E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L035141
BDB035141
BDBM707218
CCC1CC2N=CC(CN3CCN(C4C=CC(NC(=O)[C@@H]5C[C@H]5F)=NC4)CC3)=CC2NC1=O
C24H33FN6O2
456.566000
KKGPBCZYXISFPB-JJXKEYSCSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM707218; PubChem:CID172991709
Local ready
Direct docking supported
E3L035142
BDB035142
BDBM707219
CCC1CC2N=CC(CN3CCN(C4C=CC(NC(=O)[C@H]5CCN(C)C5)=NC4)CC3)=CC2NC1=O
C26H39N7O2
481.645000
ASGXKILKCIZHAI-ZCGPYFMNSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM707219; PubChem:CID172991710
Local ready
Direct docking supported
E3L035143
BDB035143
BDBM707220
CCC1=CC2N=CC(CN3CCN(c4ccc(NC(=O)OC5CC5)nc4)CC3)CC2NC1=O
C24H32N6O3
452.559000
PWWAYUBHWQTUDO-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM707220; PubChem:CID172991711
Local ready
Direct docking supported
E3L035144
BDB035144
BDBM707221
CCC1CC2N=CC(CN3CCN(C4C=CC(C(=O)NC5CC6(CCC6)C5)=NC4)CC3)=CC2NC1=O
C28H40N6O2
492.668000
YKECUXUNJXXETH-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM707221; PubChem:CID172991712
Local ready
Direct docking supported
E3L035145
BDB035145
BDBM707222
CCC1=CC2N=CC(CN3CCN(c4ccc(C(=O)NC56CC(C5)C6)nc4)CC3)CC2NC1=O
C26H34N6O2
462.598000
PIFARTBLYHOZHR-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM707222; PubChem:CID172991713
Local ready
Direct docking supported
E3L035146
BDB035146
BDBM707223
CCC1=CC2N=CC(CN3CCN(c4ccc(C(=O)NCC5CC5)nc4)CC3)CC2NC1=O
C25H34N6O2
450.587000
CSXLAAVTIDOUDO-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM707223; PubChem:CID172991714
Local ready
Direct docking supported
E3L035147
BDB035147
BDBM707224
CCC1CC2N=CC(CN3CCN(C4C=CC(C(=O)N[C@H]5C[C@H]5F)=NC4)CC3)=CC2NC1=O
C24H33FN6O2
456.566000
KTBPNDIFJAIALD-QEPIYBIGSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM707224; PubChem:CID172991715
Local ready
Direct docking supported
E3L035148
BDB035148
BDBM707225
CCC1Cc2ncc(CN3CCN(C4C=NC(c5nnc(C)[nH]5)=CC4)CC3)cc2NC1=O
C23H30N8O
434.548000
MKDFARKKEYERTH-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM707225; PubChem:CID172991716
Local ready
Direct docking supported
E3L035149
BDB035149
BDBM707226
CCC1Cc2ncc(CN3CCN(C4CN5C=C(C(F)(F)F)NC5C=N4)CC3)cc2NC1=O
C22H28F3N7O
463.508000
BAEYOAPATISWSQ-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM707226; PubChem:CID172991717
Local ready
Direct docking supported
E3L035150
BDB035150
BDBM707227
CCC1=CN2CC(N3CCN(Cc4cnc5c(c4)NC(=O)C(CC)C5)CC3)N=CC2N1
C23H33N7O
423.565000
IMRVKURECLCRAC-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM707227; PubChem:CID172991718
Local ready
Direct docking supported
E3L035151
BDB035151
BDBM707228
CCC1=Cc2ncc(CN3CCN(c4cn5cc(C(F)F)nc5cn4)CC3)cc2CC1=O
C23H24F2N6O
438.482000
AFZLLXUFLZGRGB-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM707228; PubChem:CID172991719
Local ready
Direct docking supported
E3L035152
BDB035152
BDBM707229
CCC1CC2N=CC(CN3CCN(C4C=CC(C(=O)NC5CN(c6ccccc6)C5)=NC4)CC3)=CC2NC1=O
C30H39N7O2
529.689000
APXWJMRWWOYXCU-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM707229; PubChem:CID172991720
Local ready
Direct docking supported
E3L035153
BDB035153
BDBM707230
CCC1CC2N=CC(CN3CCN(C4C=CC(C(=O)Nc5ccn(C)n5)=NC4)CC3)=CC2NC1=O
C25H34N8O2
478.601000
MCHFSANMIHSFOP-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM707230; PubChem:CID172991721
Local ready
Direct docking supported
E3L035154
BDB035154
BDBM707231
CCC1CC2N=CC(CN3CCN(C4C=CC(NC(=O)[C@@H]5CC5(F)F)=NC4)CC3)=CC2NC1=O
C24H32F2N6O2
474.556000
IVIIBFXOIZKWGP-ALJDKOKLSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB
BindingDB:BDBM707231
Local ready
Direct docking supported
E3L035155
BDB035155
BDBM707232
CCC1CC2N=CC(CN3CCN(C4C=CC(NC(=O)[C@H]5CC5(F)F)=NC4)CC3)=CC2NC1=O
C24H32F2N6O2
474.556000
IVIIBFXOIZKWGP-YFHPXGLKSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB
BindingDB:BDBM707232
Local ready
Direct docking supported
E3L035156
BDB035156
US11091495, Example 228
Cc1cc(-c2cnc(NCc3c(F)ccc4c3CCO4)n3cc(C#N)nc23)n(C)n1
C21H18FN7O
403.421000
WUFADHRATSOXBZ-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM707233; PubChem:CID152324986
Local ready
Direct docking supported
E3L035157
BDB035157
US11091495, Example 184
Cc1cc(S(=O)(=O)C(F)(F)F)ccc1-c1cnc(NCc2c(F)ccc3c2CCO3)n2cc(C#N)nc12
C24H17F4N5O3S
531.491000
YAGRWOSMKWMLKY-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM707235; PubChem:CID156051050
Local ready
Direct docking supported
E3L035158
BDB035158
US11091495, Example 111
Cn1nc(C(F)(F)F)cc1-c1cnc(NCc2c(F)ccc3c2CCO3)n2cc(C#N)nc12
C21H15F4N7O
457.391000
KKQYWOJEQUGBDY-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM707236; PubChem:CID156050908
Local ready
Direct docking supported
E3L035159
BDB035159
US20240409538, Example 4
COc1ncnc(C2CC2)c1-c1nc2c(Cc3ccc(-c4nc(C(F)(F)F)cn4C(C)C)cc3)cccn2n1
C28H26F3N7O
533.558000
CINCXWDQAYFRSP-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM707411; PubChem:CID171782526
Local ready
Direct docking supported
E3L035160
BDB035160
US20240409538, Example 5
COc1ncnc(C2CC2)c1-c1nc2c(Cc3ccc(-c4nc(C(F)(F)F)cn4C)cc3)cccn2n1
C26H22F3N7O
505.504000
UZBZXDJYDCJZTL-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM707412; PubChem:CID171782523
Local ready
Direct docking supported