E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L026481
BDB026481
US11365205, Example 66
CS(=O)(=O)c1ccc(CN2CCN(C[C@H](O)CN3CCc4ccccc4C3)C2=O)cc1
C23H29N3O4S
443.569000
ACMUUVXHBJKNMB-OAQYLSRUSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558799; PubChem:CID139526832
Local ready
Direct docking supported
E3L026482
BDB026482
US11365205, Example 67
O=C1N(Cc2ccc(S(=O)(=O)C3CC3)cc2)CCN1C[C@H](O)CN1CCc2ccccc2C1
C25H31N3O4S
469.607000
UDWLJIOTNBATOE-JOCHJYFZSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558800; PubChem:CID139526831
Local ready
Direct docking supported
E3L026483
BDB026483
US11365205, Example 68
O=C1N(Cc2ccc(S(=O)(=O)N3CCCC3)cc2)CCN1C[C@H](O)CN1CCc2ccccc2C1
C26H34N4O4S
498.649000
KWNUBURHAXRRFW-XMMPIXPASA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558801; PubChem:CID139526833
Local ready
Direct docking supported
E3L026484
BDB026484
US11365205, Example 69
O=C1N(Cc2ccc(S(=O)(=O)N3CCCCC3)cc2)CCN1C[C@H](O)CN1CCc2ccccc2C1
C27H36N4O4S
512.676000
XONGKOCVDOMGMY-RUZDIDTESA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558802; PubChem:CID139526836
Local ready
Direct docking supported
E3L026485
BDB026485
US11365205, Example 70
O=C1N(Cc2cccc(S(=O)(=O)N3CCCC3)c2)CCN1C[C@H](O)CN1CCc2ccccc2C1
C26H34N4O4S
498.649000
BGTDOBZVBMNXKM-XMMPIXPASA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558803; PubChem:CID139526837
Local ready
Direct docking supported
E3L026486
BDB026486
US11365205, Example 71
O=C1N(Cc2ccc(S(=O)(=O)N3CCCC3)cn2)CCN1C[C@H](O)CN1CCc2ccccc2C1
C25H33N5O4S
499.637000
FILYWHWELPBJFG-HSZRJFAPSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558804; PubChem:CID139526840
Local ready
Direct docking supported
E3L026487
BDB026487
US11365205, Example 72
CC(=O)N1CCC(Nc2cc(CN3CCN(C[C@H](O)CN4CCc5ccccc5C4)C3=O)ccn2)CC1
C28H38N6O3
506.651000
ISROTIMDIBEBDY-AREMUKBSSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558805; PubChem:CID139527162
Local ready
Direct docking supported
E3L026488
BDB026488
US11365205, Example 73
N#Cc1ccc(CN2C(=O)CN(CC(O)CN3CCc4ccccc4C3)C2=O)nc1
C22H23N5O3
405.458000
MNNIICYLHKSQQI-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558806; PubChem:CID139513015
Local ready
Direct docking supported
E3L026489
BDB026489
US11365205, Example 74
CC1(C)C(=O)N(Cc2ccc(C#N)cn2)C(=O)N1CC(O)CN1CCc2ccccc2C1
C24H27N5O3
433.512000
YJZXROOIQOPOLQ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558807; PubChem:CID139513288
Local ready
Direct docking supported
E3L026490
BDB026490
US11365205, Example 75
COc1cc(CN2C(=O)N(CC(O)CN3CCc4ccccc4C3)C(C)(C)C2=O)ccc1C#N
C26H30N4O4
462.550000
DBUPUSWMCHNXSE-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558808; PubChem:CID139527165
Local ready
Direct docking supported
E3L026491
BDB026491
US11365205, Example 76
CC1(C)C(=O)N(Cc2ccc3c(c2)COCC3)C(=O)N1CC(O)CN1CCc2ccccc2C1
C27H33N3O4
463.578000
BSYJEZQQZQWAKM-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558809; PubChem:CID139527163
Local ready
Direct docking supported
E3L026492
BDB026492
US11365205, Example 77
CC1(C)C(=O)N(Cc2ccc(C(F)(F)F)cn2)C(=O)N1CC(O)CN1CCc2ccccc2C1
C24H27F3N4O3
476.499000
SIGQGKORMNWSFE-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558810; PubChem:CID139527166
Local ready
Direct docking supported
E3L026493
BDB026493
US11365205, Example 78
Cn1cc(CN2C(=O)N(CC(O)CN3CCc4ccccc4C3)C(C)(C)C2=O)ccc1=O
C24H30N4O4
438.528000
WXGLESZCNFRPTQ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558811; PubChem:CID139527164
Local ready
Direct docking supported
E3L026494
BDB026494
US11365205, Example 79
CC1(C)C(=O)N(Cc2ccc(S(C)(=O)=O)cc2)C(=O)N1CC(O)CN1CCc2ccccc2C1
C25H31N3O5S
485.606000
BBWPQSCNUNZTHC-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558812; PubChem:CID139527173
Local ready
Direct docking supported
E3L026495
BDB026495
US11365205, Example 80
Cc1ccc(CN2CC(C)N(CC(O)CN3CCc4ccccc4C3)C2=O)cc1
C24H31N3O2
393.531000
MKNOYSDZIVKCPL-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558813; PubChem:CID139513171
Local ready
Direct docking supported
E3L026496
BDB026496
US11365205, Example 81
Cc1ccc(CN2CC(c3ccccc3)N(CC(O)CN3CCc4ccccc4C3)C2=O)cc1
C29H33N3O2
455.602000
RQKAFTSMUVCZHU-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558814; PubChem:CID139511485
Local ready
Direct docking supported
E3L026497
BDB026497
US11365205, Example 82
N#Cc1ccc(Cn2ccn(CC(O)CN3CCc4ccccc4C3)c2=O)cc1
C23H24N4O2
388.471000
VDIIZHMFUSMRNC-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558815; PubChem:CID139513131
Local ready
Direct docking supported
E3L026498
BDB026498
US11365205, Example 82a
N#Cc1ccc(Cn2ccn(C[C@H](O)CN3CCc4ccccc4C3)c2=O)cc1
C23H24N4O2
388.471000
VDIIZHMFUSMRNC-JOCHJYFZSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558816; PubChem:CID165112655
Local ready
Direct docking supported
E3L026499
BDB026499
US11365205, Example 82b
N#Cc1ccc(Cn2ccn(C[C@@H](O)CN3CCc4ccccc4C3)c2=O)cc1
C23H24N4O2
388.471000
VDIIZHMFUSMRNC-QFIPXVFZSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558817; PubChem:CID165112656
Local ready
Direct docking supported
E3L026500
BDB026500
US11365205, Example 83
Cc1ccc(Cn2ccn(CC(O)CN3CCc4ccccc4C3)c2=O)cc1
C23H27N3O2
377.488000
VDPRTTASBRLXEJ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558818; PubChem:CID139527211
Local ready
Direct docking supported