E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L034761
BDB034761
US12110286, Example 25i
Cn1c(=O)n(C[C@@H]2CCCN2CC(F)F)c2cc(Nc3ccnc(Cl)c3C#N)ccc21
C21H21ClF2N6O
446.889000
BSUICAJGEIGTFO-AWEZNQCLSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699611; PubChem:CID135386978
Local ready
Direct docking supported
E3L034762
BDB034762
BDBM699612
CCNC(C)CCn1c(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc21
C20H23ClN6O
398.898000
REGMEWNXYKVGSU-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699612; PubChem:CID135386145
Local ready
Direct docking supported
E3L034763
BDB034763
US12110286, Example 27a
C#CCC(C)(O)CCn1c(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc21
C21H20ClN5O2
409.877000
IXEHRLZPZXODLV-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699613; PubChem:CID135386891
Local ready
Direct docking supported
E3L034764
BDB034764
US12110286, Example 27b
COCC(C)(O)CCn1c(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc21
C20H22ClN5O3
415.881000
DFRXXALHXBTAIA-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699614; PubChem:CID135386365
Local ready
Direct docking supported
E3L034765
BDB034765
US12110286, Example 27c
CCC(C)(O)CCn1c(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc21
C20H22ClN5O2
399.882000
JPLDIOHUXNKFSE-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699615; PubChem:CID135386872
Local ready
Direct docking supported
E3L034766
BDB034766
US12110286, Example 27d
Cn1c(=O)n(CCC(C)(O)C(F)(F)F)c2cc(Nc3ccnc(Cl)c3C#N)ccc21
C19H17ClF3N5O2
439.825000
UICUEJFNUJVFSL-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699616; PubChem:CID135386893
Local ready
Direct docking supported
E3L034767
BDB034767
US12110286, Example 27e
CC(Cn1c(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc21)C(C)(C)O
C20H22ClN5O2
399.882000
DQTZJZHORYSBKG-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699617; PubChem:CID135386950
Local ready
Direct docking supported
E3L034768
BDB034768
US12110286, Example 27f
CC(C)C(C)(O)CCn1c(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc21
C21H24ClN5O2
413.909000
VQJDGRQLOZDZRJ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699618; PubChem:CID135386709
Local ready
Direct docking supported
E3L034769
BDB034769
US12110286, Example 28b
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CCOC(C(F)(F)F)C4)ncc3Cl)ccc21
C22H26ClF3N6O3
514.936000
KNPCUOOELJZASC-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699620; PubChem:CID135386368
Local ready
Direct docking supported
E3L034770
BDB034770
US12110286, Example 29a
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3ccnc(F)c3Cl)ccc21
C18H20ClFN4O2
378.835000
IRUWPFLSHZBUCT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699621; PubChem:CID135386062
Local ready
Direct docking supported
E3L034771
BDB034771
US12110286, Example 29c
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3ccncc3Br)ccc21
C18H21BrN4O2
405.296000
JYOAYPGPUZOJMH-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699623; PubChem:CID135386364
Local ready
Direct docking supported
E3L034772
BDB034772
US12110286, Example 29d
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3cc(C(F)(F)F)ncc3Cl)ccc21
C19H20ClF3N4O2
428.842000
ULWISBGXOIEZEJ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699624; PubChem:CID135386890
Local ready
Direct docking supported
E3L034773
BDB034773
US12110286, Example 30b
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CCCC4=O)ncc3Cl)ccc21
C21H25ClN6O3
444.923000
ARMKWDQGWWHLQX-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699627; PubChem:CID135386047
Local ready
Direct docking supported
E3L034774
BDB034774
US12110286, Example 31a
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CCC[C@H]4CO)ncc3Cl)ccc21
C22H29ClN6O3
460.966000
DFYGHDDQTFKQIM-HNNXBMFYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699628; PubChem:CID135386701
Local ready
Direct docking supported
E3L034775
BDB034775
US12110286, Example 31b
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3cc(N4CCC[C@H]4CO)nc4c(C#N)cnn34)ccc21
C25H30N8O3
490.568000
HPAXMRQJWOKPFE-SFHVURJKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699629; PubChem:CID135386706
Local ready
Direct docking supported
E3L034776
BDB034776
US12110286, Example 32
Cn1c(=O)n(CCC2(C)CO2)c2cc(Nc3ccnc(Cl)c3C#N)ccc21
C19H18ClN5O2
383.839000
CKUSXBFYMCMBEX-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699630; PubChem:CID135386902
Local ready
Direct docking supported
E3L034777
BDB034777
US12110286, Example 33
CN1CC(C)(CCn2c(=O)n(C)c3ccc(Nc4ccnc(Cl)c4C#N)cc32)OC1=O
C21H21ClN6O3
440.891000
NTAQGMFUQGSJQV-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699631; PubChem:CID135386335
Local ready
Direct docking supported
E3L034778
BDB034778
US12110286, Example 34
CC1OC(=O)NC1Cn1c(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc21
C19H17ClN6O3
412.837000
CWZDQUQAPYETDT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699632; PubChem:CID135386085
Local ready
Direct docking supported
E3L034779
BDB034779
US12110286, Example 35f
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CCC5(CC4)CC(F)(F)C5)ncc3Cl)ccc21
C25H31ClF2N6O2
521.012000
SBBIIMVLQYCQDN-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699638; PubChem:CID135386931
Local ready
Direct docking supported
E3L034780
BDB034780
US12110286, Example 35h
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4C[C@@H](F)[C@@H](F)C4)ncc3Cl)ccc21
C21H25ClF2N6O2
466.920000
TXGGUXCZSTXWQD-GASCZTMLSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699640; PubChem:CID135386195
Local ready
Direct docking supported