E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L004401
BDB004401
ME0328
C[C@H](NC(=O)CCc1nc2ccccc2c(=O)[nH]1)c1ccccc1
C19H19N3O2
321.380000
QIHBWVVVRYYYRO-ZDUSSCGKSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM103558; PubChem:CID135566764
Local ready
Direct docking supported
E3L004402
BDB004402
4HQ derivative 4
Cc1nc(C(=O)NCC(=O)O)c(O)c2ccccc12
C13H12N2O4
260.249000
AWPFDEKASBPACV-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM103842; PubChem:CID11857407
Local ready
Direct docking supported
E3L004403
BDB004403
4HQ derivative 6
O=C(O)CNC(=O)c1nc(Cc2ccccc2)c2ccccc2c1O
C19H16N2O4
336.347000
PKMLICBZRGTSJH-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM103843; PubChem:CID72699308
Local ready
Direct docking supported
E3L004404
BDB004404
4HQ derivative 7
C=CCc1nc(C(=O)NCC(=O)O)c(O)c2ccccc12
C15H14N2O4
286.287000
ZAOVMTNYAPSHFW-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM103844; PubChem:CID72699309
Local ready
Direct docking supported
E3L004405
BDB004405
4HQ derivative 8
CCCCCCCc1nc(C(=O)NCC(=O)O)c(O)c2ccccc12
C19H24N2O4
344.411000
VDEUJVUTGALZBR-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM103845; PubChem:CID72699310
Local ready
Direct docking supported
E3L004406
BDB004406
4HQ derivative 9
O=C(O)CNC(=O)c1nc(Cc2ccccc2)c2ccc(Br)cc2c1O
C19H15BrN2O4
415.243000
HULTUDXQDLVDBE-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM103846; PubChem:CID72699311
Local ready
Direct docking supported
E3L004407
BDB004407
BDBM104065
CC(Sc1nc2c(cnn2-c2cccc(Cl)c2)c(=O)[nH]1)C(N)=O
C14H12ClN5O2S
349.803000
NASYEGAVCTZSDO-UHFFFAOYSA-N Q92630 Dual specificity tyrosine-phosphorylation-regulated kinase 2
BindingDB, PubChem
BindingDB:BDBM104065; PubChem:CID135398509
Local ready
Direct docking supported
E3L004408
BDB004408
BDBM104963
O=C(NOC[C@H](O)CO)c1ccc(F)c(F)c1Nc1ccc(I)cc1F
C16H14F3IN2O4
482.196000
SUDAHWBOROXANE-SECBINFHSA-N Q13233 Mitogen-activated protein kinase kinase kinase 1
BindingDB, PubChem
BindingDB:BDBM104963; PubChem:CID9826528
Local ready
Direct docking supported
E3L004409
BDB004409
BDBM106152
CN1C(=O)c2ccccc2N(C)c2nc(Nc3ccc(S(N)(=O)=O)cc3)ccc21
C20H19N5O3S
409.471000
RCVIFGTXCWQDHC-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM106152; PubChem:CID118279322
Local ready
Direct docking supported
E3L004410
BDB004410
Lgh-447
C[C@@H]1C[C@H](N)C[C@H](c2ccncc2NC(=O)c2ccc(F)c(-c3c(F)cccc3F)n2)C1
C24H23F3N4O
440.469000
VRQXRVAKPDCRCI-ZNMIVQPWSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM106870; PubChem:CID44814409
Local ready
Direct docking supported
E3L004411
BDB004411
BDBM107057
Cc1cc(Nc2nc(Nc3ccccc3S(=O)(=O)C(C)C)c3c(C)[nH]nc3n2)c(OC(C)C)cc1C1CCN(C)CC1
C31H41N7O3S
591.782000
AFTBNZZMNUUEFO-UHFFFAOYSA-N Q9HC35 ALK tyrosine kinase receptor
BindingDB, PubChem
BindingDB:BDBM107057; PubChem:CID44467827
Local ready
Direct docking supported
E3L004412
BDB004412
US8598206, Table 6, 5
CC(=O)N1CCC(CC[C@@H](NS(=O)(=O)Cc2ccccc2)C(=O)N[C@@H](CCC2CCNCC2)C(=O)NCc2ccc(C(=N)N)cc2)CC1
C35H51N7O5S
681.904000
XATHBXYKVIAZOR-AJQTZOPKSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM108096; PubChem:CID53345860
Local ready
Direct docking supported
E3L004413
BDB004413
US8598206, Table 6, 7
N=C(N)c1ccc(CNC(=O)[C@H](CCC2CCNCC2)NC(=O)[C@@H](CCC2CCN(C(=O)C3CC3)CC2)NS(=O)(=O)Cc2ccccc2)cc1
C37H53N7O5S
707.942000
DIFGLRSYVDIDJS-JHOUSYSJSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM108098; PubChem:CID53345968
Local ready
Direct docking supported
E3L004414
BDB004414
US8598206, Table 6, 8
CCC(=O)N1CCC(CC[C@@H](NS(=O)(=O)Cc2ccccc2)C(=O)N[C@@H](CCC2CCNCC2)C(=O)NCc2ccc(C(=N)N)cc2)CC1
C36H53N7O5S
695.931000
LWFLIRIWEPBXFX-AJQTZOPKSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM108099; PubChem:CID53346082
Local ready
Direct docking supported
E3L004415
BDB004415
US8598206, Table 6, 11
COCC(=O)N1CCC(CC[C@@H](NS(=O)(=O)Cc2ccccc2)C(=O)N[C@@H](CCC2CCNCC2)C(=O)NCc2ccc(C(=N)N)cc2)CC1
C36H53N7O6S
711.930000
DTIUMOLBWQXRPH-AJQTZOPKSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM108102; PubChem:CID53345862
Local ready
Direct docking supported
E3L004416
BDB004416
US8598206, Table 6, 13
CN(C)C(=O)N1CCC(CC[C@@H](NS(=O)(=O)Cc2ccccc2)C(=O)N[C@@H](CCC2CCNCC2)C(=O)NCc2ccc(C(=N)N)cc2)CC1
C36H54N8O5S
710.946000
WYOJURVOHOBMRY-AJQTZOPKSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM108104; PubChem:CID53345967
Local ready
Direct docking supported
E3L004417
BDB004417
US8598206, Table 6, 14
CNC(=O)N1CCC(CC[C@@H](NS(=O)(=O)Cc2ccccc2)C(=O)N[C@@H](CCC2CCNCC2)C(=O)NCc2ccc(C(=N)N)cc2)CC1
C35H52N8O5S
696.919000
OGCGKERBEQPTBU-IOWSJCHKSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM108105; PubChem:CID53345863
Local ready
Direct docking supported
E3L004418
BDB004418
US8598206, Table 6, 15
CCCC(=O)N1CCC(CC[C@@H](NS(=O)(=O)Cc2ccccc2)C(=O)N[C@@H](CCC2CCNCC2)C(=O)NCc2ccc(C(=N)N)cc2)CC1
C37H55N7O5S
709.958000
GWZGMZVWURNLOZ-JHOUSYSJSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM108106; PubChem:CID53345969
Local ready
Direct docking supported
E3L004419
BDB004419
US8598206, Table 6, 16
COC(=O)N1CCC(CC[C@@H](NS(=O)(=O)Cc2ccccc2)C(=O)N[C@@H](CCC2CCNCC2)C(=O)NCc2ccc(C(=N)N)cc2)CC1
C35H51N7O6S
697.903000
ZTXALZIIFRKUGE-IOWSJCHKSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM108107; PubChem:CID53345861
Local ready
Direct docking supported
E3L004420
BDB004420
BDBM108108
N=C(N)c1ccc(CNC(=O)[C@H](CCC2CCNCC2)NC(=O)[C@@H](CCCc2cc[n+]([O-])cc2)NS(=O)(=O)Cc2ccccc2)cc1
C34H45N7O5S
663.845000
BVZHCUOVJATBQP-IOWSJCHKSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM108108; PubChem:CID53346182
Local ready
Direct docking supported