E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L029701
BDB029701
BDBM595792
CNC(=O)c1ccc(N2CCN([C@H](C)c3cnc4cc(C)c(=O)[nH]c4c3)C[C@H]2C)cn1
C23H28N6O2
420.517000
VPAMXHQRZJKFAD-HZPDHXFCSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM595792; PubChem:CID169665442
Local ready
Direct docking supported
E3L029702
BDB029702
BDBM595793
CCNC(=O)c1ccc(N2CCN(Cc3cnc4cc(C5CC5)c(=O)[nH]c4c3)CC2)n(C)c1=O
C25H30N6O3
462.554000
PVZNOOYOPBGLQC-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM595793; PubChem:CID177668085
Local ready
Direct docking supported
E3L029703
BDB029703
BDBM595794
CNC(=O)c1ccc(N2CCN([C@@H](C)c3cnc4cc(C)c(=O)[nH]c4c3)CC2)cn1
C22H26N6O2
406.490000
YOIAKWKLDYXLFO-HNNXBMFYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM595794; PubChem:CID166021913
Local ready
Direct docking supported
E3L029704
BDB029704
BDBM595795
CNC(=O)c1ccc(N2CCN([C@H](C)c3cnc4cc(C)c(=O)[nH]c4c3)CC2)cn1
C22H26N6O2
406.490000
YOIAKWKLDYXLFO-OAHLLOKOSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM595795; PubChem:CID166021899
Local ready
Direct docking supported
E3L029705
BDB029705
BDBM595796
Cc1cc2ncc([C@H](C)N3CCN(c4ccc(C(=O)NC5CC5)nc4)CC3)cc2[nH]c1=O
C24H28N6O2
432.528000
KHEORNGNVQFGBH-INIZCTEOSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM595796; PubChem:CID169665671
Local ready
Direct docking supported
E3L029706
BDB029706
BDBM595797
Cc1cc2ncc([C@@H](C)N3CCN(c4ccc(C(=O)NC5CC5)nc4)CC3)cc2[nH]c1=O
C24H28N6O2
432.528000
KHEORNGNVQFGBH-MRXNPFEDSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM595797; PubChem:CID169665652
Local ready
Direct docking supported
E3L029707
BDB029707
BDBM595798
CCc1cc2ncc(CN3CCN(c4cccnc4C#N)CC3)cc2[nH]c1=O
C21H22N6O
374.448000
LVKRNKFWTYYZPN-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM595798; PubChem:CID166021891
Local ready
Direct docking supported
E3L029708
BDB029708
BDBM595799
Cc1cnc(N2CCN(Cc3cnc4cc(C5CC5)c(=O)[nH]c4c3)CC2)n1C
C21H26N6O
378.480000
HIMORBXERUDYHZ-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM595799; PubChem:CID166088946
Local ready
Direct docking supported
E3L029709
BDB029709
BDBM595801
CNC(=O)c1ccc(N2CCN(Cc3cnc4cc(Cl)c(=O)[nH]c4c3)CC2)cn1
C20H21ClN6O2
412.881000
PVYXHZJKOHRFLR-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM595801; PubChem:CID166021812
Local ready
Direct docking supported
E3L029710
BDB029710
BDBM595802
O=C(NC1CC1)c1ccc(N2CCN(Cc3cnc4c(c3)[nH]c(=O)c3ccoc34)CC2)cn1
C24H24N6O3
444.495000
FEUFMNKHMUNHIA-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM595802; PubChem:CID166089018
Local ready
Direct docking supported
E3L029711
BDB029711
BDBM595803
O=C(NC1CC1)c1ccc(N2CCN(Cc3cnc4cc(Cl)c(=O)[nH]c4c3)CC2)cn1
C22H23ClN6O2
438.919000
QZJDTOACGMGKHT-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM595803; PubChem:CID166088833
Local ready
Direct docking supported
E3L029712
BDB029712
7-Benzoyl-1,3,7-triazaspiro[4.4]nonane-2,4-dione
O=C1NC(=O)C2(CCN(C(=O)c3ccccc3)C2)N1
C13H13N3O3
259.265000
XBNLPFPGSKOCJV-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM600499; PubChem:CID78996098
Local ready
Direct docking supported
E3L029713
BDB029713
US11623929, Example 2
O=C1NC(=O)C2(CCN(C(=O)[C@H]3CCCc4ccccc43)C2)N1
C17H19N3O3
313.357000
UTYRVEGASOEMJK-CWQZNGJJSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM600500; PubChem:CID152067240
Local ready
Direct docking supported
E3L029714
BDB029714
US11623929, Example 3
O=C1NC(=O)C2(CCN(c3nc4ccccc4s3)C2)N1
C13H12N4O2S
288.332000
JDHXUMABFAVKIZ-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM600501; PubChem:CID148034884
Local ready
Direct docking supported
E3L029715
BDB029715
US11623929, Example 4
O=C1NC(=O)C2(CCN(C(=O)c3cnn4ccccc34)C2)N1
C14H13N5O3
299.290000
HPNZWSHWKWGFMA-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM600502; PubChem:CID150459791
Local ready
Direct docking supported
E3L029716
BDB029716
US11623929, Example 5
COC(=O)c1ccc(N2CCC3(C2)NC(=O)NC3=O)nc1
C13H14N4O4
290.279000
ULZLXWZUEUPEEK-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM600503; PubChem:CID152027395
Local ready
Direct docking supported
E3L029717
BDB029717
US11623929, Example 6
CC(=O)Nc1cccc(N2CCC3(C2)NC(=O)NC3=O)c1
C14H16N4O3
288.307000
XOHXSACDCDVFJU-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM600504; PubChem:CID156142290
Local ready
Direct docking supported
E3L029718
BDB029718
US11623929, Example 7
CC(=O)Nc1ccc(N2CCC3(C2)NC(=O)NC3=O)cc1
C14H16N4O3
288.307000
RKBFQYVTOFQJFJ-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM600505; PubChem:CID156142590
Local ready
Direct docking supported
E3L029719
BDB029719
US11623929, Example 8
O=C1NC(=O)C2(CCN(c3nc4ncccc4s3)C2)N1
C12H11N5O2S
289.320000
DGVCXMYHBXQNBX-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM600506; PubChem:CID150028881
Local ready
Direct docking supported
E3L029720
BDB029720
US11623929, Example 9
O=C1NC(=O)C2(CCN(C(=O)c3ccc4scnc4c3)C2)N1
C14H12N4O3S
316.342000
RCRVGNCDVAROTP-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM600507; PubChem:CID151691710
Local ready
Direct docking supported