E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L030601
BDB030601
US20230271937, Example F2-07
CN(Cc1cccc(OC(F)(F)F)c1)c1ncnc(NC[C@H]2CCN(CC(N)=O)C[C@@H]2O)c1F
C21H26F4N6O3
486.470000
STVBITGZDWPRME-ZBFHGGJFSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM614961; PubChem:CID156496987
Local ready
Direct docking supported
E3L030602
BDB030602
US20230271937, Example F2-08
CN(Cc1cccc(C#N)c1)c1ncnc(NC[C@H]2CCN(CC(N)=O)C[C@@H]2O)c1F
C21H26FN7O2
427.484000
XJBITQJVNPJAJC-SJORKVTESA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM614962; PubChem:CID156497056
Local ready
Direct docking supported
E3L030603
BDB030603
BDBM615628
CC(n1cnc(C(=O)N2C[C@@H]3[C@H](C2)[C@H]3C2=NOC(C)(C)C2)c1)C(F)(F)F
C17H21F3N4O2
370.375000
TUZBNSGQDAGILF-SBHLVVLUSA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM615628
Local ready
Direct docking supported
E3L030604
BDB030604
BDBM615630
C[C@@H](c1ccccc1C#N)n1cnc(C(=O)N2C[C@@H]3[C@H](C2)[C@H]3C2=NOC(C)(C)C2)c1
C23H25N5O2
403.486000
ZWKRPZNMZJSQNE-MUMXORNYSA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM615630
Local ready
Direct docking supported
E3L030605
BDB030605
BDBM615631
C[C@@H](c1ccc(C#N)cc1)n1cnc(C(=O)N2C[C@@H]3[C@H](C2)[C@H]3C2=NOC(C)(C)C2)c1
C23H25N5O2
403.486000
UOFGVWKZSHBPSS-MUMXORNYSA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM615631
Local ready
Direct docking supported
E3L030606
BDB030606
BDBM615632
C[C@@H](c1nccs1)n1cnc(C(=O)N2C[C@@H]3[C@H](C2)[C@H]3C2=NOC(C)(C)C2)c1
C19H23N5O2S
385.493000
ZZGPMRWAHXMYPY-BCUIYNNISA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM615632
Local ready
Direct docking supported
E3L030607
BDB030607
BDBM615634
CC(C)n1cnc(C(=O)N2C[C@@H]3[C@H](C2)[C@H]3C2=NOC(C)(C(F)F)C2)c1
C17H22F2N4O2
352.385000
MHYJPOVWHJXQEI-JLRAQOTISA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM615634
Local ready
Direct docking supported
E3L030608
BDB030608
BDBM615636
Cc1onc([C@H]2[C@@H]3CN(C(=O)c4cn(C(C)C)cn4)C[C@@H]32)c1-c1ccccc1
C22H24N4O2
376.460000
AROZBFWMXNVTLN-YRWFTTLQSA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM615636
Local ready
Direct docking supported
E3L030609
BDB030609
BDBM615637
Cc1cc([C@H]2[C@@H]3CN(C(=O)c4cn(C(C)C)cn4)C[C@@H]32)no1
C16H20N4O2
300.362000
BQTJLFOVNLUPFY-JYAVWHMHSA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM615637
Local ready
Direct docking supported
E3L030610
BDB030610
BDBM615638
CC(C)n1cnc(C(=O)N2C[C@@H]3[C@H](C2)[C@H]3C2=NOC(C)(C)N2C)c1
C17H25N5O2
331.420000
KPTGVIIQAARMAH-IMRBUKKESA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM615638
Local ready
Direct docking supported
E3L030611
BDB030611
BDBM615639
CCN1C([C@H]2[C@@H]3CN(C(=O)c4cn(C(C)C)cn4)C[C@@H]32)=NOC1(C)C
C18H27N5O2
345.447000
ZUUAPHURZXOPCR-NHAGDIPZSA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM615639
Local ready
Direct docking supported
E3L030612
BDB030612
BDBM615640
CC(C)n1cnc(C(=O)N2C[C@@H]3[C@H](C2)[C@H]3c2nnn3ccccc23)c1
C18H20N6O
336.399000
RIQDTFFFDKPBAU-VIKVFOODSA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM615640
Local ready
Direct docking supported
E3L030613
BDB030613
BDBM615641
CC(C)n1cnc(C(=O)N2C[C@@H]3[C@H](C2)[C@H]3c2nnn[nH]2)c1
C13H17N7O
287.327000
OKUPWWPBALOJLU-JZYVYDRUSA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM615641
Local ready
Direct docking supported
E3L030614
BDB030614
BDBM615642
CC(C)n1cnc(C(=O)N2C[C@@H]3[C@H](C2)[C@H]3C(=O)NC(C)(C)C)c1
C17H26N4O2
318.421000
RQJBMICURYTJKH-IMRBUKKESA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM615642
Local ready
Direct docking supported
E3L030615
BDB030615
BDBM615643
CC(C)n1cnc(C(=O)N2C[C@@H]3[C@H](C2)[C@H]3C(=O)N(C)C(C)(C)C)c1
C18H28N4O2
332.448000
TWUJMWMDAWIMJX-NHAGDIPZSA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM615643
Local ready
Direct docking supported
E3L030616
BDB030616
BDBM615644
CC(C)n1cnc(C(=O)N2C[C@@H]3[C@H](C2)[C@H]3C(=O)N(C)C2(C#N)CC2)c1
C18H23N5O2
341.415000
MMCRJAJVHRPWET-NHAGDIPZSA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM615644
Local ready
Direct docking supported
E3L030617
BDB030617
BDBM615645
CC(C)n1cnc(C(=O)N2C[C@@H]3[C@H](C2)[C@H]3C(=O)C2CC2)c1
C16H21N3O2
287.363000
YJQZYYAHVBHGEK-IMRBUKKESA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM615645
Local ready
Direct docking supported
E3L030618
BDB030618
BDBM615646
CC(C)n1cnc(C(=O)N2C[C@@H]3[C@H](C2)[C@H]3C(=O)c2cccs2)c1
C17H19N3O2S
329.425000
MNSOWDMDYJFSLD-JYAVWHMHSA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM615646
Local ready
Direct docking supported
E3L030619
BDB030619
BDBM615647
Cc1csc(C(=O)[C@H]2[C@@H]3CN(C(=O)c4cn(C(C)C)cn4)C[C@@H]32)c1
C18H21N3O2S
343.452000
DLTHNYYLLLWXSS-VIKVFOODSA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM615647
Local ready
Direct docking supported
E3L030620
BDB030620
BDBM615650
CC(C)n1cnc(C(=O)N2C[C@@H]3[C@H](C2)[C@@]3(C)C2=NOC3(CC3)C2)c1
C18H24N4O2
328.416000
VRLZGEARFQFGTC-LAQFHYBYSA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM615650
Local ready
Direct docking supported