E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L026521
BDB026521
US11365205, Example 103
CC(=O)N1CCN(C(=O)c2cc(C#N)cnc2CN2CCN(C[C@H](O)CN3CCc4ccccc4C3)C2=O)CC1
C29H35N7O4
545.644000
DKGPCESYTFDYAK-RUZDIDTESA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558839; PubChem:CID139527174
Local ready
Direct docking supported
E3L026522
BDB026522
US11365205, Example 104
O=C(Nc1ccc(CN2CCN(C[C@H](O)CN3CCc4ccccc4C3)C2=O)nc1)C1COC1
C25H31N5O4
465.554000
FXXYRYXBBUVUNY-HSZRJFAPSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558840; PubChem:CID139513084
Local ready
Direct docking supported
E3L026523
BDB026523
US11365205, Example 105
O=C(Nc1ccc(CN2CCN(C[C@H](O)CN3CCc4ccccc4C3)C2=O)nc1)C1CCCC1
C27H35N5O3
477.609000
KFTWJPYJBGSPCN-RUZDIDTESA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558841; PubChem:CID139527169
Local ready
Direct docking supported
E3L026524
BDB026524
US11365205, Example 106
O=C(Nc1ccc(CN2CCN(C[C@H](O)CN3CCc4ccccc4C3)C2=O)nc1)C1CCC1
C26H33N5O3
463.582000
NMNQMYXGZUJIKF-XMMPIXPASA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558842; PubChem:CID139527167
Local ready
Direct docking supported
E3L026525
BDB026525
US11365205, Example 107
O=C(Nc1ccc(CN2CCN(C[C@H](O)CN3CCc4ccccc4C3)C2=O)nc1)C1CCOCC1
C27H35N5O4
493.608000
RHLCHYYLKCLXKV-RUZDIDTESA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558843; PubChem:CID139527170
Local ready
Direct docking supported
E3L026526
BDB026526
US11365205, Example 108
O=C1N(Cc2ccc(NC3CCOCC3)cn2)CCN1C[C@H](O)CN1CCc2ccccc2C1
C26H35N5O3
465.598000
PPYDCTMHTZSRFS-RUZDIDTESA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558844; PubChem:CID139527044
Local ready
Direct docking supported
E3L026527
BDB026527
US11365205, Example 109
CC(=O)N1CCC(Nc2ccc(CN3CCN(C[C@H](O)CN4CCc5ccccc5C4)C3=O)nc2)CC1
C28H38N6O3
506.651000
ATGRJIJETUETJD-HHHXNRCGSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558845; PubChem:CID139527168
Local ready
Direct docking supported
E3L026528
BDB026528
US11365205, Example 110
O=C1N(Cc2ccc(C#CC3COC3)cn2)CCN1C[C@H](O)CN1CCc2ccccc2C1
C26H30N4O3
446.551000
AOSQGWUEZPSSNR-RUZDIDTESA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM558846; PubChem:CID139526973
Local ready
Direct docking supported
E3L026529
BDB026529
US11369605, Example 1
CC(C)N(C(=O)c1cc(F)ccc1Oc1cncnc1N1CC2(CCN(C(=O)[C@H]3N[C@H]4CC[C@@H]3C[C@@H]4CC3CC3)CC2)C1)C(C)C
C36H49FN6O3
632.825000
SKALBDQRURDSRO-XUOJJIKWSA-N Q03164 Menin
BindingDB, PubChem
BindingDB:BDBM558847; PubChem:CID146565077
Local ready
Direct docking supported
E3L026530
BDB026530
US11384066, Example 1
Cc1cc(Nc2ccc(F)c(CC3(C(=O)O)CCN(Cc4cccc(Cl)c4F)CC3)n2)n[nH]1
C23H24ClF2N5O2
475.927000
LGTBIYHSNLXDIA-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM560624; PubChem:CID159346105
Local ready
Direct docking supported
E3L026531
BDB026531
US11384066, Example 2
CCC1CC(Cc2nc(Nc3cc(C)[nH]n3)ccc2F)(C(=O)O)CCN1Cc1cccc(Cl)c1F
C25H28ClF2N5O2
503.981000
LWIKRSTVFVSLEM-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM560625; PubChem:CID156466215
Local ready
Direct docking supported
E3L026532
BDB026532
US11384066, Example 5
Cc1cc(Nc2nc(C[C@@]3(C(=O)O)CCN(Cc4cccc(Cl)c4F)[C@H](C)C3)ccc2F)[nH]n1
C24H26ClF2N5O2
489.954000
JODNFBDDCMSPPR-OYLFLEFRSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM560626; PubChem:CID163303830
Local ready
Direct docking supported
E3L026533
BDB026533
US11384066, Example 6
Cc1cc(Nc2ccc(F)c(C[C@@]3(C(=O)O)CCN(Cc4c(F)ccc(Cl)c4F)[C@H](C)C3)n2)n[nH]1
C24H25ClF3N5O2
507.944000
HYLCJGBRMUSQQL-JBEBIEQOSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM560627; PubChem:CID164812595
Local ready
Direct docking supported
E3L026534
BDB026534
US11384066, Example 8
CC[C@@H]1C[C@](Cc2nc(Nc3cc(C)[nH]n3)ccc2F)(C(=O)O)CCN1Cc1cccc(Cl)c1F
C25H28ClF2N5O2
503.981000
LWIKRSTVFVSLEM-CRICUBBOSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM560628; PubChem:CID164812712
Local ready
Direct docking supported
E3L026535
BDB026535
US11384066, Example 10
Cc1cc(Nc2ccc(C)c(C[C@@]3(C(=O)O)CCN(Cc4cccc(Cl)c4F)[C@H](C)C3)n2)n[nH]1
C25H29ClFN5O2
485.991000
VFSDCFPRAHKMGQ-CRICUBBOSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM560629; PubChem:CID153041131
Local ready
Direct docking supported
E3L026536
BDB026536
US11384066, Example 11
Cc1cc(Nc2ccc(Cl)c(C[C@@]3(C(=O)O)CCN(Cc4cccc(Cl)c4F)[C@H](C)C3)n2)n[nH]1
C24H26Cl2FN5O2
506.409000
YTDRMZITPHCTGY-OYLFLEFRSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM560630; PubChem:CID164812657
Local ready
Direct docking supported
E3L026537
BDB026537
US11384066, Example 12
Cc1cc(Nc2ccc(F)c(C[C@@]3(C(=O)O)CCN(Cc4c(F)cccc4F)[C@H](C)C3)n2)n[nH]1
C24H26F3N5O2
473.499000
NGEUZWFPCQLJJJ-OYLFLEFRSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM560631; PubChem:CID164812435
Local ready
Direct docking supported
E3L026538
BDB026538
US11384066, Example 15
Cc1cc(Nc2ccc(F)c(C[C@@]3(C(=O)O)CCN(Cc4cccc(F)c4F)[C@H](C)C3)n2)n[nH]1
C24H26F3N5O2
473.499000
ZLXRCPDTORAWNV-OYLFLEFRSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM560632; PubChem:CID164812751
Local ready
Direct docking supported
E3L026539
BDB026539
US11384066, Example 16
Cc1cc(Nc2ccc(F)c(C[C@@]3(C(=O)O)CCN(Cc4cccc(C)c4F)[C@H](C)C3)n2)n[nH]1
C25H29F2N5O2
469.536000
AVIIYQNUOXALQJ-CRICUBBOSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM560633; PubChem:CID164812676
Local ready
Direct docking supported
E3L026540
BDB026540
US11384066, Example 17
Cc1cc(Nc2ccc(F)c(C[C@@]3(C(=O)O)CCN(Cc4c(Cl)cccc4Cl)[C@H](C)C3)n2)n[nH]1
C24H26Cl2FN5O2
506.409000
ACTXWWQHJRICMT-OYLFLEFRSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM560634; PubChem:CID164812402
Local ready
Direct docking supported