E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L004341
BDB004341
BDBM97119
COc1cc(N2CCC(CN3CCC(c4ccc(N[C@@H]5CCC(=O)NC5=O)cc4)CC3)CC2)ccc1[C@H]1c2ccc(O)cc2OC[C@H]1c1ccccc1
C44H50N4O5
714.907000
OMYSZRUHIMRJIW-SEMJGQCXSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM97119; PubChem:CID170728616
Local ready
Direct docking supported
E3L004342
BDB004342
BDBM97120
COc1cc(N2CCC(CN3CCC(c4ccc(N[C@@H]5CCC(=O)NC5=O)cc4)CC3)CC2)ccc1[C@@H]1c2ccc(O)cc2OC[C@@H]1c1ccccc1
C44H50N4O5
714.907000
OMYSZRUHIMRJIW-KJSNRZPDSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM97120; PubChem:CID177909922
Local ready
Direct docking supported
E3L004343
BDB004343
BDBM97121
O=C1CC[C@@H](N2Cc3cc4c(cc3C2=O)OC[C@@H]2CN(CC3COC5(CCN(c6ccc([C@H]7c8ccc(O)cc8OC[C@H]7c7ccccc7)cc6)CC5)C3)CCN42)C(=O)N1
C48H51N5O7
809.964000
NEVLLZDNWSSISS-RPOUOCKOSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97121
Local ready
Direct docking supported
E3L004344
BDB004344
BDBM97122
O=C1CC[C@@H](N2Cc3cc4c(cc3C2=O)OC[C@@H]2CN(CC3COC5(CCN(c6ccc([C@H]7c8ccc(O)cc8OC[C@H]7c7ccccc7)cc6)CC5)C3)CCN42)C(=O)N1
C48H51N5O7
809.964000
NEVLLZDNWSSISS-RPOUOCKOSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97122
Local ready
Direct docking supported
E3L004345
BDB004345
BDBM97123
O=C1CC[C@@H](N2Cc3cc4c(cc3C2=O)OCC42CCN(CC3CCC4(CC3)CN(c3ccc([C@H]5c6ccc(O)cc6OC[C@H]5c5ccccc5)cc3)C4)CC2)C(=O)N1
C49H52N4O6
792.977000
CMWAKGDTWQNPJP-JFHJMZQNSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97123
Local ready
Direct docking supported
E3L004346
BDB004346
BDBM97124
O=C1CC[C@@H](N2Cc3c(ccc4c3OCC43CCN(CC4CCC5(CC4)CN(c4ccc([C@H]6c7ccc(O)cc7OC[C@H]6c6ccccc6)cc4)C5)CC3)C2=O)C(=O)N1
C49H52N4O6
792.977000
BPZMDXPICADHQA-WXDPHDKQSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97124
Local ready
Direct docking supported
E3L004347
BDB004347
BDBM97125
O=C1CC[C@@H](N2Cc3c(ccc4c3OC[C@@H]3CN(CC5COC6(CCN(c7ccc([C@H]8c9ccc(O)cc9OC[C@H]8c8ccccc8)cc7F)CC6)C5)CCN43)C2=O)C(=O)N1
C48H50FN5O7
827.954000
SSDFPGXZLUALMG-HWYOMGLQSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97125
Local ready
Direct docking supported
E3L004348
BDB004348
BDBM97126
O=C1CCC(Nc2ccc(C34CCN(CC5COC6(CCN(c7ccc([C@H]8c9ccc(O)cc9OC[C@H]8c8ccccc8)cc7F)CC6)C5)CC3C4(F)F)cc2)C(=O)N1
C47H49F3N4O5
806.926000
PCPLPJSUDQZZKV-RMHJHQCHSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97126
Local ready
Direct docking supported
E3L004349
BDB004349
BDBM97127
O=C1CC[C@H](N2Cc3c(ccc4c3OC[C@H]3CN(C[C@@H]5COC6(CCN(c7ccc([C@@H]8c9ccc(O)cc9OC[C@@H]8c8ccccc8)cc7F)CC6)C5)CCN43)C2=O)C(=O)N1
C48H50FN5O7
827.954000
SSDFPGXZLUALMG-QTQBPFRSSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97127
Local ready
Direct docking supported
E3L004350
BDB004350
BDBM97128
O=C1CC[C@@H](N2Cc3c(ccc4c3OC[C@@H]3CN(CC5COC6(CCN(c7ccc([C@@H]8c9ccc(O)cc9OC[C@@H]8c8ccccc8)cc7F)CC6)C5)CCN43)C2=O)C(=O)N1
C48H50FN5O7
827.954000
SSDFPGXZLUALMG-MLERUBJJSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97128
Local ready
Direct docking supported
E3L004351
BDB004351
BDBM97129
O=C1CCC(Nc2ccc(C34CCN(CC5COC6(CCN(c7ccc([C@@H]8c9ccc(O)cc9OC[C@@H]8c8ccccc8)cc7F)CC6)C5)CC3C4(F)F)cc2)C(=O)N1
C47H49F3N4O5
806.926000
PCPLPJSUDQZZKV-HSZZAMHWSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97129
Local ready
Direct docking supported
E3L004352
BDB004352
BDBM97130
O=C1CC[C@@H](N2Cc3cc4c(cc3C2=O)OC[C@H]2CN(CC3COC5(CCN(c6ccc([C@H]7c8ccc(O)cc8OC[C@H]7c7ccccc7)cc6F)CC5)C3)CCN42)C(=O)N1
C48H50FN5O7
827.954000
YSYNVCGWDVPFCV-NHWXWDGNSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97130
Local ready
Direct docking supported
E3L004353
BDB004353
BDBM97131
O=C1CC[C@H](N2Cc3cc4c(cc3C2)N2CCN(CC3COC5(CCN(c6ccc([C@H]7c8ccc(O)cc8OC[C@H]7c7ccccc7)cc6F)CC5)C3)C[C@H]2CO4)C(=O)N1
C48H52FN5O6
813.971000
WHMXQPDCLNVNDS-UGHUSWPTSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97131
Local ready
Direct docking supported
E3L004354
BDB004354
BDBM97132
O=C1CC[C@@H](Nc2ccc(C3CCN(C[C@@H]4COC5(CCN(c6ccc([C@H]7c8ccc(O)cc8OC[C@H]7c7ccccc7)cc6)CC5)C4)CC3)c(F)c2)C(=O)N1
C46H51FN4O5
758.935000
SCTCXOJSOHBDIH-LRMBOURGSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97132
Local ready
Direct docking supported
E3L004355
BDB004355
BDBM97133
O=C1CC[C@@H](Nc2ccc(C3CCN(C[C@H]4COC5(CCN(c6ccc([C@@H]7c8ccc(O)cc8OC[C@@H]7c7ccccc7)cc6)CC5)C4)CC3)c(F)c2)C(=O)N1
C46H51FN4O5
758.935000
SCTCXOJSOHBDIH-TXGROREDSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97133
Local ready
Direct docking supported
E3L004356
BDB004356
BDBM97134
O=C1CC[C@@H](Nc2ccc(C3CCN(C[C@H]4COC5(CCN(c6ccc([C@H]7c8ccc(O)cc8OC[C@H]7c7ccccc7)cc6)CC5)C4)CC3)c(F)c2)C(=O)N1
C46H51FN4O5
758.935000
SCTCXOJSOHBDIH-CJVMMOKMSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM97134
Local ready
Direct docking supported
E3L004357
BDB004357
BDBM97135
O=C1CC[C@@H](Nc2ccc(C3CCN(C[C@@H]4COC5(CCN(c6ccc([C@@H]7c8ccc(O)cc8OC[C@@H]7c7ccccc7)cc6)CC5)C4)CC3)c(F)c2)C(=O)N1
C46H51FN4O5
758.935000
SCTCXOJSOHBDIH-NBZVTWQQSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM97135; PubChem:CID178289736
Local ready
Direct docking supported
E3L004358
BDB004358
BDBM97555
CC(C)N1CCN(Cc2ccc3c(c2)-c2n[nH]c(=O)c4cccc(c24)O3)CC1
C22H24N4O2
376.460000
CDIRTVSDQUAEOU-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM97555; PubChem:CID11349384
Local ready
Direct docking supported
E3L004359
BDB004359
BDBM97556
COCCN1CCN(Cc2ccc3c(c2)-c2n[nH]c(=O)c4cccc(c24)O3)CC1
C22H24N4O3
392.459000
QAVOZOQGAIMEKT-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM97556; PubChem:CID11338344
Local ready
Direct docking supported
E3L004360
BDB004360
BDBM97557
O=c1[nH]nc2c3c(cccc13)Oc1ccc(CN3CCN(c4ncccn4)CC3)cc1-2
C23H20N6O2
412.453000
CSHNTDMZZIAXST-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM97557; PubChem:CID11154155
Local ready
Direct docking supported