E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L036381
BDB036381
US20250092064, Example 105
CC[C@@H]1CN(Cc2cc([C@@H](CC(=O)O)c3cc(C4CC4)c4c(nnn4C)c3C)cc3c2CCC3)[C@@H](C)c2ncccc2O1
C35H41N5O3
579.745000
FKRDTLQFZWHMQR-LHKSUUPMSA-N Q14145 Kelch-like ECH-associated protein 1
BindingDB, PubChem
BindingDB:BDBM728918; PubChem:CID169261934
Local ready
Direct docking supported
E3L036382
BDB036382
US20250092064, Example 106
CC[C@@H]1CN(Cc2cc([C@H](CC(=O)O)c3cc(C4CC4)c4c(nnn4C)c3C)cc3c2CCC3)[C@@H](C)c2ncccc2O1
C35H41N5O3
579.745000
FKRDTLQFZWHMQR-BFJTUWMXSA-N Q14145 Kelch-like ECH-associated protein 1
BindingDB, PubChem
BindingDB:BDBM728919; PubChem:CID169261640
Local ready
Direct docking supported
E3L036383
BDB036383
US20250092064, Example 107
CCOC(=O)CC(c1cc2c(c(CN3C[C@@H](CC)Oc4cccnc4[C@@H]3C)c1)OCC2)c1cc(C2CC2)c2c(nnn2C)c1C
C36H43N5O4
609.771000
JQTWETWFPYNGTP-ZKJGBGOKSA-N Q14145 Kelch-like ECH-associated protein 1
BindingDB, PubChem
BindingDB:BDBM728920; PubChem:CID169261798
Local ready
Direct docking supported
E3L036384
BDB036384
US20250092064, Example 108
CCOC(=O)C[C@@H](c1cc(CN2C[C@@H](CC)Oc3ncc(Cl)cc3S2(=O)=O)c2sccc2c1)c1cc(OC(F)F)c2c(nnn2C)c1C
C32H32ClF2N5O6S2
720.220000
PSZSKDFSPWOWQR-VWNXMTODSA-N Q14145 Kelch-like ECH-associated protein 1
BindingDB, PubChem
BindingDB:BDBM728921; PubChem:CID169261613
Local ready
Direct docking supported
E3L036385
BDB036385
US20250092064, Example 109
CC[C@@H]1CN(Cc2cc(C(CC(=O)O)c3cc(C4CC4)c4c(nnn4C)c3C)cc3ccoc23)[C@@H](C)c2ncccc2O1
C34H37N5O4
579.701000
ZAMBGQOOJVXWOB-LMGBWPAFSA-N Q14145 Kelch-like ECH-associated protein 1
BindingDB, PubChem
BindingDB:BDBM728922; PubChem:CID169261908
Local ready
Direct docking supported
E3L036386
BDB036386
US20250092064, Example 110
CCOC(=O)CC(c1cc(CN2C[C@@H](CC)Oc3ncc(Cl)cc3S2(=O)=O)c2occc2c1)c1cc(C2CC2)c2c(nnn2C)c1C
C34H36ClN5O6S
678.211000
BZFMUYULIILUBC-CSMDKSQMSA-N Q14145 Kelch-like ECH-associated protein 1
BindingDB, PubChem
BindingDB:BDBM728923; PubChem:CID169261927
Local ready
Direct docking supported
E3L036387
BDB036387
US20250092064, Example 111
CCOc1ccc2c(n1)O[C@H](CC)CN(Cc1cc([C@H](CC(=O)O)c3ccc4c(nnn4C)c3C)cc3ccsc13)S2(=O)=O
C31H33N5O6S2
635.768000
SNLMVXRKXPVKTA-VWNXMTODSA-N Q14145 Kelch-like ECH-associated protein 1
BindingDB, PubChem
BindingDB:BDBM728924; PubChem:CID169261879
Local ready
Direct docking supported
E3L036388
BDB036388
US20250092064, Example 112
CCOc1ccc2c(n1)O[C@H](CC)CN(Cc1cc([C@@H](CC(=O)O)c3ccc4c(nnn4C)c3C)cc3ccsc13)S2(=O)=O
C31H33N5O6S2
635.768000
SNLMVXRKXPVKTA-ISKFKSNPSA-N Q14145 Kelch-like ECH-associated protein 1
BindingDB, PubChem
BindingDB:BDBM728925; PubChem:CID169261776
Local ready
Direct docking supported
E3L036389
BDB036389
BDBM730258
CN1CCCCN2CCCC(C2)Nc2ncc(C(F)(F)F)c(n2)-c2c[nH]c3c(P(C)(C)=O)c(ccc23)C1=O
C26H32F3N6O2P
548.550000
MAUGWAUUEVZZEV-UHFFFAOYSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM730258; PubChem:CID176511185
Local ready
Direct docking supported
E3L036390
BDB036390
BDBM730259
CN1CCCCN2CCCCC(C2)Nc2ncc(C(F)(F)F)c(n2)-c2c[nH]c3c(P(C)(C)=O)c(ccc23)C1=O
C27H34F3N6O2P
562.577000
AXPPFAXICUWCCP-UHFFFAOYSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM730259; PubChem:CID176511186
Local ready
Direct docking supported
E3L036391
BDB036391
BDBM730298
CP(C)(=O)c1c2ccc3c(c[nH]c13)-c1nc(ncc1C(F)(F)F)N[C@H]1CCCN(CCCCCCO2)C1
C26H33F3N5O2P
535.551000
UPCSHHMIPDWIOP-KRWDZBQOSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM730298; PubChem:CID176511206
Local ready
Direct docking supported
E3L036392
BDB036392
BDBM730299
CP(C)(=O)c1c2ccc3c(c[nH]c13)-c1nc(ncc1C(F)(F)F)N[C@H]1CCCN(CCCCNC2=O)C1
C25H30F3N6O2P
534.523000
GQSVAEJGZAOKMN-HNNXBMFYSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM730299; PubChem:CID176511207
Local ready
Direct docking supported
E3L036393
BDB036393
BDBM730300
CP(C)(=O)c1c2ccc3c(c[nH]c13)-c1nc(ncc1C(F)(F)F)N[C@H]1CCCCN(CCCCNC2=O)C1
C26H32F3N6O2P
548.550000
DVJZDPGHZSPMOA-INIZCTEOSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM730300; PubChem:CID176511208
Local ready
Direct docking supported
E3L036394
BDB036394
BDBM730301
COc1cccc(C(=O)NCc2cccc3c2CN(C2CCC(=O)NC2=O)C3=O)c1
C22H21N3O5
407.426000
HPTJNUKLJJOMFF-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM730301; PubChem:CID16117206
Local ready
Direct docking supported
E3L036395
BDB036395
BDBM730413
O=C1CCC(N2Cc3c(CNC(=O)c4cccc(Cl)c4)cccc3C2=O)C(=O)N1
C21H18ClN3O4
411.845000
YFCOKKDIZSBXCG-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM730413; PubChem:CID16117080
Local ready
Direct docking supported
E3L036396
BDB036396
BDBM730414
O=C1CCC(N2Cc3c(CNC(=O)c4ccccc4C(F)(F)F)cccc3C2=O)C(=O)N1
C22H18F3N3O4
445.397000
FWUPTIGYUITKOP-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM730414; PubChem:CID176511234
Local ready
Direct docking supported
E3L036397
BDB036397
BDBM730415
O=C1CCC(N2Cc3c(CNC(=O)c4ccc(Cl)cc4)cccc3C2=O)C(=O)N1
C21H18ClN3O4
411.845000
JDHGCFCWXWZWSX-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM730415; PubChem:CID176511235
Local ready
Direct docking supported
E3L036398
BDB036398
BDBM730417
O=C1CCC(N2Cc3c(CNC(=O)c4cccc(F)c4)cccc3C2=O)C(=O)N1
C21H18FN3O4
395.390000
NXNBBVHNOIYONY-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM730417; PubChem:CID176511236
Local ready
Direct docking supported
E3L036399
BDB036399
BDBM730418
O=C1CCC(N2Cc3c(CNC(=O)c4cccc(C(F)(F)F)c4)cccc3C2=O)C(=O)N1
C22H18F3N3O4
445.397000
KDNOCNVXVRVZCA-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM730418; PubChem:CID176511237
Local ready
Direct docking supported
E3L036400
BDB036400
BDBM730419
O=C1CCC(N2Cc3c(CNC(=O)c4ccc(C(F)(F)F)cc4)cccc3C2=O)C(=O)N1
C22H18F3N3O4
445.397000
NDKDDRAVMNNUPV-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM730419; PubChem:CID172877490
Local ready
Direct docking supported