E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L030641
BDB030641
BDBM616158
C[C@@]1(N2C(=O)c3ccc(-c4cn[nH]c4)c(O)c3C2=O)CCC(=O)NC1=O
C17H14N4O5
354.322000
XOVHLCMNLVDHDY-QGZVFWFLSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM616158; PubChem:CID168678878
Local ready
Direct docking supported
E3L030642
BDB030642
BDBM616159
C[C@@]1(N2C(=O)c3ccc(-c4n[nH]c(=S)o4)cc3C2=O)CCC(=O)NC1=O
C16H12N4O5S
372.362000
KKCJHXASUNDBBB-MRXNPFEDSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM616159; PubChem:CID166923667
Local ready
Direct docking supported
E3L030643
BDB030643
BDBM617497
CCOCCNC(=O)c1cn(-c2ccc(N3CCN(C)CC3)c(NC(=O)c3cc(N)c(F)c(C)c3Cl)c2)nn1
C26H32ClFN8O3
559.046000
REHHHTOKJZATST-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617497; PubChem:CID168679361
Local ready
Direct docking supported
E3L030644
BDB030644
BDBM617499
Cc1c(F)c(N)cc(C(=O)Nc2cc(-n3cc(C(=O)OCC(C)C)nn3)ccc2N2CCN(C)CC2)c1Cl
C26H31ClFN7O3
544.031000
KNEDNWWENFKPAP-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617499; PubChem:CID168679362
Local ready
Direct docking supported
E3L030645
BDB030645
BDBM617500
COc1ccc(COC(=O)c2cn(-c3ccc(N4CCN(C)CC4)c(NC(=O)c4cc(N)c(F)c(C)c4Cl)c3)nn2)cc1
C30H31ClFN7O4
608.074000
GVGMUATUZBRLRG-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617500; PubChem:CID168679363
Local ready
Direct docking supported
E3L030646
BDB030646
BDBM617501
CCOC(=O)[C@H](C)OC(=O)c1cn(-c2ccc(N3CCN(C)CC3)c(NC(=O)c3cc(N)c(F)c(C)c3Cl)c2)nn1
C27H31ClFN7O5
588.040000
IKHOOIKPMQABIP-INIZCTEOSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617501; PubChem:CID168679364
Local ready
Direct docking supported
E3L030647
BDB030647
BDBM617502
Cc1c(F)c(N)cc(C(=O)Nc2cc(-n3cc(C(=O)OCC4CCN(C)CC4)nn3)ccc2N2CCN(C)CC2)c1Cl
C29H36ClFN8O3
599.111000
AFJRDNSAKZLHBR-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617502; PubChem:CID168679365
Local ready
Direct docking supported
E3L030648
BDB030648
BDBM617503
Cc1c(F)c(N)cc(C(=O)Nc2cc(-n3cc(C(=O)OC4(C)CCC4)nn3)ccc2N2CCN(C)CC2)c1Cl
C27H31ClFN7O3
556.042000
QDWBYCATEVKFKW-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617503; PubChem:CID168679366
Local ready
Direct docking supported
E3L030649
BDB030649
BDBM617504
Cc1c(F)c(N)cc(C(=O)Nc2cc(-n3cc(C(=O)N(C)CCCN4CCOCC4)nn3)ccc2N2CCN(C)CC2)c1Cl
C30H39ClFN9O3
628.153000
YCPAGPQPPBYPRM-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617504; PubChem:CID168679367
Local ready
Direct docking supported
E3L030650
BDB030650
BDBM617505
Cc1c(F)c(N)cc(C(=O)Nc2cc(-n3cc(C(=O)N(C)CCCO)nn3)ccc2N2CCN(C)CC2)c1Cl
C26H32ClFN8O3
559.046000
NVQJLTSQEVEEFB-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617505; PubChem:CID168679368
Local ready
Direct docking supported
E3L030651
BDB030651
BDBM617506
Cc1c(F)c(N)cc(C(=O)Nc2cc(-n3cc(C(=O)NCCCN4CCOCC4)nn3)ccc2N2CCN(C)[C@@H](C)C2)c1Cl
C30H39ClFN9O3
628.153000
JBTAIVIQFXLQAZ-IBGZPJMESA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617506; PubChem:CID168679369
Local ready
Direct docking supported
E3L030652
BDB030652
BDBM617507
Cc1c(F)c(N)cc(C(=O)Nc2cc(-n3cc(C(=O)NCCCN4CCOCC4)nn3)ccc2N2C[C@@H](C)N(C)[C@@H](C)C2)c1Cl
C31H41ClFN9O3
642.180000
CMLDZCJREJRMKH-BGYRXZFFSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617507; PubChem:CID168679370
Local ready
Direct docking supported
E3L030653
BDB030653
BDBM617508
Cc1c(F)c(N)cc(C(=O)Nc2cc(-n3cc(C(=O)NCCCN4CCOCC4)nn3)ccc2N2CCCN(C)CC2)c1Cl
C30H39ClFN9O3
628.153000
PWONDNKTEMAKIH-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617508; PubChem:CID168679371
Local ready
Direct docking supported
E3L030654
BDB030654
BDBM617509
Cc1c(F)c(N)cc(C(=O)Nc2cc(-n3cc(C(=O)NCCCN4CCOCC4)nn3)c(F)cc2N2CCN(C)CC2)c1Cl
C29H36ClF2N9O3
632.116000
XBKPKIVPLBRZDY-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617509; PubChem:CID168679372
Local ready
Direct docking supported
E3L030655
BDB030655
BDBM617510
Cc1c(F)c(N)cc(C(=O)Nc2cc(-n3cc(C(=O)NCCCN4CCOCC4)nn3)c(F)cc2N2CCN(C)C(C)C2)c1Cl
C30H38ClF2N9O3
646.143000
ZUBYPCMPEPERAP-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617510; PubChem:CID168679373
Local ready
Direct docking supported
E3L030656
BDB030656
BDBM617511
Cc1c(F)c(N)cc(C(=O)Nc2cc(-n3cc(C(=O)NCCCN4CCOCC4)nn3)c(F)cc2N2C[C@@H](C)N(C)[C@@H](C)C2)c1Cl
C31H40ClF2N9O3
660.170000
ZROURIKNNSVHHY-KDURUIRLSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM617511
Local ready
Direct docking supported
E3L030657
BDB030657
BDBM617512
Cc1cc(C(=O)Nc2cc(-n3cc(C(=O)NCCCN4CCOCC4)nn3)ccc2N2CCN(C)CC2)cc(C)c1F
C30H39FN8O3
578.693000
FQPXCEBOYUXFIF-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617512; PubChem:CID168679375
Local ready
Direct docking supported
E3L030658
BDB030658
BDBM617513
Cc1c(F)ccc(C(=O)Nc2cc(-n3cc(C(=O)NCCCN4CCOCC4)nn3)ccc2N2CCN(C)CC2)c1Cl
C29H36ClFN8O3
599.111000
XKDJGACSCJUVMA-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617513; PubChem:CID168679376
Local ready
Direct docking supported
E3L030659
BDB030659
BDBM617514
Cc1c(F)c([N+](=O)[O-])cc(C(=O)Nc2cc(-n3cc(C(=O)NCCCN4CCOCC4)nn3)ccc2N2CCN(C)CC2)c1Cl
C29H35ClFN9O5
644.108000
KRGMEIIAIQMQHM-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617514; PubChem:CID168679377
Local ready
Direct docking supported
E3L030660
BDB030660
BDBM617515
CN1CCN(c2ccc(-n3cc(C(=O)NCCCN4CCOCC4)nn3)cc2NC(=O)c2ccc(F)c([N+](=O)[O-])c2)CC1
C28H34FN9O5
595.636000
FPMWOTFQXYPDSV-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617515; PubChem:CID168679378
Local ready
Direct docking supported