E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L055901
BDB055901
BDBM50432755
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)NCCCCCCCCNC(=O)N2CC[C@H]3CC[C@@H](C(=O)NC(c4ccccc4)c4ccccc4)N3C(=O)[C@@H](NC(=O)[C@H](C)NC)C2)CC[C@H]2CC[C@@H](C(=O)NC(c3ccccc3)c3ccccc3)N2C1=O
C64H86N12O8
1151.468000
HLFSVLWTUQVBNO-YBEGZINPSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 2, Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM50432755
Local ready
Direct docking supported
E3L055902
BDB055902
BDBM50432756
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)NCCCCNC(=O)N2CC[C@H]3CC[C@@H](C(=O)NC(c4ccccc4)c4ccccc4)N3C(=O)[C@@H](NC(=O)[C@H](C)NC)C2)CC[C@H]2CC[C@@H](C(=O)NC(c3ccccc3)c3ccccc3)N2C1=O
C60H78N12O8
1095.360000
IKAZUBYOAREMAR-DSNABAJCSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM50432756
Local ready
Direct docking supported
E3L055903
BDB055903
BDBM50432757
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)N2CCN(C(=O)N3CC[C@H]4CC[C@@H](C(=O)NC(c5ccccc5)c5ccccc5)N4C(=O)[C@@H](NC(=O)[C@H](C)NC)C3)CC2)CC[C@H]2CC[C@@H](C(=O)NC(c3ccccc3)c3ccccc3)N2C1=O
C60H76N12O8
1093.344000
ULKJATGOQUMNBW-DSNABAJCSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM50432757
Local ready
Direct docking supported
E3L055904
BDB055904
BDBM50432758
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)N[C@H]2CC[C@H](NC(=O)N3CC[C@H]4CC[C@@H](C(=O)NC(c5ccccc5)c5ccccc5)N4C(=O)[C@@H](NC(=O)[C@H](C)NC)C3)CC2)CC[C@H]2CC[C@@H](C(=O)NC(c3ccccc3)c3ccccc3)N2C1=O
C62H80N12O8
1121.398000
ZODHCOWVJNCOFB-JOAOFPHVSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM50432758
Local ready
Direct docking supported
E3L055905
BDB055905
BDBM50432759
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)Nc2ccc(Oc3ccc(NC(=O)N4CC[C@H]5CC[C@@H](C(=O)NC(c6ccccc6)c6ccccc6)N5C(=O)[C@@H](NC(=O)[C@H](C)NC)C4)cc3)cc2)CC[C@H]2CC[C@@H](C(=O)NC(c3ccccc3)c3ccccc3)N2C1=O
C68H78N12O9
1207.447000
WQKJLURQKWFJSF-HDPQYBQWSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM50432759
Local ready
Direct docking supported
E3L055906
BDB055906
BDBM50432760
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)Nc2ccc(Cc3ccc(NC(=O)N4CC[C@H]5CC[C@@H](C(=O)NC(c6ccccc6)c6ccccc6)N5C(=O)[C@@H](NC(=O)[C@H](C)NC)C4)cc3)cc2)CC[C@H]2CC[C@@H](C(=O)NC(c3ccccc3)c3ccccc3)N2C1=O
C69H80N12O8
1205.475000
DHBOEJJPDGNOTI-FIMSWPKWSA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2, Baculoviral IAP repeat-containing protein 3
BindingDB
BindingDB:BDBM50432760
Local ready
Direct docking supported
E3L055907
BDB055907
BDBM50432761
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)NCc2cccc(CNC(=O)N3CC[C@H]4CC[C@@H](C(=O)NC(c5ccccc5)c5ccccc5)N4C(=O)[C@@H](NC(=O)[C@H](C)NC)C3)c2)CC[C@H]2CC[C@@H](C(=O)NC(c3ccccc3)c3ccccc3)N2C1=O
C64H78N12O8
1143.404000
ISELJTJQCKSQCK-SQHFRGFLSA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3, Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM50432761
Local ready
Direct docking supported
E3L055908
BDB055908
BDBM50432762
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)Nc2cccc(NC(=O)N3CC[C@H]4CC[C@@H](C(=O)NC(c5ccccc5)c5ccccc5)N4C(=O)[C@@H](NC(=O)[C@H](C)NC)C3)c2)CC[C@H]2CC[C@@H](C(=O)NC(c3ccccc3)c3ccccc3)N2C1=O
C62H74N12O8
1115.350000
LOYSOJNWDYWXHG-CEQBHCGOSA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3, Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM50432762
Local ready
Direct docking supported
E3L055909
BDB055909
BDBM50432763
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)Nc2ccc(NC(=O)N3CC[C@H]4CC[C@@H](C(=O)NC(c5ccccc5)c5ccccc5)N4C(=O)[C@@H](NC(=O)[C@H](C)NC)C3)cc2)CC[C@H]2CC[C@@H](C(=O)NC(c3ccccc3)c3ccccc3)N2C1=O
C62H74N12O8
1115.350000
SGWUDLNUDPDRSR-CEQBHCGOSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM50432763
Local ready
Direct docking supported
E3L055910
BDB055910
BDBM50433095
O=c1[nH]c(CCCN2CCC(c3ccc(Cl)cc3)CC2)nc2ccccc12
C22H24ClN3O
381.907000
BZWKNGNQRBBNAW-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50433095; PubChem:CID136244542
Local ready
Direct docking supported
E3L055911
BDB055911
BDBM50433096
O=c1[nH]c(CCCN2CCN(c3cccc(Cl)c3)CC2)nc2ccccc12
C21H23ClN4O
382.895000
PKIGUBXVWVZBFX-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50433096; PubChem:CID136254399
Local ready
Direct docking supported
E3L055912
BDB055912
BDBM50433097
O=c1[nH]c(CCCN2CCN(c3ccc(F)cc3)CC2)nc2ccccc12
C21H23FN4O
366.440000
VKRLDSMSRYWBJD-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50433097; PubChem:CID136240852
Local ready
Direct docking supported
E3L055913
BDB055913
BDBM50433098
COc1ccccc1N1CCN(CCCc2nc3ccccc3c(=O)[nH]2)CC1
C22H26N4O2
378.476000
MQPUPFPSPOAIFR-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50433098; PubChem:CID136239430
Local ready
Direct docking supported
E3L055914
BDB055914
4-Quinazolone, 2-butyl
CCCCc1nc2ccccc2c(=O)[nH]1
C12H14N2O
202.257000
WBFIFMJPHUALRV-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50433099; PubChem:CID135512543
Local ready
Direct docking supported
E3L055915
BDB055915
BDBM50433560
CC(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CO)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@H](C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@]1(C)CCCCCC/C=C\CCC[C@@](C)(C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CC(N)=O)C(N)=O)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCCCN=C(N)N)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(N)=O)NC1=O)[C@@H](C)O
C99H155N27O25
2123.493000
KGIZCIZPMJHHBJ-LPZWIQKBSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50433560
Local ready
Direct docking supported
E3L055916
BDB055916
BDBM50433561
CC(C)(C)C[C@@H]1N[C@@H](C(=O)N[C@H]2CC[C@H](O)CC2)[C@H](c2cccc(Cl)c2F)[C@]12C(=O)Nc1cc(Cl)ccc12
C29H34Cl2FN3O3
562.513000
IDKAKZRYYDCJDU-HBMMIIHUSA-N O15151, Q00987 E3 ubiquitin-protein ligase Mdm2, Protein Mdm4
BindingDB
BindingDB:BDBM50433561
Local ready
Direct docking supported
E3L055917
BDB055917
BDBM50433562
COc1ccc(C2=NC(c3ccc(Cl)cc3)C(c3ccc(Cl)cc3)N2C(=O)N2CCN(C(C)=O)CC2)c(OC(C)C)c1
C32H34Cl2N4O4
609.554000
IYDMGGPKSVWQRT-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50433562; PubChem:CID10008863
Local ready
Direct docking supported
E3L055918
BDB055918
H-Phe-Met-Asp-Tyr-Trp-Glu-Gly-Leu-NH2
CSCC[C@H](NC(=O)[C@@H](N)Cc1ccccc1)C(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](Cc1ccc(O)cc1)C(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(=O)N[C@@H](CCC(=O)O)C(=O)NCC(=O)N[C@@H](CC(C)C)C(N)=O
C51H66N10O13S
1059.213000
QWTNEVFPUSLSCU-FTZOFIEWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50433563; PubChem:CID73356477
Local ready
Direct docking supported
E3L055919
BDB055919
BDBM50433564
CSCC[C@H](NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](CCCN=C(N)N)NC(=O)[C@@H]1CCCN1C(=O)[C@H](CCSC)NC(C)=O)C(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](Cc1ccc(O)cc1)C(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(=O)N[C@@H](CCC(=O)O)C(=O)NCC(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CC(N)=O)C(N)=O
C73H102N18O19S2
1599.860000
SSPKZXZLNSQEHB-FCDAVOGYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50433564
Local ready
Direct docking supported
E3L055920
BDB055920
BDBM50433629
O=C(Nc1ccc(Nc2ccnc3[nH]c(=O)c4ccccc4c23)cc1)c1ccccc1
C25H18N4O2
406.445000
XLSPYLMTRXPYKY-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50433629; PubChem:CID44189332
Local ready
Direct docking supported