E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L033521
BDB033521
BDBM661051
Cn1cc(-c2ccc(CNc3ccc(F)c(NC(=O)CCc4ccsc4)c3)cc2)cn1
C24H23FN4OS
434.540000
ZCJHEWGVKGGCNZ-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM661051; PubChem:CID163286455
Local ready
Direct docking supported
E3L033522
BDB033522
BDBM661052
Cn1cc(-c2ccc(CNc3ccc(F)c(NC(=O)/C=C/c4ccco4)c3)cc2)cn1
C24H21FN4O2
416.456000
LPBCGQKTMKAFNE-PKNBQFBNSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM661052; PubChem:CID163286491
Local ready
Direct docking supported
E3L033523
BDB033523
BDBM661053
Cn1cc(-c2ccc(CNc3ccc(F)c(NC(=O)C=Cc4ccccc4)c3)cc2)cn1
C26H23FN4O
426.495000
CYXAMOMUWHZSKV-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM661053; PubChem:CID171665284
Local ready
Direct docking supported
E3L033524
BDB033524
PROTAC BTK Degrader-10
Cc1cc(-c2cc(Nc3ccc(N4CCN(CCc5ccc(N6CCC(=O)NC6=O)cc5)C[C@@H]4C)cn3)ncn2)ccc1[C@@H](C)NC(=O)c1nc(C(C)(C)C)no1
C42H49N11O4
771.927000
IFISVDOJTJUTBK-WUFINQPMSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM662947; PubChem:CID169081326
Local ready
Direct docking supported
E3L033525
BDB033525
US12172992, Example 2
Cc1cc(-c2cc(Nc3ccc(N4CCN(CCc5ccc(N6CCC(=O)NC6=O)cc5)C[C@H]4C)cn3)ncn2)ccc1[C@@H](C)NC(=O)c1nc(C(C)(C)C)no1
C42H49N11O4
771.927000
IFISVDOJTJUTBK-VSGBNLITSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM662948; PubChem:CID169081263
Local ready
Direct docking supported
E3L033526
BDB033526
US12172992, Example 3
Cc1cc(-c2cc(Nc3ccc(N4CCN(CCc5ccc(N6CCC(=O)NC6=O)cc5)CC4)cn3)ncn2)ccc1[C@@H](C)NC(=O)c1nc(C(C)(C)C)no1
C41H47N11O4
757.900000
XTTYHHPEDDXLEH-HHHXNRCGSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM662949; PubChem:CID169081264
Local ready
Direct docking supported
E3L033527
BDB033527
US12172992, Example 4
Cc1cc(-c2cc(Nc3ccc(N4CCN(CCc5ccc(N6CCC(=O)NC6=O)c(F)c5)C[C@@H]4C)cn3)ncn2)ccc1[C@@H](C)NC(=O)c1nc(C(C)(C)C)no1
C42H48FN11O4
789.917000
XZWLTIJDAOOAOZ-RRPNLBNLSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM662950; PubChem:CID169081285
Local ready
Direct docking supported
E3L033528
BDB033528
US12172992, Example 5
Cc1cc(-c2cc(Nc3ccc(N4CCN(CCc5ccc(N6CCC(=O)NC6=O)c(F)c5)C[C@H]4C)cn3)ncn2)ccc1[C@@H](C)NC(=O)c1nc(C(C)(C)C)no1
C42H48FN11O4
789.917000
XZWLTIJDAOOAOZ-KAYWLYCHSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM662951; PubChem:CID169081270
Local ready
Direct docking supported
E3L033529
BDB033529
US12172992, Example 6
CC[C@H]1CN(CCc2ccc(N3CCC(=O)NC3=O)cc2)CCN1c1ccc(Nc2cc(-c3ccc([C@@H](C)NC(=O)c4nc(C(C)(C)C)no4)c(C)c3)ncn2)nc1
C43H51N11O4
785.954000
HJKHARHYGJCYLQ-MVSFAKPFSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM662952; PubChem:CID169081318
Local ready
Direct docking supported
E3L033530
BDB033530
US12172992, Example 7
CC[C@H]1CN(CCc2ccc(N3CCC(=O)NC3=O)c(F)c2)CCN1c1ccc(Nc2cc(-c3ccc([C@@H](C)NC(=O)c4nc(C(C)(C)C)no4)c(C)c3)ncn2)nc1
C43H50FN11O4
803.944000
ZXUCGFSMGYJNRI-OFSOJUDTSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM662953; PubChem:CID169081340
Local ready
Direct docking supported
E3L033531
BDB033531
US12172992, Example 8
CC[C@@H]1CN(CCc2ccc(N3CCC(=O)NC3=O)cc2)CCN1c1ccc(Nc2cc(-c3ccc([C@@H](C)NC(=O)c4nc(C(C)(C)C)no4)c(C)c3)ncn2)nc1
C43H51N11O4
785.954000
HJKHARHYGJCYLQ-GRKNLSHJSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM662954; PubChem:CID169081311
Local ready
Direct docking supported
E3L033532
BDB033532
US12172992, Example 9
Cc1cc(-c2cc(Nc3ccc(N4CCN(CCc5ccc(N6CCC(=O)NC6=O)cc5)CC4(C)C)cn3)ncn2)ccc1[C@@H](C)NC(=O)c1nc(C(C)(C)C)no1
C43H51N11O4
785.954000
FFERLSHFMZMHLG-MUUNZHRXSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM662955; PubChem:CID169081338
Local ready
Direct docking supported
E3L033533
BDB033533
US12172992, Example 10
Cc1c([C@@H](C)NC(=O)c2nc(C(C)(C)C)no2)ccc(-c2cc(Nc3ccc(N4CCN(CCc5ccc(N6CCC(=O)NC6=O)cc5)C[C@@H]4C)cn3)ncn2)c1F
C42H48FN11O4
789.917000
HKJLLZRGVOIGSI-AHKZPQOWSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM662956; PubChem:CID169081341
Local ready
Direct docking supported
E3L033534
BDB033534
US12172992, Example 11
Cc1c([C@@H](C)NC(=O)c2nc(C(C)(C)C)no2)ccc(-c2cc(Nc3ccc(N4CCN(CCc5ccc(N6CCC(=O)NC6=O)cc5)CC4)cn3)ncn2)c1F
C41H46FN11O4
775.890000
DXAMCKURBGAPRL-AREMUKBSSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM662957; PubChem:CID169081291
Local ready
Direct docking supported
E3L033535
BDB033535
US12172992, Example 12
Cc1cc(-c2cc(Nc3ccc(N4CCN(CCc5ccc(N6CCC(=O)NC6=O)cc5)CC4)cn3)ncn2)c(F)cc1[C@@H](C)NC(=O)c1nc(C(C)(C)C)no1
C41H46FN11O4
775.890000
VCYKHFWTVADJIM-AREMUKBSSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM662958; PubChem:CID169081330
Local ready
Direct docking supported
E3L033536
BDB033536
US12172992, Example 13
Cc1cc(-c2cc(Nc3ccc(N4CCN(CCc5ccc(N6CCC(=O)NC6=O)cc5)C[C@@H]4C(C)C)cn3)ncn2)ccc1[C@@H](C)NC(=O)c1nc(C(C)(C)C)no1
C44H53N11O4
799.981000
FJLQPZAPFKXILN-JQMWFGOGSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM662959; PubChem:CID169081271
Local ready
Direct docking supported
E3L033537
BDB033537
US12172992, Example 14
C[C@@H](NC(=O)c1nc(C(C)(C)C)no1)c1ccc(-c2cc(Nc3ccc(N4CCN(CCc5ccc(N6CCC(=O)NC6=O)cc5)C[C@@H]4C)cn3)ncn2)cc1Cl
C41H46ClN11O4
792.345000
DQWWVCQXTSHOSR-IZZNHLLZSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM662960; PubChem:CID169081333
Local ready
Direct docking supported
E3L033538
BDB033538
US12172992, Example 15
COC[C@H]1CN(CCc2ccc(N3CCC(=O)NC3=O)cc2)CCN1c1ccc(Nc2cc(-c3ccc([C@@H](C)NC(=O)c4nc(C(C)(C)C)no4)c(C)c3)ncn2)nc1
C43H51N11O5
801.953000
HWIOHEPNEVRULC-LHXZUMEBSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM662961; PubChem:CID169081308
Local ready
Direct docking supported
E3L033539
BDB033539
US12172992, Example 16
C[C@@H](NC(=O)c1nc(C(C)(C)C)no1)c1ccc(-c2cc(Nc3ccc(N4CCN(CCc5ccc(N6CCC(=O)NC6=O)cc5)C[C@@H]4C)cn3)ncn2)cc1C(F)(F)F
C42H46F3N11O4
825.897000
FBCKBVQQCMIWBW-IZZNHLLZSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM662962; PubChem:CID169081282
Local ready
Direct docking supported
E3L033540
BDB033540
US12172992, Example 17
C[C@@H](NC(=O)c1nc(C(C)(C)C)no1)c1ccc(-c2cc(Nc3ccc(N4CCN(CCc5ccc(N6CCC(=O)NC6=O)cc5)C[C@@H]4C)cn3)ncn2)cc1F
C41H46FN11O4
775.890000
WCKXKIOIVQPJQO-IZZNHLLZSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM662963; PubChem:CID169081268
Local ready
Direct docking supported