E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L036221
BDB036221
US20250082630, Example 50
CNC(=O)c1ccc(N2CCN(Cc3ccc4nc(C(F)(F)F)c(=O)[nH]c4c3F)CC2)cn1
C21H20F4N6O2
464.423000
DWAATVADJCSYHY-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726545; PubChem:CID162524602
Local ready
Direct docking supported
E3L036222
BDB036222
US20250082630, Example 51
CNC(=O)c1ccc(N2CCN(Cc3ccc4nc(C(C)C)c(=O)[nH]c4c3F)CC2)c(F)n1
C23H26F2N6O2
456.497000
MGZRBFSTQZBIRE-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726546; PubChem:CID162524569
Local ready
Direct docking supported
E3L036223
BDB036223
US20250082630, Example 52
CNC(=O)c1ccc(N2CCN(Cc3ccc4nc(C(C)C)c(=O)[nH]c4c3F)CC2)c(C)n1
C24H29FN6O2
452.534000
SUEUDWLKAKTAKH-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726547; PubChem:CID162524537
Local ready
Direct docking supported
E3L036224
BDB036224
US20250082630, Example 53
CNC(=O)c1ccc(N2CCN(Cc3ccc4nc(C(C)C)c(=O)[nH]c4c3F)CC2)cn1
C23H27FN6O2
438.507000
ITKLUVDKVKQKOD-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726548; PubChem:CID162524435
Local ready
Direct docking supported
E3L036225
BDB036225
US20250082630, Example 54
CNC(=O)c1ccc(N2CCN(Cc3ccc4nc(C5CC5)c(=O)[nH]c4c3F)CC2)c(F)n1
C23H24F2N6O2
454.481000
FYWGATBYUINRQB-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726549; PubChem:CID162524516
Local ready
Direct docking supported
E3L036226
BDB036226
US20250082630, Example 55
CNC(=O)c1ccc(N2CCN(Cc3ccc4nc(C5CC5)c(=O)[nH]c4c3F)CC2)c(C)n1
C24H27FN6O2
450.518000
HCXPOCOMUTVPPA-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726550; PubChem:CID162524439
Local ready
Direct docking supported
E3L036227
BDB036227
US20250082630, Example 56
CNC(=O)c1ccc(N2CCN(Cc3ccc4nc(C5CC5)c(=O)[nH]c4c3F)CC2)cn1
C23H25FN6O2
436.491000
ZRCBKRIJDLJFLT-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726551; PubChem:CID162524436
Local ready
Direct docking supported
E3L036228
BDB036228
US20250082630, Example 57
CNC(=O)c1ccc(N2CCN(Cc3ccc4nc(OC)c(=O)[nH]c4c3C)CC2)c(C)n1
C23H28N6O3
436.516000
RSPGYQYJMSJIAH-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726552; PubChem:CID162524560
Local ready
Direct docking supported
E3L036229
BDB036229
US20250082630, Example 58
CNC(=O)c1ccc(N2CCN(Cc3ccc4nc(OC)c(=O)[nH]c4c3C)CC2)c(F)n1
C22H25FN6O3
440.479000
ZLTNQLOPLKNGPU-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726553; PubChem:CID162524423
Local ready
Direct docking supported
E3L036230
BDB036230
US20250082630, Example 59
CNC(=O)c1ccc(N2CCN(Cc3ccc4nc(OC)c(=O)[nH]c4c3C)CC2)c(C(F)F)n1
C23H26F2N6O3
472.496000
OQIQIFDEZCRZTO-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726554; PubChem:CID162524442
Local ready
Direct docking supported
E3L036231
BDB036231
US20250082630, Example 60
CNC(=O)c1ccc(N2CCN(Cc3ccc4nc(C)c(=O)[nH]c4c3C)CC2)c(C(F)F)n1
C23H26F2N6O2
456.497000
NQZLWMVGVSQXCU-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726555; PubChem:CID162524446
Local ready
Direct docking supported
E3L036232
BDB036232
US12252493, Example 1
Cc1cc(-c2cnc(NCc3c(F)ccc4c3CCO4)n3cc(CO)nc23)n(C)n1
C21H21FN6O2
408.437000
MVVTWFGQXKRKAK-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM727043; PubChem:CID155369194
Local ready
Direct docking supported
E3L036233
BDB036233
US12252493, Example 2
Cc1cc(S(C)(=O)=O)ccc1-c1cnc(NCc2c(F)ccc3c2CCO3)n2cc(CO)nc12
C24H23FN4O4S
482.537000
DULHIKBIAKGJGD-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM727044; PubChem:CID155369227
Local ready
Direct docking supported
E3L036234
BDB036234
US12252493, Example 3
Cc1ncccc1-c1cnc(NCc2c(F)ccc3c2CCO3)n2cc(CO)nc12
C22H20FN5O2
405.433000
GPGNLADXCXTCLS-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM727045; PubChem:CID155382906
Local ready
Direct docking supported
E3L036235
BDB036235
US12252493, Example 4
OCc1cn2c(NCc3c(F)ccc4c3CCO4)ncc(-c3ccc(C4CC4)nc3)c2n1
C24H22FN5O2
431.471000
RCVIGXAPGWXYDY-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM727051; PubChem:CID155382905
Local ready
Direct docking supported
E3L036236
BDB036236
US12252493, Example 5
COc1ccc(-c2cnc(NCc3c(F)ccc4c3CCO4)n3cc(CO)nc23)c(C)n1
C23H22FN5O3
435.459000
SJKPDBHMQXAFBX-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM727052; PubChem:CID155383079
Local ready
Direct docking supported
E3L036237
BDB036237
US12252493, Example 6
Cn1nccc1-c1cnc(NCc2c(F)ccc3c2CCO3)n2cc(CO)nc12
C20H19FN6O2
394.410000
LLXHFIUGYZGCCC-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM727053; PubChem:CID155383080
Local ready
Direct docking supported
E3L036238
BDB036238
US12252493, Example 7
Cc1cc(-c2cnc(NCc3c(F)ccc4c3CCO4)n3cc(C(C)O)nc23)n(C)n1
C22H23FN6O2
422.464000
DZDBSOHOXMYOPS-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM727055; PubChem:CID155369148
Local ready
Direct docking supported
E3L036239
BDB036239
US12252493, Example 8
Cc1cc(-c2cnc(NCc3c(F)ccc4c3CCO4)n3cc(C(O)c4ccccc4)nc23)n(C)n1
C27H25FN6O2
484.535000
FRMGONKFGHGEDM-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM727056; PubChem:CID155369137
Local ready
Direct docking supported
E3L036240
BDB036240
US12252493, Example 9
COCc1cn2c(NCc3c(F)ccc4c3CCO4)ncc(-c3cc(C)nn3C)c2n1
C22H23FN6O2
422.464000
ZTWAOTIKFADHMT-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM727057; PubChem:CID155369171
Local ready
Direct docking supported