E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L038781
BDB038781
H-His(1-Me)-Ile-Phe-NH2
CC[C@H](C)[C@H](NC(=O)[C@@H](N)Cc1cn(C)cn1)C(=O)N[C@@H](Cc1ccccc1)C(N)=O
C22H32N6O3
428.537000
RJURKSQFEQCNPE-QZHFEQFPSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR1, E3 ubiquitin-protein ligase UBR2
BindingDB, PubChem
BindingDB:BDBM748325; PubChem:CID176780154
Local ready
Direct docking supported
E3L038782
BDB038782
H-Arg(CH2CF3)(CH2CF3)-Tyr(Me)-Phe-NH2
COc1ccc(C[C@H](NC(=O)[C@@H](N)CCCNC(=N)NCC(F)(F)F)C(=O)N[C@@H](Cc2ccccc2)C(N)=O)cc1
C27H36F3N7O4
579.624000
GQFGBSPTKCYADU-FKBYEOEOSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR2, E3 ubiquitin-protein ligase UBR1
BindingDB, PubChem
BindingDB:BDBM748326; PubChem:CID177372822
Local ready
Direct docking supported
E3L038783
BDB038783
H-Arg(Me2)-Tyr(Me)-Phe-NH2
COc1ccc(C[C@H](NC(=O)[C@@H](N)CCCNC(=N)N(C)C)C(=O)N[C@@H](Cc2ccccc2)C(N)=O)cc1
C27H39N7O4
525.654000
DGTKNZNFSHQPEA-VABKMULXSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR2, E3 ubiquitin-protein ligase UBR1
BindingDB, PubChem
BindingDB:BDBM748327; PubChem:CID176780164
Local ready
Direct docking supported
E3L038784
BDB038784
H-D-Phe(4-guanidino)-Tyr(Me)-Phe-NH2
COc1ccc(C[C@H](NC(=O)[C@H](N)Cc2ccc(N=C(N)N)cc2)C(=O)N[C@@H](Cc2ccccc2)C(N)=O)cc1
C29H35N7O4
545.644000
UVJIJLXAJPTNJM-DSITVLBTSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR1, E3 ubiquitin-protein ligase UBR2
BindingDB, PubChem
BindingDB:BDBM748328; PubChem:CID170209549
Local ready
Direct docking supported
E3L038785
BDB038785
BDBM748329
NCC(=O)N[C@@H](Cc1ccc(O)c([N+](=O)[O-])c1)C(N)=O
C11H14N4O5
282.256000
HGFDARWBRKQDNA-ZETCQYMHSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR1, E3 ubiquitin-protein ligase UBR2
BindingDB, PubChem
BindingDB:BDBM748329; PubChem:CID169180640
Local ready
Direct docking supported
E3L038786
BDB038786
BDBM748330
NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@@H](N)Cc1ccc(O)c([N+](=O)[O-])c1
C18H20N4O5
372.381000
MYTKKJLHGLDUJF-KBPBESRZSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR2, E3 ubiquitin-protein ligase UBR1
BindingDB, PubChem
BindingDB:BDBM748330; PubChem:CID176780162
Local ready
Direct docking supported
E3L038787
BDB038787
H-Arg(Me2)-Tyr(3-NO2)-Phe-NH2
CN(C)C(=N)NCCC[C@H](N)C(=O)N[C@@H](Cc1ccc(O)c([N+](=O)[O-])c1)C(=O)N[C@@H](Cc1ccccc1)C(N)=O
C26H36N8O6
556.624000
MVEMAQUSIJXAJW-UFYCRDLUSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR2, E3 ubiquitin-protein ligase UBR1
BindingDB, PubChem
BindingDB:BDBM748331; PubChem:CID176780163
Local ready
Direct docking supported
E3L038788
BDB038788
H-Arg(CH2CF3)(CH2CF3)-Tyr(3-Cl)-Phe-NH2
N=C(NCCC[C@H](N)C(=O)N[C@@H](Cc1ccc(O)c(Cl)c1)C(=O)N[C@@H](Cc1ccccc1)C(N)=O)NCC(F)(F)F
C26H33ClF3N7O4
600.042000
YBKNZVIKCGFHAF-UFYCRDLUSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR1, E3 ubiquitin-protein ligase UBR2
BindingDB, PubChem
BindingDB:BDBM748332; PubChem:CID177372823
Local ready
Direct docking supported
E3L038789
BDB038789
H-2Thi-Ile-Phe-NH2
CC[C@H](C)[C@H](NC(=O)[C@@H](N)Cc1cccs1)C(=O)N[C@@H](Cc1ccccc1)C(N)=O
C22H30N4O3S
430.574000
BTCMYKMDRSRZKC-QZHFEQFPSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR1, E3 ubiquitin-protein ligase UBR2
BindingDB, PubChem
BindingDB:BDBM748333; PubChem:CID176780161
Local ready
Direct docking supported
E3L038790
BDB038790
H-4Pal-Phe-Ile-NH2
CC[C@H](C)[C@H](NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@@H](N)Cc1ccncc1)C(N)=O
C23H31N5O3
425.533000
NCJYTFPVACXDBL-KNTRFNDTSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR1, E3 ubiquitin-protein ligase UBR2
BindingDB, PubChem
BindingDB:BDBM748334; PubChem:CID169180620
Local ready
Direct docking supported
E3L038791
BDB038791
H-4Pal-Ile-Phe-NH2
CC[C@H](C)[C@H](NC(=O)[C@@H](N)Cc1ccncc1)C(=O)N[C@@H](Cc1ccccc1)C(N)=O
C23H31N5O3
425.533000
NYJIJBKRGQVWHM-KNTRFNDTSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR2, E3 ubiquitin-protein ligase UBR1
BindingDB, PubChem
BindingDB:BDBM748335; PubChem:CID169180628
Local ready
Direct docking supported
E3L038792
BDB038792
H-Phe(4-NHAc)-xiIle-Phe-NH2
CCC(C)[C@H](NC(=O)[C@@H](N)Cc1ccc(NC(C)=O)cc1)C(=O)N[C@@H](Cc1ccccc1)C(N)=O
C26H35N5O4
481.597000
URJLASSSOHAFDV-QVTSAZHYSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR2, E3 ubiquitin-protein ligase UBR1
BindingDB, PubChem
BindingDB:BDBM748336; PubChem:CID169180651
Local ready
Direct docking supported
E3L038793
BDB038793
H-Arg-Tyr(3-Cl)-Phe-NH2
N=C(N)NCCC[C@H](N)C(=O)N[C@@H](Cc1ccc(O)c(Cl)c1)C(=O)N[C@@H](Cc1ccccc1)C(N)=O
C24H32ClN7O4
518.018000
AOPLLVOEHUILGC-FHWLQOOXSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR2, E3 ubiquitin-protein ligase UBR1
BindingDB, PubChem
BindingDB:BDBM748337; PubChem:CID176780165
Local ready
Direct docking supported
E3L038794
BDB038794
BDBM748338
CC(C[C@H](NC(=O)[C@@H](N)CCCNC(=N)N)C(=O)N[C@@H](Cc1ccccc1)C(N)=O)C(F)(F)F
C21H32F3N7O3
487.527000
SEDUFYWKLCXXLQ-QJIWQAPWSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR2, E3 ubiquitin-protein ligase UBR1
BindingDB, PubChem
BindingDB:BDBM748338; PubChem:CID176780156
Local ready
Direct docking supported
E3L038795
BDB038795
H-Arg-DL-xiIle-Phe-NH2
CCC(C)C(NC(=O)[C@@H](N)CCCNC(=N)N)C(=O)N[C@@H](Cc1ccccc1)C(N)=O
C21H35N7O3
433.557000
XVVYOVGROLTMFF-DBGUYSSFSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR2, E3 ubiquitin-protein ligase UBR1
BindingDB, PubChem
BindingDB:BDBM748339; PubChem:CID169180625
Local ready
Direct docking supported
E3L038796
BDB038796
H-Arg(Me2)-Tyr(3-F)-Phe-NH2
CN(C)C(=N)NCCC[C@H](N)C(=O)N[C@@H](Cc1ccc(O)c(F)c1)C(=O)N[C@@H](Cc1ccccc1)C(N)=O
C26H36FN7O4
529.617000
YWJKSRXESQEALE-ACRUOGEOSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR2, E3 ubiquitin-protein ligase UBR1
BindingDB, PubChem
BindingDB:BDBM748340; PubChem:CID169180653
Local ready
Direct docking supported
E3L038797
BDB038797
H-Arg(Me2)-Tza-Phe-NH2
CN(C)C(=N)NCCC[C@H](N)C(=O)N[C@@H](Cc1cscn1)C(=O)N[C@@H](Cc1ccccc1)C(N)=O
C23H34N8O3S
502.645000
DHIVVRYVYJSKPY-FHWLQOOXSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR2, E3 ubiquitin-protein ligase UBR1
BindingDB, PubChem
BindingDB:BDBM748341; PubChem:CID169180634
Local ready
Direct docking supported
E3L038798
BDB038798
H-Arg(Me2)-2Thi-Phe-NH2
CN(C)C(=N)NCCC[C@H](N)C(=O)N[C@@H](Cc1cccs1)C(=O)N[C@@H](Cc1ccccc1)C(N)=O
C24H35N7O3S
501.657000
JVBJWHNWEYDUKR-UFYCRDLUSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR2, E3 ubiquitin-protein ligase UBR1
BindingDB, PubChem
BindingDB:BDBM748342; PubChem:CID169180595
Local ready
Direct docking supported
E3L038799
BDB038799
H-Arg(Me2)-Pro-Phe-NH2
CN(C)C(=N)NCCC[C@H](N)C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1ccccc1)C(N)=O
C22H35N7O3
445.568000
RLVGSUYFFHCIEO-BZSNNMDCSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR1, E3 ubiquitin-protein ligase UBR2
BindingDB, PubChem
BindingDB:BDBM748343; PubChem:CID169180644
Local ready
Direct docking supported
E3L038800
BDB038800
H-Arg(Me2)-Ile-Phe-NH2
CC[C@H](C)[C@H](NC(=O)[C@@H](N)CCC/N=C(\N)N(C)C)C(=O)N[C@@H](Cc1ccccc1)C(N)=O
C23H39N7O3
461.611000
XEHSGEKOVYDRRP-WNHJNPCNSA-N Q8IWV7, Q8IWV8 E3 ubiquitin-protein ligase UBR1, E3 ubiquitin-protein ligase UBR2
BindingDB, PubChem
BindingDB:BDBM748344; PubChem:CID169180652
Local ready
Direct docking supported