E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L034781
BDB034781
US12110286, Example 35i
Cn1c(=O)n(C[C@@H]2CCCN2CC(F)(F)F)c2cc(Nc3nc(N4CC(C)(C)OC(C)(C)C4)ncc3Cl)ccc21
C27H35ClF3N7O2
582.071000
ARHFCDBLHOPVOE-SFHVURJKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699641; PubChem:CID142478632
Local ready
Direct docking supported
E3L034782
BDB034782
US12110286, Example 35j
C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4CCC(C)(C)O)n2)C[C@H](C)C1C(F)(F)F
C29H40ClF3N6O3
613.125000
NAAZKONADSVXCK-NHJWOMDBSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699642; PubChem:CID156379044
Local ready
Direct docking supported
E3L034783
BDB034783
US12110286, Example 35k
CC(C)(O)CCn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CC(C)(C)OC(C)(C)C4)ncc3Cl)ccc21
C29H43ClN6O4
575.154000
LMAIOMLBVIYMHM-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699643; PubChem:CID135386588
Local ready
Direct docking supported
E3L034784
BDB034784
US12110286, Example 35m
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4C5CCCC4CC5)ncc3Cl)ccc21
C24H31ClN6O2
471.005000
YGQUSWUMVLBBKC-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699645; PubChem:CID156379049
Local ready
Direct docking supported
E3L034785
BDB034785
US12110286, Example 35n
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CC5CCC(C5)C4)ncc3Cl)ccc21
C24H31ClN6O2
471.005000
IQKNIVKBXFLNBM-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699646; PubChem:CID142478664
Local ready
Direct docking supported
E3L034786
BDB034786
US12110286, Example 35o
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4C[C@H]5CCCC[C@H]5C4)ncc3Cl)ccc21
C25H33ClN6O2
485.032000
ZRQDQRIMPUKQKZ-CALCHBBNSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699647; PubChem:CID152701295
Local ready
Direct docking supported
E3L034787
BDB034787
US12110286, Example 35p
C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)n2)C[C@@H]1C
C23H31ClN6O2
458.994000
NOZFVRCUVMGYER-GASCZTMLSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699648; PubChem:CID135386040
Local ready
Direct docking supported
E3L034788
BDB034788
US12110286, Example 35q
CC(C)(O)CCn1c(=O)n(CCC(C)(C)O)c2ncc(Nc3nc(N4CC(C)(C)OC(C)(C)C4)ncc3Cl)cc21
C28H42ClN7O4
576.142000
LQXXJHVEAZYUOX-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699649; PubChem:CID135386905
Local ready
Direct docking supported
E3L034789
BDB034789
US12110286, Example 35r
C[C@@H]1CN(c2ncc(Cl)c(Nc3cnc4c(c3)n(CCC(C)(C)O)c(=O)n4CCC(C)(C)O)n2)C[C@H](C)C1(F)F
C27H38ClF2N7O3
582.096000
UNFFWXKRLZFVAI-CALCHBBNSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699650; PubChem:CID142478671
Local ready
Direct docking supported
E3L034790
BDB034790
US12110286, Example 35t
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4C5CC6CC(C5)CC4C6)ncc3Cl)ccc21
C26H33ClN6O2
497.043000
GTNYDXMFCJPIJT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699652; PubChem:CID135386889
Local ready
Direct docking supported
E3L034791
BDB034791
US12110286, Example 35u
CC(C)(O)CCn1c(=O)n(CCC(C)(C)O)c2c(Cl)cc(Nc3nc(N4CC(C)(C)OC(C)(C)C4)ncc3Cl)cc21
C29H42Cl2N6O4
609.599000
BWZVZRVOMNBKCL-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699653; PubChem:CID135386877
Local ready
Direct docking supported
E3L034792
BDB034792
US12110286, Example 35v
COCC1CCCN(c2ncc(Cl)c(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)n2)C1
C24H33ClN6O3
489.020000
GJVZEHPBKVKLMH-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699654; PubChem:CID135386750
Local ready
Direct docking supported
E3L034793
BDB034793
US12110286, Example 35w
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CC5CC(C4)C5(F)F)ncc3Cl)ccc21
C23H27ClF2N6O2
492.958000
DFQHKNJMOLAZMY-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699655; PubChem:CID135386954
Local ready
Direct docking supported
E3L034794
BDB034794
US12110286, Example 35x
C[C@@H]1C[C@H](O)CN(c2ncc(Cl)c(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)n2)C1
C23H31ClN6O3
474.993000
QKIKTQLOBNLUOX-ZBFHGGJFSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699656; PubChem:CID142478696
Local ready
Direct docking supported
E3L034795
BDB034795
US12110286, Example 35y
C[C@@H]1CCN(c2ncc(Cl)c(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)n2)C[C@H](C)C1
C25H35ClN6O2
487.048000
NWFLACPUZRTKSC-IAGOWNOFSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699657; PubChem:CID142478610
Local ready
Direct docking supported
E3L034796
BDB034796
US12110286, Example 35za
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CCCC(c5ccccc5)C4)ncc3Cl)ccc21
C28H33ClN6O2
521.065000
VDPYLQWSWOEJNL-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699658; PubChem:CID135386921
Local ready
Direct docking supported
E3L034797
BDB034797
US12110286, Example 35zb
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CCC(Cn5cccn5)CC4)ncc3Cl)ccc21
C26H33ClN8O2
525.057000
FJQFFTLAMDARHW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699659; PubChem:CID135386028
Local ready
Direct docking supported
E3L034798
BDB034798
US12110286, Example 36c
CN(C)C(=O)C1CCN(c2cc(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)c(Cl)cn2)CC1
C26H35ClN6O3
515.058000
JTGDVRDKVOVKOJ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699662; PubChem:CID135386740
Local ready
Direct docking supported
E3L034799
BDB034799
US12110286, Example 36e
C[C@@H]1C[C@H](C)CN(C(=O)c2cc(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)c(Cl)cn2)C1
C26H34ClN5O3
500.043000
VESKNZUWMISKIH-CALCHBBNSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699664; PubChem:CID135386751
Local ready
Direct docking supported
E3L034800
BDB034800
US12110286, Example 36f
C[C@@H]1CN(C(=O)c2cc(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)c(Cl)cn2)C[C@H](C)C1(F)F
C26H32ClF2N5O3
536.023000
CEGCVFJYIVHEMV-IYBDPMFKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699665; PubChem:CID135385847
Local ready
Direct docking supported