E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L058581
BDB058581
BDBM50513211
CC(C)C1=C(C(=O)N2C[C@H](F)C[C@H]2C(=O)N2CC3(CC3)NC[C@@H]2C)SC2=N[C@@](C)(c3ccc(Cl)cc3)[C@@H](c3ccc(Cl)c(F)c3)N21
C34H37Cl2F2N5O2S
688.672000
CVLAFGRKHWIHOQ-ZAUHVZEBSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50513211
Local ready
Direct docking supported
E3L058582
BDB058582
Kdm4-IN-2
O=c1[nH]cnc2c(-n3cc(CCN4CCC5(CCc6ccccc65)CC4)cn3)nccc12
C25H26N6O
426.524000
AVFIHINZEZRGBL-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513343; PubChem:CID138393336
Local ready
Direct docking supported
E3L058583
BDB058583
BDBM50513344
O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5cccc(F)c5)CC4)cn3)nccc12
C23H23FN6O
418.476000
FJLXFYHDLHZPQK-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513344; PubChem:CID155519111
Local ready
Direct docking supported
E3L058584
BDB058584
BDBM50513345
CN(C)CCc1cccc(C2CCN(CCc3cnn(-c4nccc5c(=O)[nH]cnc45)c3)CC2)c1
C27H33N7O
471.609000
VQBICUVJQVNKBH-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513345; PubChem:CID138753211
Local ready
Direct docking supported
E3L058585
BDB058585
BDBM50513346
O=c1[nH]cnc2c(-n3cc(C4CCN(CC5CCC5)CC4)cn3)nccc12
C20H24N6O
364.453000
FQYVJQRHNLIPIK-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513346; PubChem:CID138753212
Local ready
Direct docking supported
E3L058586
BDB058586
BDBM50513347
O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5cc(CCN6CCOCC6)cc(C(F)(F)F)c5)CC4)cn3)nccc12
C30H34F3N7O2
581.643000
OFBASLHLTNSWOV-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513347; PubChem:CID155510449
Local ready
Direct docking supported
E3L058587
BDB058587
BDBM50513348
CN(C)CCc1ccc(C2CCN(CCc3cnn(-c4nccc5c(=O)[nH]cnc45)c3)CC2)cc1
C27H33N7O
471.609000
YSKANQRCYYKDSC-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513348; PubChem:CID138393334
Local ready
Direct docking supported
E3L058588
BDB058588
BDBM50513349
O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5cccc(-c6ccccn6)c5)CC4)cn3)nccc12
C28H27N7O
477.572000
AYSIHEFQSAIYGY-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513349; PubChem:CID155558717
Local ready
Direct docking supported
E3L058589
BDB058589
BDBM50513350
O=c1[nH]cnc2c(-n3cc(C4CCN(CC5CC5)CC4)cn3)nccc12
C19H22N6O
350.426000
XIMIJJARGYSDBU-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513350; PubChem:CID155546359
Local ready
Direct docking supported
E3L058590
BDB058590
BDBM50513351
O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5cc(CN6CCCC6)cc(C(F)(F)F)c5)CC4)cn3)nccc12
C29H32F3N7O
551.617000
LAGKZFNQXIBSDJ-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513351; PubChem:CID155540290
Local ready
Direct docking supported
E3L058591
BDB058591
BDBM50513352
O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5cccc(CN6CCCC6)c5)CC4)cn3)nccc12
C28H33N7O
483.620000
BSWSHYUVWCPTHU-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513352; PubChem:CID155569285
Local ready
Direct docking supported
E3L058592
BDB058592
BDBM50513353
CC(C)c1cccc(C2CCN(CCc3cnn(-c4nccc5c(=O)[nH]cnc45)c3)CC2)c1
C26H30N6O
442.567000
RRZDZCQQAMZZMU-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513353; PubChem:CID155538517
Local ready
Direct docking supported
E3L058593
BDB058593
BDBM50513354
O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5cccc(-c6cncnc6)c5)CC4)cn3)nccc12
C27H26N8O
478.560000
CYMWJZQYPTVZRX-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513354; PubChem:CID155557731
Local ready
Direct docking supported
E3L058594
BDB058594
BDBM50513355
O=C1CCCN1c1ccc(C2CCN(CCc3cnn(-c4nccc5c(=O)[nH]cnc45)c3)CC2)cc1
C27H29N7O2
483.576000
OTYMAMBJVVRSCZ-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513355; PubChem:CID155543678
Local ready
Direct docking supported
E3L058595
BDB058595
BDBM50513356
CN1CCC(c2cnn(-c3nccc4c(=O)[nH]cnc34)c2)CC1
C16H18N6O
310.361000
WDLBUONJQGHSKT-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513356; PubChem:CID138393333
Local ready
Direct docking supported
E3L058596
BDB058596
BDBM50513357
O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5ccc(-c6ccncc6)cc5)CC4)cn3)nccc12
C28H27N7O
477.572000
QOMJHYUHYMCFHT-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513357; PubChem:CID155567831
Local ready
Direct docking supported
E3L058597
BDB058597
BDBM50513358
CC(C)CN1CCC(c2cnn(-c3nccc4c(=O)[nH]cnc34)c2)CC1
C19H24N6O
352.442000
CDISMPCRDDJEHH-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513358; PubChem:CID155518054
Local ready
Direct docking supported
E3L058598
BDB058598
BDBM50513359
CC(C)COc1cccc(C2CCN(CCc3cnn(-c4nccc5c(=O)[nH]cnc45)c3)CC2)c1
C27H32N6O2
472.593000
FSICLPHOMOJFQK-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513359; PubChem:CID155536799
Local ready
Direct docking supported
E3L058599
BDB058599
BDBM50513361
O=c1[nH]cnc2c(-n3cc(CCN4CCC(c5cccc(-c6cccnc6)c5)CC4)cn3)nccc12
C28H27N7O
477.572000
OKSIGHDJUXBCLG-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513361; PubChem:CID155560356
Local ready
Direct docking supported
E3L058600
BDB058600
BDBM50513362
CC(C)(C)c1cccc(C2CCN(CCc3cnn(-c4nccc5c(=O)[nH]cnc45)c3)CC2)c1
C27H32N6O
456.594000
RIVJXVMWOIAAEH-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50513362; PubChem:CID155542268
Local ready
Direct docking supported