E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L037941
BDB037941
US12310975, Example 154
CC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CCC(Oc6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)C4)ncc3Cl)ccc2n(C)c1=O
C40H41ClN8O8
797.269000
DPRBLSJRVYWERW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743628; PubChem:CID156278508
Local ready
Direct docking supported
E3L037942
BDB037942
US12310975, Example 155
CNC(=O)CCc1cc2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H45ClN10O6
809.328000
MCZVBTGRPWOQPI-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743629; PubChem:CID156292655
Local ready
Direct docking supported
E3L037943
BDB037943
US12310975, Example 156
Cn1c(=O)cc(NC(C)(C)c2ncccn2)c2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C44H47ClN12O5
859.392000
GOMFEPDACXXJRC-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743630; PubChem:CID156278319
Local ready
Direct docking supported
E3L037944
BDB037944
US12310975, Example 157
CC(=O)COc1cc2cc(Nc3nc(N4CCC(N5CCC(N(C)CCOc6ccc7c(c6)CN(C6CCC(=O)NC6=O)C7=O)C5)CC4)ncc3Cl)ccc2n(C)c1=O
C42H48ClN9O7
826.355000
PYJGIZVBYHIZJY-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743631; PubChem:CID176371125
Local ready
Direct docking supported
E3L037945
BDB037945
US12310975, Example 158
CC(=O)COc1cc2cc(Nc3nc(N4CCN(C5CCN(CCCOc6ccc7c(c6)CN(C6CCC(=O)NC6=O)C7=O)C5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H46ClN9O7
812.328000
WQABKRZESOKFMF-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743632; PubChem:CID176370974
Local ready
Direct docking supported
E3L037946
BDB037946
US12310975, Example 159
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(OCCCCOc5cc(-c6scnc6C)ccc5CNC(=O)[C@@H]5C[C@@H](O)CN5C(=O)C(c5cc(C)no5)C(C)C)CC4)ncc3Cl)ccc2n(C)c1=O
C51H61ClN10O9S
1025.630000
UXACSRZMRHRYJR-HOROBIPVSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743633; PubChem:CID176371023
Local ready
Direct docking supported
E3L037947
BDB037947
US12310975, Example 160
CC(=O)COc1cc2cc(Nc3nc(N4CCN(C5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C39H40ClN9O7
782.258000
RAYNNFZGXBSQDR-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743634; PubChem:CID156292664
Local ready
Direct docking supported
E3L037948
BDB037948
US12310975, Example 161
CC(=O)COc1cc2cc(Nc3nc(N4CCN(C5CCCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)C5)CC4)ncc3Cl)ccc2n(C)c1=O
C39H40ClN9O7
782.258000
BKZCJLHIHMEZHZ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743635; PubChem:CID156292667
Local ready
Direct docking supported
E3L037949
BDB037949
US12310975, Example 162
CC(=O)COc1cc2cc(Nc3nc(N4CCC(CCN5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H44ClN9O7
810.312000
GPBRHVJCSFBQNJ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743636; PubChem:CID156292656
Local ready
Direct docking supported
E3L037950
BDB037950
US12310975, Example 163
CC(=O)COc1cc2cc(Nc3nc(N4CCN(C(=O)C5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H40ClN9O8
810.268000
VPABGUUWHBCZCG-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743637; PubChem:CID156292654
Local ready
Direct docking supported
E3L037951
BDB037951
US12310975, Example 164
CC(=O)COc1cc2cc(Nc3nc(N4CCC(CCOC5CN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)C5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H41ClN8O8
797.269000
ZYMIXBXHTGTXDW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743638; PubChem:CID156278336
Local ready
Direct docking supported
E3L037952
BDB037952
US12310975, Example 165
CC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CC6(C5)CN(c5ccc7c(c5)C(=O)N(C5CCC(=O)NC5=O)C7=O)C6)CC4)ncc3Cl)ccc2n(C)c1=O
C41H42ClN9O7
808.296000
VOICOGBNRLLUEN-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743639; PubChem:CID156278394
Local ready
Direct docking supported
E3L037953
BDB037953
US12310975, Example 166
CN(C)C(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H45ClN10O7
825.327000
UHDBSYLHDFXKHV-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743640; PubChem:CID176371018
Local ready
Direct docking supported
E3L037954
BDB037954
US12310975, Example 167
CNC(=O)COc1cc2cc(Nc3nc(N4CCCC(COc5ccc(C6CCN(CC#Cc7ccc8c(c7)CN(C7CCC(=O)NC7=O)C8=O)CC6)cc5)C4)ncc3Cl)ccc2n(C)c1=O
C50H52ClN9O7
926.475000
WDABFWVBRXLBGY-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743641; PubChem:CID156278325
Local ready
Direct docking supported
E3L037955
BDB037955
US12310975, Example 168
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(OCCOCCOCCOCCCOc5ccc6c(c5)CN(C5CCC(=O)NC5=O)C6=O)CC4)ncc3Cl)ccc2n(C)c1=O
C44H53ClN8O11
905.406000
VRRVPJQZMQARNW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743642; PubChem:CID156292856
Local ready
Direct docking supported
E3L037956
BDB037956
US12310975, Example 169
CC(=O)COc1cc2cc(Nc3nc(N4CCC(N(C)C5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H44ClN9O7
810.312000
CGAPEIYSLSBLIQ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743643; PubChem:CID156278352
Local ready
Direct docking supported
E3L037957
BDB037957
US12310975, Example 170
CC(=O)COc1cc2cc(Nc3nc(N4CCC(OC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H41ClN8O8
797.269000
PLSYBWICMFRKJK-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743644; PubChem:CID156278334
Local ready
Direct docking supported
E3L037958
BDB037958
US12310975, Example 164
CC(=O)COc1cc2cc(Nc3nc(N4CCC(CCOC5CN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)C5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H41ClN8O8
797.269000
ZYMIXBXHTGTXDW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743645; PubChem:CID156278336
Local ready
Direct docking supported
E3L037959
BDB037959
US12310975, Example 172
CC(=O)COc1cc2cc(Nc3nc(N4CC(OCCN5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)C4)ncc3Cl)ccc2n(C)c1=O
C39H40ClN9O8
798.257000
PEHZTJPCCUVURN-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743646; PubChem:CID176371058
Local ready
Direct docking supported
E3L037960
BDB037960
US12310975, Example 173
CC(=O)COc1cc2cc(Nc3nc(C#CC4CCCN(Cc5ccc6c(c5)C(=O)N(C5CCC(=O)NC5=O)C6=O)C4)ncc3Cl)ccc2n(C)c1=O
C38H34ClN7O7
736.185000
BRKXFYPZGBLMLE-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743647; PubChem:CID156278526
Local ready
Direct docking supported