E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L037921
BDB037921
BDBM743448
COC(=O)c1ccccc1C(=O)N1CC2(CC(=O)NC2=O)C1
C15H14N2O5
302.286000
RGDDZUBJQWLNJL-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM743448; PubChem:CID176734191
Local ready
Direct docking supported
E3L037922
BDB037922
BDBM743449
CN(C)C(=O)c1sccc1C(=O)N1CC2(CC(=O)NC2=O)C1
C14H15N3O4S
321.358000
VSRNXOIQPTYQMJ-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM743449; PubChem:CID176734192
Local ready
Direct docking supported
E3L037923
BDB037923
BDBM743450
CN(C)Cc1[nH]c2ccccc2c1C(=O)N1CC2(CC(=O)NC2=O)C1
C18H20N4O3
340.383000
XJINZHIOUBYOIF-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM743450; PubChem:CID176734193
Local ready
Direct docking supported
E3L037924
BDB037924
BDBM743451
CN(C)C(=O)c1[nH]c2ccccc2c1CN1CC2(CC(=O)NC2=O)C1
C18H20N4O3
340.383000
INKWKBFKGWFWSK-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM743451; PubChem:CID176734194
Local ready
Direct docking supported
E3L037925
BDB037925
BDBM743452
CN(C)C(=O)c1sc2ccccc2c1CN1CC2(CC(=O)NC2=O)C1
C18H19N3O3S
357.435000
TYGIXGUEHZEIQM-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM743452; PubChem:CID176734195
Local ready
Direct docking supported
E3L037926
BDB037926
BDBM743453
CN(C)C(=O)c1c(C(=O)N2CC3(CC(=O)NC3=O)C2)c2ccccc2n1C
C19H20N4O4
368.393000
TXDKGNWWKPGJMX-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM743453; PubChem:CID176734196
Local ready
Direct docking supported
E3L037927
BDB037927
BDBM743455
CN(C)C(=O)c1oc2ccccc2c1C(=O)N1CC2(CC(=O)NC2=O)C1
C18H17N3O5
355.350000
JBKXYRUORCLFAL-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM743455; PubChem:CID176734197
Local ready
Direct docking supported
E3L037928
BDB037928
US12310975, Example 62
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(OCCOCCOCCOCCOCCOc5ccc6c(c5)CN(C5CCC(=O)NC5=O)C6=O)CC4)ncc3Cl)ccc2n(C)c1=O
C45H55ClN8O12
935.432000
TXHYKNFVTJGVCC-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743615; PubChem:CID176371131
Local ready
Direct docking supported
E3L037929
BDB037929
US12310975, Example 104
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H43ClN10O7
811.300000
REAZTBHWFATGQD-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743616; PubChem:CID156278329
Local ready
Direct docking supported
E3L037930
BDB037930
US12310975, Example 119
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(OCCN5CCN(Cc6ccc(C#Cc7ccc8c(c7)CN(C7CCC(=O)NC7=O)C8=O)cc6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C50H53ClN10O7
941.490000
GMJDTEUPZRVCBT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743617; PubChem:CID156278476
Local ready
Direct docking supported
E3L037931
BDB037931
US12310975, Example 127
CNC(=O)COc1cc2cc(Nc3nc(N4CCCC(COc5ccc(C6CCN(CCC(O)c7ccc8c(c7)CN(C7CCC(=O)NC7=O)C8=O)CC6)cc5)C4)ncc3Cl)ccc2n(C)c1=O
C50H56ClN9O8
946.506000
LCAFDBMQDOCANZ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743618; PubChem:CID156278380
Local ready
Direct docking supported
E3L037932
BDB037932
US12310975, Example 128
CC(=O)COc1cc2cc(Nc3nc(N4CCC(OCCN5CCN(c6ccc7c(c6)CN(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H46ClN9O7
812.328000
DBSDKTRBZVQXET-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743619; PubChem:CID156292288
Local ready
Direct docking supported
E3L037933
BDB037933
US12310975, Example 137
CC(=O)COc1cc2cc(Nc3nc(N4CCN(CCCN5CCN(c6ccc7c(c6)CN(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H47ClN10O6
811.344000
CDUZANRATWUHMR-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743620; PubChem:CID156293070
Local ready
Direct docking supported
E3L037934
BDB037934
US12310975, Example 138
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(N(C)C5CCN(CC6CCN(c7ccc(C#Cc8ccc9c(c8)CN(C8CCC(=O)NC8=O)C9=O)cc7)CC6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C55H62ClN11O6
1008.625000
KSKDCOWLWLYKII-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743621; PubChem:CID156293068
Local ready
Direct docking supported
E3L037935
BDB037935
US12310975, Example 148
CC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H42ClN9O7
796.285000
IMNYLJSAJNHVJS-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743622; PubChem:CID156293069
Local ready
Direct docking supported
E3L037936
BDB037936
US12310975, Example 149
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C40H47ClN10O6
799.333000
FGMHZDHNXNHXAT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743623; PubChem:CID156278522
Local ready
Direct docking supported
E3L037937
BDB037937
US12310975, Example 150
Cn1c(=O)ccc2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C37H38ClN9O5
724.222000
XTVTXOONOHILSX-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743624; PubChem:CID176370980
Local ready
Direct docking supported
E3L037938
BDB037938
US12310975, Example 151
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)CN(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H45ClN10O6
797.317000
OYYJPHAVGBKMTQ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743625; PubChem:CID156292835
Local ready
Direct docking supported
E3L037939
BDB037939
US12310975, Example 152
CC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H42ClN9O7
796.285000
YIXHAZYBTMCRDB-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743626; PubChem:CID156292552
Local ready
Direct docking supported
E3L037940
BDB037940
US12310975, Example 153
CC(=O)COc1cc2cc(Nc3nc(N4CCC(C(=O)N5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H40ClN9O8
810.268000
XFIYAINVBYASKG-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743627; PubChem:CID156292834
Local ready
Direct docking supported