E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L055941
BDB055941
1-amino-5H-benzo[c][1,8]naphthyridin-6-one
Nc1ccnc2[nH]c(=O)c3ccccc3c12
C12H9N3O
211.224000
CHZAQVIQFADGJA-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50433650; PubChem:CID68650098
Local ready
Direct docking supported
E3L055942
BDB055942
1-Chlorobenzo[C][1,8]naphthyridin-6(5H)-one
O=c1[nH]c2nccc(Cl)c2c2ccccc12
C12H7ClN2O
230.654000
CJXHWGOMJRWEGM-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50433651; PubChem:CID58168008
Local ready
Direct docking supported
E3L055943
BDB055943
BDBM50433652
O=C(Nc1ccc(Nc2ccnc3[nH]c(=O)c4ccccc4c23)cc1)c1cccc(C(F)(F)F)c1F
C26H16F4N4O2
492.432000
WPASUZBJIGBQSX-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50433652; PubChem:CID58168169
Local ready
Direct docking supported
E3L055944
BDB055944
BDBM50433653
O=C(Nc1ccc(Nc2ccnc3[nH]c(=O)c4ccccc4c23)cc1)c1cc(F)cc(C(F)(F)F)c1
C26H16F4N4O2
492.432000
ZJWOUSIEGRLZGU-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50433653; PubChem:CID44207551
Local ready
Direct docking supported
E3L055945
BDB055945
BDBM50433654
O=C(Nc1ccc(Nc2ccnc3[nH]c(=O)c4ccccc4c23)cc1)c1ccc(C(F)(F)F)cc1F
C26H16F4N4O2
492.432000
ATLTVHRPWMFWKI-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50433654; PubChem:CID44207552
Local ready
Direct docking supported
E3L055946
BDB055946
7-(2-Fluorophenyl)-4-Methylquinolin-2(1h)-One
Cc1cc(=O)[nH]c2cc(-c3ccccc3F)ccc12
C16H12FNO
253.276000
PPOQMSJVMJCEAI-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50434127; PubChem:CID71576800
Local ready
Direct docking supported
E3L055947
BDB055947
BDBM50434155
CC1(C)OC(=O)N([C@H]2CC[C@H](n3c(=O)[nH]c4c(F)c(C#N)ccc43)CC2)[C@H]1c1ccccc1
C25H25FN4O3
448.498000
GTRSBOPVOQICBF-SPEDKVCISA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB
BindingDB:BDBM50434155
Local ready
Direct docking supported
E3L055948
BDB055948
BDBM50434156
CC1(C)OC(=O)N([C@H]2CC[C@H](n3c(=O)[nH]c4cc(C#N)c(F)cc43)CC2)[C@H]1c1ccccc1
C25H25FN4O3
448.498000
KOIGSPGBVAOKRC-SPEDKVCISA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB
BindingDB:BDBM50434156
Local ready
Direct docking supported
E3L055949
BDB055949
BDBM50434157
CC1(C)OC(=O)N(c2ccc(C(=O)Nc3cccc4cccnc34)cc2)[C@H]1c1ccccc1
C27H23N3O3
437.499000
LUYWAGVRXKSNLL-DEOSSOPVSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50434157; PubChem:CID71464718
Local ready
Direct docking supported
E3L055950
BDB055950
BDBM50434158
CC1(C)OC(=O)N([C@H]2CC[C@H](NC(=O)c3ccnc4cc(F)cnc34)CC2)[C@H]1c1ccccc1
C26H27FN4O3
462.525000
NKPDQKILCAOJCZ-YDHSSHFGSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB
BindingDB:BDBM50434158
Local ready
Direct docking supported
E3L055951
BDB055951
BDBM50434280
CCOc1cc(C(C)(C)C)ccc1C1=N[C@@](C)(c2ccc(Cl)cc2)[C@@](C)(c2ccc(Cl)cc2)N1C(=O)N1CCNC(=O)C1
C34H38Cl2N4O3
621.609000
ZZRODNWWALHZAJ-SZAHLOSFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50434280; PubChem:CID71655426
Local ready
Direct docking supported
E3L055952
BDB055952
BDBM50434281
CCOc1cc(C(C)(C)C)ccc1C1=N[C@@](C)(c2ccc(Cl)cc2)[C@@H](c2ccc(Cl)cc2)N1C(=O)N1CCN(CCCS(C)(=O)=O)CC1
C37H46Cl2N4O4S
713.772000
HJAIBUOZTNJPKT-GOJCVTOHSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50434281; PubChem:CID58894294
Local ready
Direct docking supported
E3L055953
BDB055953
BDBM50434282
CCOc1cc(C(C)(C)C)ccc1C1=N[C@@](CC)(c2ccc(Cl)cc2)[C@@](CC)(c2ccc(Cl)cc2)N1C(=O)N1CCN(CCCS(C)(=O)=O)CC1
C40H52Cl2N4O4S
755.853000
JSZMEICPYDYNJQ-IOLBBIBUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50434282; PubChem:CID59595061
Local ready
Direct docking supported
E3L055954
BDB055954
BDBM50434283
CCOc1cc(C(C)(C)C)ccc1C1=N[C@@](C)(c2ccc(Cl)cc2)[C@@](C)(c2ccc(Cl)cc2)N1C(=O)N1CCN(CC(=O)N2CCOCC2)CC1
C40H49Cl2N5O4
734.769000
DJZBZZRLUQDRII-IOLBBIBUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50434283
Local ready
Direct docking supported
E3L055955
BDB055955
BDBM50434284
CCOc1cc(C(C)(C)C)ccc1C1=N[C@@](C)(c2ccc(Cl)cc2)[C@@](C)(c2ccc(Cl)cc2)N1C(=O)N1CCN(CC(=O)N2CCCC2)CC1
C40H49Cl2N5O3
718.770000
DVHSHICVMASNND-IOLBBIBUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50434284
Local ready
Direct docking supported
E3L055956
BDB055956
BDBM50434285
CCOc1cc(C(C)(C)C)ccc1C1=N[C@@](C)(c2ccc(Cl)cc2)[C@@](C)(c2ccc(Cl)cc2)N1C(=O)N1CCN(CCNC(C)=O)CC1
C38H47Cl2N5O3
692.732000
WOJXNSCIVSUSTO-QPPIDDCLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50434285; PubChem:CID17754844
Local ready
Direct docking supported
E3L055957
BDB055957
BDBM50434286
CCOc1cc(C(C)(C)C)ccc1C1=N[C@@](C)(c2ccc(Cl)cc2)[C@@](C)(c2ccc(Cl)cc2)N1C(=O)N1CCN(CCNS(C)(=O)=O)CC1
C37H47Cl2N5O4S
728.787000
RLVHIMZOZMLGIX-PQQNNWGCSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50434286
Local ready
Direct docking supported
E3L055958
BDB055958
BDBM50434288
CCOc1cc(C(C)(C)C)ccc1C1=N[C@@](C)(c2ccc(Cl)cc2)[C@@](C)(c2ccc(Cl)cc2)N1C(=O)N1CCN(CCO)CC1
C36H44Cl2N4O3
651.679000
QEHAAELBCKBEBS-MPQUPPDSSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50434288; PubChem:CID17754846
Local ready
Direct docking supported
E3L055959
BDB055959
BDBM50434289
CCOc1cc(C(C)(C)C)ccc1C1=N[C@@](C)(c2ccc(Cl)cc2)[C@@](C)(c2ccc(Cl)cc2)N1C(=O)N1CCN(CCC(F)(F)F)CC1
C37H43Cl2F3N4O2
703.677000
MVGHTOGJZPPSRC-MPQUPPDSSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50434289; PubChem:CID17754801
Local ready
Direct docking supported
E3L055960
BDB055960
BDBM50434290
CCOc1cc(C(C)(C)C)ccc1C1=N[C@@](C)(c2ccc(Cl)cc2)[C@@](C)(c2ccc(Cl)cc2)N1C(=O)N1CCN(C(C)=O)CC1
C36H42Cl2N4O3
649.663000
OHBOYVVVTREVDA-MPQUPPDSSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50434290; PubChem:CID17754588
Local ready
Direct docking supported