E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L036161
BDB036161
BDBM725767
CC(C)N(C(=O)c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(C[C@H]3CC[C@@]4(CC3)CC(=O)C(F)(F)C4)CC2)C1)C(C)C
C34H45F3N6O3
642.767000
WSRYBUKYTTUTOR-CZDZLMJVSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB
BindingDB:BDBM725767
Local ready
Direct docking supported
E3L036162
BDB036162
BDBM725768
CCN(C(=O)c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(C[C@H]3CC[C@@]4(CC3)CC(=O)[C@@H](C(C)(C)O)C4)CC2)C1)C(C)C
C36H51FN6O4
650.840000
JDRVFCKYBYIWSH-KNGBFLLCSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB
BindingDB:BDBM725768
Local ready
Direct docking supported
E3L036163
BDB036163
BDBM725769
CCN(C(=O)c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(C[C@H]3CC[C@@]4(CC3)CC(=O)[C@H](C(C)(C)O)C4)CC2)C1)C(C)C
C36H51FN6O4
650.840000
JDRVFCKYBYIWSH-RQDKSTKUSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB
BindingDB:BDBM725769
Local ready
Direct docking supported
E3L036164
BDB036164
BDBM725770
CC(C)N(C(=O)c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(C[C@H]3CC[C@@]4(CC3)CC(=O)C(C(C)(C)O)C4)CC2)C1)C(C)C
C37H53FN6O4
664.867000
UAZWKKAVUBRWFY-XAEXNWHRSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB
BindingDB:BDBM725770
Local ready
Direct docking supported
E3L036165
BDB036165
BDBM725771
CC(C)N(C(=O)c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(C[C@H]3CC[C@@]4(CC3)CC(=O)[C@@H](C(C)(C)O)C4)CC2)C1)C(C)C
C37H53FN6O4
664.867000
UAZWKKAVUBRWFY-QTJFSSSWSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB
BindingDB:BDBM725771
Local ready
Direct docking supported
E3L036166
BDB036166
BDBM725772
CC(C)N(C(=O)c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(C[C@H]3CC[C@@]4(CC3)CC(=O)[C@H](C(C)(C)O)C4)CC2)C1)C(C)C
C37H53FN6O4
664.867000
UAZWKKAVUBRWFY-UDUUFVARSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB
BindingDB:BDBM725772
Local ready
Direct docking supported
E3L036167
BDB036167
BDBM725773
CCN(C(=O)c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(C[C@H]3CC[C@@]4(CC3)CC(=O)C(=C(C)C)C4)CC2)C1)C(C)C
C36H49FN6O3
632.825000
YKPOVXJQYHWFPM-QFVVIJIBSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB
BindingDB:BDBM725773
Local ready
Direct docking supported
E3L036168
BDB036168
BDBM725774
CC(C)=C1C[C@]2(CC[C@@H](CN3CCC4(CC3)CN(c3ncnnc3Oc3ccc(F)cc3C(=O)N(C(C)C)C(C)C)C4)CC2)CC1=O
C37H51FN6O3
646.852000
SPKXVURUVGZZTQ-DWUBRUHCSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB
BindingDB:BDBM725774
Local ready
Direct docking supported
E3L036169
BDB036169
BDBM725775
CC(C)=C1C[C@]2(CC[C@@H](CN3CCC4(CC3)CN(c3ncnnc3Oc3ccc(F)cc3C(=O)N(C(C)C)C(C)C)C4)CC2)CC1=O
C37H51FN6O3
646.852000
SPKXVURUVGZZTQ-DWUBRUHCSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB
BindingDB:BDBM725775
Local ready
Direct docking supported
E3L036170
BDB036170
BDBM725776
CC(C)N(C(=O)c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(C[C@H]3CC[C@]4(CC3)CC(CO)(CO)C(=O)N4)CC2)C1)C(C)C
C35H50FN7O5
667.827000
SEEVQXRTXNOYRU-YHWSXCGTSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB
BindingDB:BDBM725776
Local ready
Direct docking supported
E3L036171
BDB036171
BDBM725777
CC(C)c1ncncc1-c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(C[C@H]3CC[C@@]4(CCC(=O)C4)CC3)CC2)C1
C34H42FN7O2
599.755000
BOBNWNPJZSXJKO-KFUJTCAESA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB
BindingDB:BDBM725777
Local ready
Direct docking supported
E3L036172
BDB036172
US20250082630, Example 1
CNC(=O)c1ccc(N2CCN(Cc3ccc4nc(C)c(=O)[nH]c4c3C)CC2)c(F)n1
C22H25FN6O2
424.480000
IVILHJJZBQECDP-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726496; PubChem:CID162524568
Local ready
Direct docking supported
E3L036173
BDB036173
US20250082630, Example 2
CNC(=O)c1ccc(N2CCN(Cc3ccc4c(c3C)CC(=O)C(C)=N4)CC2)cn1
C23H27N5O2
405.502000
SMXWAJUEVBPFSM-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726497; PubChem:CID163766476
Local ready
Direct docking supported
E3L036174
BDB036174
US20250082630, Example 3
CNC(=O)c1ccc(N2CCN(Cc3ccc4nc(C)c(=O)[nH]c4c3C)CC2)c(Cl)n1
C22H25ClN6O2
440.935000
CZRFCLLYCKTTHM-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726498; PubChem:CID162524577
Local ready
Direct docking supported
E3L036175
BDB036175
US20250082630, Example 4
CNC(=O)c1ccc(N2CCN(Cc3ccc4nc(C)c(=O)[nH]c4c3C)CC2)c(C)n1
C23H28N6O2
420.517000
STGKVKIQXWOWGS-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726499; PubChem:CID162524441
Local ready
Direct docking supported
E3L036176
BDB036176
US20250082630, Example 5
CC1=Nc2ccc(CN3CCN(c4ccc(C(N)=O)nc4F)CC3)c(C)c2CC1=O
C22H24FN5O2
409.465000
DBZRWJGTVUHJEW-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726500; PubChem:CID164040262
Local ready
Direct docking supported
E3L036177
BDB036177
US20250082630, Example 6
CC1=Nc2ccc(CN3CCN(c4ccc(C(N)=O)nc4C)CC3)c(F)c2CC1=O
C22H24FN5O2
409.465000
GTTUNDZFPRRXLZ-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726501; PubChem:CID163655674
Local ready
Direct docking supported
E3L036178
BDB036178
US20250082630, Example 7
CC1=Nc2ccc(CN3CCN(c4ccc(C(N)=O)nc4C)CC3)c(C)c2CC1=O
C23H27N5O2
405.502000
XKCSKSQFCOFDCH-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726502; PubChem:CID163591229
Local ready
Direct docking supported
E3L036179
BDB036179
US20250082630, Example 8
CCC1=Nc2ccc(CN3CCN(c4ccc(C(=O)NC)nc4Cl)CC3)c(Cl)c2CC1=O
C23H25Cl2N5O2
474.392000
BBZFZQCABMRZBW-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726503; PubChem:CID164089428
Local ready
Direct docking supported
E3L036180
BDB036180
US20250082630, Example 9
CCC1=Nc2ccc(CN3CCN(c4ccc(C(=O)NC)nc4F)CC3)c(Cl)c2CC1=O
C23H25ClFN5O2
457.937000
PIYNNHJDDQYGHY-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM726504; PubChem:CID163844158
Local ready
Direct docking supported