558828; PubChem:CID139526972
Local ready
Direct docking supported
E3L026511
BDB026511
US11365205, Example 93
N#Cc1ccc(-n2c(=O)n(CC(O)CN3CCc4ccccc4C3)c3ccccc32)cc1
C26H24N4O2
424.504000
SGVMZCWGWXPKOQ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558829; PubChem:CID139513356
Local ready
Direct docking supported
E3L026512
BDB026512
US11365205, Example 94
COc1ccc(Cn2c(=O)n(CC(O)CN3CCc4ccccc4C3)c3cccnc32)cc1
C26H28N4O3
444.535000
PMDWLSNCRHMECM-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558830; PubChem:CID139527213
Local ready
Direct docking supported
E3L026513
BDB026513
US11365205, Example 95
COc1ccc(Cn2c(=O)n(CC(O)CN3CCc4ccccc4C3)c3cc(C#N)ccc32)cc1
C28H28N4O3
468.557000
WFOGUARPBYCIFU-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558831; PubChem:CID139513117
Local ready
Direct docking supported
E3L026514
BDB026514
US11365205, Example 96
COc1ccc(Cn2c(=O)n(CC(O)CN3CCc4ccccc4C3)c3cc(F)ccc32)cc1
C27H28FN3O3
461.537000
VKBBACSRDOEKAX-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558832; PubChem:CID139511071
Local ready
Direct docking supported
E3L026515
BDB026515
US11365205, Example 97
CS(=O)(=O)c1ccc(Cn2c(=O)n(CC(O)CN3CCc4ccccc4C3)c3cc(F)ccc32)cc1
C27H28FN3O4S
509.603000
PNKGVHUHKTWGOK-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558833; PubChem:CID139527253
Local ready
Direct docking supported
E3L026516
BDB026516
US11365205, Example 98
N#Cc1ccc(Cn2c(=O)n(CC(O)CN3CCc4ccccc4C3)c3cc(F)ccc32)nc1
C26H24FN5O2
457.509000
TZNCWGDQYQAIIT-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558834; PubChem:CID139512959
Local ready
Direct docking supported
E3L026517
BDB026517
US11365205, Example 99
N#Cc1ccc(Cn2c(=O)n(CC(O)CN3CCc4ccccc4C3)c3ncccc32)nc1
C25H24N6O2
440.507000
DOFFNHBABIEYIT-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558835; PubChem:CID139513274
Local ready
Direct docking supported
E3L026518
BDB026518
US11365205, Example 100
N#Cc1ccc(CN2C(=O)N(CC(O)CN3CCc4ccccc4C3)[C@@H]3CCCC[C@H]32)cc1
C27H32N4O2
444.579000
WSTWPTNDGQBTIK-KPRFIHOGSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558836; PubChem:CID139513054
Local ready
Direct docking supported
E3L026519
BDB026519
US11365205, Example 101
N#Cc1ccc(CN2C(=O)N(CC(O)CN3CCc4ccccc4C3)[C@@H]3CCCC[C@@H]32)cc1
C27H32N4O2
444.579000
WSTWPTNDGQBTIK-XBCLTQTASA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558837; PubChem:CID155461804
Local ready
Direct docking supported
E3L026520
BDB026520
US11365205, Example 102
N#Cc1cnc(CN2CCN(C[C@H](O)CN3CCc4ccccc4C3)C2=O)c(C(=O)N2CCCCC2)c1
C28H34N6O3
502.619000
APISITDMSAWXDI-XMMPIXPASA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558838; PubChem:CID139513199
Local ready
Direct docking supported