E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L037981
BDB037981
US12310975, Example 203
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(C(C)(C)C5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C42H47ClN10O7
839.354000
VSYJWZPMYGPKIE-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743668; PubChem:CID156278306
Local ready
Direct docking supported
E3L037982
BDB037982
US12310975, Example 204
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CC6CC5CN6c5ccc6c(c5)C(=O)N(C5CCC(=O)NC5=O)C6=O)CC4)ncc3Cl)ccc2n(C)c1=O
C41H43ClN10O7
823.311000
IWJCDKDKVRBOLN-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743669; PubChem:CID156293052
Local ready
Direct docking supported
E3L037983
BDB037983
US12310975, Example 205
Cn1cc(-c2cc3cc(Nc4nc(N5CCC(CN6CCN(c7ccc8c(c7)C(=O)N(C7CCC(=O)NC7=O)C8=O)CC6)CC5)ncc4Cl)ccc3n(C)c2=O)cn1
C41H42ClN11O5
804.312000
CGAILYSYZOMPQM-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743670; PubChem:CID176370915
Local ready
Direct docking supported
E3L037984
BDB037984
US12310975, Example 206
CC(=O)c1cc2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C39H40ClN9O6
766.259000
AEUAWGYFCAQNFB-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743671; PubChem:CID156292316
Local ready
Direct docking supported
E3L037985
BDB037985
US12310975, Example 207
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H43ClN10O7
811.300000
OYWYSDKQWOEHQI-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743672; PubChem:CID156278455
Local ready
Direct docking supported
E3L037986
BDB037986
US12310975, Example 208
CNC(=O)COc1cc2cc(Nc3nc(N4CCCN(c5ccc6c(c5)C(=O)N(C5CCC(=O)NC5=O)C6=O)CC4)ncc3Cl)ccc2n(C)c1=O
C35H34ClN9O7
728.166000
DZGGPBSYLAUNLJ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743673; PubChem:CID156291549
Local ready
Direct docking supported
E3L037987
BDB037987
US12310975, Example 209
CONC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H43ClN10O8
827.299000
WNZMXZRGIBMEIV-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743674; PubChem:CID156292628
Local ready
Direct docking supported
E3L037988
BDB037988
US12310975, Example 210
CNC(=O)[C@@H](C)Oc1cc2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N([C@H]6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H45ClN10O7
825.327000
GDMPZWGDDVAHOG-HEIROHQZSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743675; PubChem:CID176371005
Local ready
Direct docking supported
E3L037989
BDB037989
US12310975, Example 211
CNC(=O)[C@H](C)Oc1cc2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N([C@H]6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H45ClN10O7
825.327000
GDMPZWGDDVAHOG-UDNBHOFDSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743676; PubChem:CID176371096
Local ready
Direct docking supported
E3L037990
BDB037990
US12310975, Example 212
CNC(=O)[C@@H](C)Oc1cc2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N([C@@H]6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H45ClN10O7
825.327000
GDMPZWGDDVAHOG-JIYROHSKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743677; PubChem:CID176371020
Local ready
Direct docking supported
E3L037991
BDB037991
US12310975, Example 213
CNC(=O)[C@H](C)Oc1cc2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N([C@@H]6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H45ClN10O7
825.327000
GDMPZWGDDVAHOG-JPQMRUPTSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743678; PubChem:CID176371101
Local ready
Direct docking supported
E3L037992
BDB037992
US12310975, Example 214
CNC(=O)c1cc2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C39H41ClN10O6
781.274000
JRMPWCORIHWNIM-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743679; PubChem:CID156291477
Local ready
Direct docking supported
E3L037993
BDB037993
US12310975, Example 215
CNC(=O)COc1cc2cc(Nc3nc(N4CCCN(CC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H45ClN10O7
825.327000
NDQUUHJWRZNSMD-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743680; PubChem:CID156291479
Local ready
Direct docking supported
E3L037994
BDB037994
US12310975, Example 216
CC(=O)[C@@H](C)Oc1cc2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N([C@H]6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H44ClN9O7
810.312000
ODTCWBBSJVFWAH-IANOAQMISA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743681; PubChem:CID156291597
Local ready
Direct docking supported
E3L037995
BDB037995
US12310975, Example 217
CC(=O)[C@H](C)Oc1cc2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N([C@H]6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H44ClN9O7
810.312000
ODTCWBBSJVFWAH-RBBQXQBVSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743682; PubChem:CID156291596
Local ready
Direct docking supported
E3L037996
BDB037996
US12310975, Example 218
CC(=O)[C@@H](C)Oc1cc2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N([C@@H]6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H44ClN9O7
810.312000
ODTCWBBSJVFWAH-GJBXTBEHSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743683; PubChem:CID156292346
Local ready
Direct docking supported
E3L037997
BDB037997
US12310975, Example 219
CC(=O)[C@H](C)Oc1cc2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N([C@@H]6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H44ClN9O7
810.312000
ODTCWBBSJVFWAH-CAQRMWTPSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743684; PubChem:CID156292345
Local ready
Direct docking supported
E3L037998
BDB037998
US12310975, Example 220
CCC(=O)COc1cc2cc(Nc3nc(N4CCN(C5CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H42ClN9O7
796.285000
JAFQUFXPNLPDQK-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743685; PubChem:CID176734211
Local ready
Direct docking supported
E3L037999
BDB037999
US12310975, Example 221
CCC(=O)COc1cc2cc(Nc3nc(N4CCC(OC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H43ClN8O8
811.296000
VVCHSEPSCGBEJO-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743686; PubChem:CID176734212
Local ready
Direct docking supported
E3L038000
BDB038000
US12310975, Example 222
CNC(=O)COc1cc2cc(Nc3nc(N4CCO[C@@H](COc5ccc6c(c5)C(=O)N(C5CCC(=O)NC5=O)C6=O)C4)ncc3Cl)ccc2n(C)c1=O
C35H33ClN8O9
745.149000
POXGOCAZKVFHCQ-OSMGYRLQSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743687; PubChem:CID156292314
Local ready
Direct docking supported