E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L004221
BDB004221
BDBM96994
Cc1nn(C2CCC(=O)NC2=O)c2ccc(N3CCN(CC4CC5(CCN(c6ccc([C@@H]7c8ccc(O)cc8OC[C@@H]7c7ccccc7)cc6)CC5)C4)CC3)cc12
C47H52N6O4
764.971000
BEBXTZTZHAHQSO-OJXSZKPQSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM96994; PubChem:CID170728350
Local ready
Direct docking supported
E3L004222
BDB004222
BDBM96995
O=C1CCC(N2C(=O)c3cc4c(cc3C2=O)CN(CC(=O)N2CC3(CCN(c5ccc([C@@H]6c7ccc(O)cc7OC[C@@H]6c6ccccc6)cc5)CC3)C2)C4)C(=O)N1
C45H43N5O7
765.867000
JPEBSIKGHPZPGX-QDPYUFFZSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM96995
Local ready
Direct docking supported
E3L004223
BDB004223
BDBM96996
O=C1CCC(N2Cc3cc4c(cc3C2=O)OC[C@@H]2CN(CC3CC5(CCN(c6ccc([C@H]7c8ccc(O)cc8OC[C@H]7c7ccccc7)cc6)CC5)C3)CCN42)C(=O)N1
C48H51N5O6
793.965000
JGUADLWFBMOXGP-DBIRBHGLSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM96996
Local ready
Direct docking supported
E3L004224
BDB004224
BDBM96997
O=C1CCC(N2Cc3cc4c(cc3C2=O)OC[C@@H]2CN(CC3CC5(CCN(c6ccc([C@@H]7c8ccc(O)cc8OC[C@@H]7c7ccccc7)cc6)CC5)C3)CCN42)C(=O)N1
C48H51N5O6
793.965000
JGUADLWFBMOXGP-UIMDZVHESA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM96997
Local ready
Direct docking supported
E3L004225
BDB004225
BDBM96998
O=C1CCC(Nc2ccc(N3CCN(CC4CCN(c5ccc([C@@H]6c7ccc(O)cc7OC[C@@H]6c6ccccc6)cc5F)CC4)CC3)c(F)c2)C(=O)N1
C42H45F2N5O4
721.849000
XONHEANMPMHLIL-CLFJDZNDSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM96998; PubChem:CID177910026
Local ready
Direct docking supported
E3L004226
BDB004226
BDBM96999
O=C1CCC(Nc2ccc(N3CCN(CC4CCN(c5ccc([C@@H]6c7ccc(O)cc7OC[C@@H]6c6ccccc6)cc5)CC4)CC3)c(F)c2)C(=O)N1
C42H46FN5O4
703.859000
JSPQHEGDRJAZKU-CXTGPZRRSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM96999; PubChem:CID170728643
Local ready
Direct docking supported
E3L004227
BDB004227
BDBM97000
O=C1CCC(N2C(=O)c3cc4c(cc3C2=O)CN(CC(=O)N2CCC3(CC2)CCN(c2ccc([C@@H]5c6ccc(O)cc6OC[C@@H]5c5ccccc5)cc2)CC3)C4)C(=O)N1
C47H47N5O7
793.921000
YDMQYRRRRMPTJD-PQGYCHLWSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97000
Local ready
Direct docking supported
E3L004228
BDB004228
BDBM97001
O=C1CCC(N2C(=O)c3cc4c(cc3C2=O)CN(C(=O)CN2CC3(CCN(c5ccc([C@@H]6c7ccc(O)cc7OC[C@@H]6c6ccccc6)cc5)CC3)C2)C4)C(=O)N1
C45H43N5O7
765.867000
ZMDNGTWULHGEKN-QDPYUFFZSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97001
Local ready
Direct docking supported
E3L004229
BDB004229
BDBM97002
COc1cccc([C@H]2COc3cc(O)ccc3[C@H]2c2ccc(N3CCC(CN4CCN5c6ccc7c(c6OC[C@H]5C4)CN(C4CCC(=O)NC4=O)C7=O)CC3)cc2)c1
C46H49N5O7
783.926000
OTLGVHCCZYBXFT-CCOAXIEXSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97002
Local ready
Direct docking supported
E3L004230
BDB004230
BDBM97003
COc1cccc([C@@H]2COc3cc(O)ccc3[C@@H]2c2ccc(N3CCC(CN4CCN5c6ccc7c(c6OC[C@H]5C4)CN(C4CCC(=O)NC4=O)C7=O)CC3)cc2)c1
C46H49N5O7
783.926000
OTLGVHCCZYBXFT-AONKCEDPSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97003
Local ready
Direct docking supported
E3L004231
BDB004231
BDBM97004
O=C1CCC(N2Cc3c(ccc4c3OC[C@H]3CN(CC5CCN(c6ncc([C@H]7c8ccc(O)cc8OC[C@H]7c7ccccc7)cn6)CC5)CCN43)C2=O)C(=O)N1
C43H45N7O6
755.876000
RPFWZHFAZYZAOK-RHVWPSGQSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97004
Local ready
Direct docking supported
E3L004232
BDB004232
BDBM97006
O=C1CCC(N2Cc3c(ccc4c3OC[C@H]3CN(CC5CCN(c6ncc([C@@H]7c8ccc(O)cc8OC[C@@H]7c7ccccc7)cn6)CC5)CCN43)C2=O)C(=O)N1
C43H45N7O6
755.876000
RPFWZHFAZYZAOK-MUYMVOOUSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97006
Local ready
Direct docking supported
E3L004233
BDB004233
BDBM97007
O=C1CC[C@H](N2Cc3c(ccc4c3OC[C@H]3CN(CC5CC6(CCN(c7ccc([C@@H]8c9ccc(O)cc9OC[C@@H]8c8ccccc8)cc7)CC6)C5)CCN43)C2=O)C(=O)N1
C48H51N5O6
793.965000
SSNYEZAYMZGQKT-YFRYQBHSSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97007
Local ready
Direct docking supported
E3L004234
BDB004234
BDBM97008
O=C1CCC(N2C(=O)c3cc4c(cc3C2=O)CN(CC(=O)N2CCC3(CC2)CN(c2ccc([C@H]5c6ccc(O)cc6OC[C@H]5c5ccccc5)cc2)C3)C4)C(=O)N1
C45H43N5O7
765.867000
BXVMSRJPFSOBKE-VIKHGVINSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97008
Local ready
Direct docking supported
E3L004235
BDB004235
BDBM97009
O=C1CCC(N2C(=O)c3cc4c(cc3C2=O)CN(CC(=O)N2CC3(CCN(c5ccc([C@H]6c7ccc(O)cc7OC[C@H]6c6ccccc6)cc5)CC3)C2)C4)C(=O)N1
C45H43N5O7
765.867000
JPEBSIKGHPZPGX-VIKHGVINSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97009
Local ready
Direct docking supported
E3L004236
BDB004236
BDBM97010
O=C1CCC(N2C(=O)c3cc4c(cc3C2=O)CN(CC(=O)N2CCC3(CC2)CCN(c2ccc([C@H]5c6ccc(O)cc6OC[C@H]5c5ccccc5)cc2)CC3)C4)C(=O)N1
C47H47N5O7
793.921000
YDMQYRRRRMPTJD-DHFQGNFWSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97010
Local ready
Direct docking supported
E3L004237
BDB004237
BDBM97011
O=C1CC[C@@H](N2Cc3cc4c(cc3C2=O)CN(C(=O)CN2CCC3(CC2)CCN(c2ccc([C@H]5c6ccc(O)cc6OC[C@H]5c5ccccc5)cc2)CC3)C4)C(=O)N1
C47H49N5O6
779.938000
WFNJFSDLQSHAAO-HDNAJYLWSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97011
Local ready
Direct docking supported
E3L004238
BDB004238
BDBM97012
O=C1CCC(N2Cc3cc4c(cc3C2=O)CN(C(=O)CN2CCC3(CC2)CCN(c2ccc([C@@H]5c6ccc(O)cc6OC[C@@H]5c5ccccc5)cc2)CC3)C4)C(=O)N1
C47H49N5O6
779.938000
WFNJFSDLQSHAAO-LVWREAIBSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97012
Local ready
Direct docking supported
E3L004239
BDB004239
BDBM97013
O=C1CCC(N2Cc3cc4c(cc3C2=O)CN(C(=O)CN2CCC3(CC2)CCN(c2ccc([C@H]5c6ccc(O)cc6OC[C@H]5c5ccccc5)cc2)CC3)C4)C(=O)N1
C47H49N5O6
779.938000
WFNJFSDLQSHAAO-QFXYJWSKSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97013
Local ready
Direct docking supported
E3L004240
BDB004240
BDBM97014
O=C1CCC(N2C(=O)c3cc4c(cc3C2=O)CN(CC(=O)N2CCC3(CC2)CN(c2ccc([C@@H]5c6ccc(O)cc6OC[C@@H]5c5ccccc5)cc2)C3)C4)C(=O)N1
C45H43N5O7
765.867000
BXVMSRJPFSOBKE-QDPYUFFZSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97014
Local ready
Direct docking supported