E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L004321
BDB004321
BDBM97099
O=C1CCC(NC(=O)c2ccc(N3CCC(CN4CCN(c5ccc([C@H]6c7ccc(O)cc7OC[C@H]6c6ccccc6)cc5)CC4)CC3)cn2)C(=O)N1
C42H46N6O5
714.867000
SAHKNDRITROFCC-KKNODEMTSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM97099; PubChem:CID170728479
Local ready
Direct docking supported
E3L004322
BDB004322
BDBM97100
O=C1CCC(NC(=O)c2ccc(N3CCC(CN4CCN(c5ccc([C@H]6c7ccc(O)cc7OC[C@H]6c6ccccc6)cc5)CC4)CC3)cn2)C(=O)N1
C42H46N6O5
714.867000
SAHKNDRITROFCC-KKNODEMTSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM97100; PubChem:CID170728479
Local ready
Direct docking supported
E3L004323
BDB004323
BDBM97101
COc1cc(N2CCC3(CC2)CC(CN2CCC4(CC2)COc2c4ccc4c2CN(C2CCC(=O)NC2=O)C4=O)C3)c(F)cc1[C@H]1c2ccc(O)cc2OC[C@H]1c1ccccc1
C50H53FN4O7
840.993000
STVVTUOREOYWID-KJCJHXACSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97101
Local ready
Direct docking supported
E3L004324
BDB004324
BDBM97102
COc1cc(N2CCC3(CC2)CC(CN2CCC4(CC2)COc2c4ccc4c2CN(C2CCC(=O)NC2=O)C4=O)C3)c(F)cc1[C@H]1c2ccc(O)cc2OC[C@H]1c1ccccc1
C50H53FN4O7
840.993000
STVVTUOREOYWID-KJCJHXACSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97102
Local ready
Direct docking supported
E3L004325
BDB004325
BDBM97103
O=C1CC[C@@H](N2Cc3c(ccc4c3OC[C@@H]3CN(C[C@@H]5COC6(CCN(c7ccc([C@H]8c9ccc(O)cc9OC[C@H]8c8ccccc8)cc7)CC6)C5)CCN43)C2=O)C(=O)N1
C48H51N5O7
809.964000
NGKUCSTXXZJYFQ-NDPDFARVSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97103
Local ready
Direct docking supported
E3L004326
BDB004326
BDBM97104
O=C1CC[C@@H](N2Cc3c(ccc4c3OC[C@@H]3CN(C[C@H]5COC6(CCN(c7ccc([C@H]8c9ccc(O)cc9OC[C@H]8c8ccccc8)cc7)CC6)C5)CCN43)C2=O)C(=O)N1
C48H51N5O7
809.964000
NGKUCSTXXZJYFQ-DXRBWDAFSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97104
Local ready
Direct docking supported
E3L004327
BDB004327
BDBM97105
COc1cc(N2CCC(CN3CCN4c5ccc(C(=O)NC6CCC(=O)NC6=O)nc5OC[C@H]4C3)CC2)ccc1[C@@H]1c2ccc(O)cc2OC[C@@H]1c1ccccc1
C44H48N6O7
772.903000
SVMHYDKBQVEMPG-COUBYJJRSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97105
Local ready
Direct docking supported
E3L004328
BDB004328
BDBM97106
COc1cc(N2CCC(CN3CCC4(CC3)COc3c4ccc4c3CN(C3CCC(=O)NC3=O)C4=O)CC2)ccc1[C@H]1c2ccc(O)cc2OC[C@H]1c1ccccc1
C47H50N4O7
782.938000
HWCRAIQSYXFHSR-AXGFXAMOSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97106
Local ready
Direct docking supported
E3L004329
BDB004329
BDBM97107
COc1cc(N2CCC(CN3CCC4(CC3)COc3cc5c(cc34)CN(C3CCC(=O)NC3=O)C5=O)CC2)ccc1[C@H]1c2ccc(O)cc2OC[C@H]1c1ccccc1
C47H50N4O7
782.938000
BLLHNCYYRIJFSD-VLFIJZMYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97107
Local ready
Direct docking supported
E3L004330
BDB004330
BDBM97108
O=C1CCC(N2Cc3ccc4c(c3C2=O)OCC42CCN(CC3COC4(CCN(c5ccc([C@H]6c7ccc(O)cc7OC[C@H]6c6ccccc6)cc5)CC4)C3)CC2)C(=O)N1
C49H52N4O7
808.976000
QCJKIAQNQAZEPK-RIPBKVNYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97108
Local ready
Direct docking supported
E3L004331
BDB004331
BDBM97109
O=C1CC[C@@H](N2Cc3cc4c(cc3C2=O)OC[C@H]2CN(CC3COC5(CCN(c6ccc([C@H]7c8ccc(O)cc8OC[C@H]7c7ccccc7)cc6)CC5)C3)CCN42)C(=O)N1
C48H51N5O7
809.964000
NEVLLZDNWSSISS-JWCQWZMLSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97109
Local ready
Direct docking supported
E3L004332
BDB004332
BDBM97110
O=C1CC[C@@H](N2Cc3cc4c(cc3C2=O)OC[C@H]2CN(CC3COC5(CCN(c6ccc([C@@H]7c8ccc(O)cc8OC[C@@H]7c7ccccc7)cc6)CC5)C3)CCN42)C(=O)N1
C48H51N5O7
809.964000
NEVLLZDNWSSISS-VHJUSVDWSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97110
Local ready
Direct docking supported
E3L004333
BDB004333
BDBM97111
O=C1CC[C@@H](Nc2ccc(C3CCN(CC4CCC5(CC4)CN(c4ccc([C@H]6c7ccc(O)cc7OC[C@H]6c6ccccc6)cc4)C5)CC3)cc2)C(=O)N1
C46H52N4O4
724.946000
FXZDRKDLUPUSJF-OHJVXUKZSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM97111; PubChem:CID177910037
Local ready
Direct docking supported
E3L004334
BDB004334
BDBM97112
O=C1CC[C@@H](Nc2ccc(C3CCN(CC4CCC5(CC4)CN(c4ccc([C@@H]6c7ccc(O)cc7OC[C@@H]6c6ccccc6)cc4)C5)CC3)cc2)C(=O)N1
C46H52N4O4
724.946000
FXZDRKDLUPUSJF-DFFQZVHSSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM97112; PubChem:CID177910049
Local ready
Direct docking supported
E3L004335
BDB004335
BDBM97113
O=C1CC[C@H](NC(=O)c2ccc3c(n2)OCC2CN(CC4CCC5(CC4)CN(c4ccc([C@@H]6c7ccc(O)cc7OC[C@@H]6c6ccccc6)cc4)C5)CCN32)C(=O)N1
C46H50N6O6
782.942000
GKZULFGHRFBJMC-DZPLXULPSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97113
Local ready
Direct docking supported
E3L004336
BDB004336
BDBM97114
COc1cc(C(=O)N[C@@H]2CCC(=O)NC2=O)ncc1N1CCN(CC2CCC3(CC2)CN(c2ccc([C@H]4c5ccc(O)cc5OC[C@H]4c4ccccc4)cc2)C3)CC1
C46H52N6O6
784.958000
VTECJCSWJYJOBF-WVMOZGFBSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97114
Local ready
Direct docking supported
E3L004337
BDB004337
BDBM97115
O=C1CC[C@@H](NC(=O)c2ccc(N3CCN(CC4COC5(CCN(c6ccc([C@H]7c8ccc(O)cc8OC[C@H]7c7ccccc7)cc6)CC5)C4)CC3)cn2)C(=O)N1
C45H50N6O6
770.931000
ZGGLXGNUSDKTMR-RFEQVNLESA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM97115; PubChem:CID177910085
Local ready
Direct docking supported
E3L004338
BDB004338
BDBM97116
O=C1CCC(N2Cc3c(ccc4c3OCC43CCN(CC4COC5(CCN(c6ccc([C@H]7c8ccc(O)cc8OC[C@H]7c7ccccc7)cc6)CC5)C4)CC3)C2=O)C(=O)N1
C49H52N4O7
808.976000
LFJJUGKUGCAABV-IVIYUGEWSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97116
Local ready
Direct docking supported
E3L004339
BDB004339
BDBM97117
O=C1CC[C@H](NC(=O)c2ccc3c(n2)OC[C@H]2CN(C[C@H]4COC5(CCN(c6ccc([C@@H]7c8ccc(O)cc8OC[C@@H]7c7ccccc7)cc6)CC5)C4)CCN32)C(=O)N1
C46H50N6O7
798.941000
JTVVMXJVTIJQEP-WYAGUOBASA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97117
Local ready
Direct docking supported
E3L004340
BDB004340
BDBM97118
O=C1CC[C@H](NC(=O)c2ccc3c(n2)OC[C@H]2CN(C[C@@H]4COC5(CCN(c6ccc([C@@H]7c8ccc(O)cc8OC[C@@H]7c7ccccc7)cc6)CC5)C4)CCN32)C(=O)N1
C46H50N6O7
798.941000
JTVVMXJVTIJQEP-AAXWTOBDSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97118
Local ready
Direct docking supported