E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L060581
BDB060581
BDBM50559588
Cc1cc(/C=C2\SC(=O)NC2=O)c(C)n1-c1ccc(-c2ccccc2)cc1
C22H18N2O2S
374.465000
FLXJSXUCSQKTMW-MOSHPQCFSA-N Q07869 Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50559588; PubChem:CID1368479
Local ready
Direct docking supported
E3L060582
BDB060582
BDBM50559764
OC[C@H]1CN(Cc2c[nH]cn2)C[C@@H]1O
C9H15N3O2
197.238000
ZOIAXNQLHHCVAF-APPZFPTMSA-N P29372 DNA-3-methyladenine glycosylase
BindingDB, PubChem
BindingDB:BDBM50559764; PubChem:CID162652841
Local ready
Direct docking supported
E3L060583
BDB060583
BDBM50560174
Cc1cc2c(-c3ccco3)cnc(N[C@@H]3CCN(C)C[C@H]3C(=O)NC3CCCCC3)c2[nH]c1=O
C26H33N5O3
463.582000
NDEORODKVUYMFQ-NHCUHLMSSA-N O15164 Transcription intermediary factor 1-alpha
BindingDB, PubChem
BindingDB:BDBM50560174; PubChem:CID146681130
Local ready
Direct docking supported
E3L060584
BDB060584
BDBM50560704
Cn1cc(-c2ccc3occ(-c4cccc(-c5ccncc5)c4)c3n2)cn1
C22H16N4O
352.397000
HEAGNKNMQVIVMM-UHFFFAOYSA-N Q92630 Dual specificity tyrosine-phosphorylation-regulated kinase 2
BindingDB, PubChem
BindingDB:BDBM50560704; PubChem:CID155891794
Local ready
Direct docking supported
E3L060585
BDB060585
BDBM50560741
Cc1ncsc1-c1ccc([C@H](C)NC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)COCCOCCOCCOCCOCC(=O)N2CC(Nc3cc(C(=O)NC[C@H](O)CN4CCc5ccccc5C4)ncn3)C2)C(C)(C)C)cc1
C55H76N10O12S
1101.338000
XUJMNOQMXWVXQE-STHBVIMFSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB
BindingDB:BDBM50560741
Local ready
Direct docking supported
E3L060586
BDB060586
Negative control for MS4322
Cc1ncsc1-c1ccc([C@H](C)NC(=O)[C@H]2C[C@H](O)CN2C(=O)[C@@H](NC(=O)COCCOCCOCCOCCOCC(=O)N2CC(Nc3cc(C(=O)NC[C@H](O)CN4CCc5ccccc5C4)ncn3)C2)C(C)(C)C)cc1
C55H76N10O12S
1101.338000
XUJMNOQMXWVXQE-KPPAQSJOSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50560742; PubChem:CID162659848
Local ready
Direct docking supported
E3L060587
BDB060587
BDBM50560885
CC(=O)N1CCN([C@H]2CC[C@@H](Nc3ncnc4[nH]cc(C(C)C)c34)CC2)CC1
C21H32N6O
384.528000
ACJQMCQTSXRKNU-CALCHBBNSA-N P51617 Interleukin-1 receptor-associated kinase 1
BindingDB
BindingDB:BDBM50560885
Local ready
Direct docking supported
E3L060588
BDB060588
BDBM50560886
CC(=O)N1CCN([C@H]2CC[C@@H](Nc3ncnn4ccc(C(C)C)c34)CC2)CC1
C21H32N6O
384.528000
FQBRQRVXPUQKLG-HDICACEKSA-N P51617 Interleukin-1 receptor-associated kinase 1
BindingDB
BindingDB:BDBM50560886
Local ready
Direct docking supported
E3L060589
BDB060589
BDBM50560887
CC(C)c1ccn2ncnc(N[C@H]3CC[C@@H](N4CCN(C(=O)CCC(=O)N5CCC(CN6CCN(c7ccc8c(c7)C(=O)N(C7CCC(=O)NC7=O)C8=O)CC6)CC5)CC4)CC3)c12
C46H61N11O6
864.065000
PVLXFMAKABZOPF-YVLRYLSESA-N P51617, Q96SW2 Protein cereblon, Interleukin-1 receptor-associated kinase 1
BindingDB
BindingDB:BDBM50560887
Local ready
Direct docking supported
E3L060590
BDB060590
BDBM50560888
CC(C)c1ccn2ncnc(N[C@H]3CC[C@@H](N4CCN(C(=O)CCC(=O)N5CCC(CCN6CCN(c7ccc8c(c7)C(=O)N(C7CCC(=O)NC7=O)C8=O)CC6)CC5)CC4)CC3)c12
C47H63N11O6
878.092000
ZUODKONSNNHSAJ-AMLBMYBGSA-N P51617, Q96SW2 Interleukin-1 receptor-associated kinase 1, Protein cereblon
BindingDB
BindingDB:BDBM50560888
Local ready
Direct docking supported
E3L060591
BDB060591
BDBM50560889
CC(C)c1ccn2ncnc(N[C@H]3CC[C@@H](N4CCN(C(=O)CCC(=O)N5CCC(CCN6CCN(c7ccc8c(c7)C(=O)N(C7CCC(=O)N(C)C7=O)C8=O)CC6)CC5)CC4)CC3)c12
C48H65N11O6
892.119000
GDDYLBPIGVZFSF-UKMVIOKASA-N P51617, Q96SW2 Protein cereblon, Interleukin-1 receptor-associated kinase 1
BindingDB
BindingDB:BDBM50560889
Local ready
Direct docking supported
E3L060592
BDB060592
BDBM50561318
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](OC(=O)Cc2ccccc2)C(C)(C)C)cc1
C30H35N3O5S
549.693000
QGYKSZSGBAAAIX-ONBPZOJHSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM50561318; PubChem:CID162664558
Local ready
Direct docking supported
E3L060593
BDB060593
BDBM50561527
Nc1nc(N[C@H]2C[C@@H]3CC[C@H]2C3)sc1C(=O)c1ccccc1[N+](=O)[O-]
C17H18N4O3S
358.423000
JRNXAQINDCOHGS-SCVCMEIPSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50561527; PubChem:CID137333456
Local ready
Direct docking supported
E3L060594
BDB060594
BDBM50561804
Nc1ncnc2c1ncn2[C@@H]1O[C@H](CN2CCC(N)CC2)[C@@H](O)[C@H]1O
C15H23N7O3
349.395000
ANWLABNDQPZDDU-SDBHATRESA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50561804; PubChem:CID162655967
Local ready
Direct docking supported
E3L060595
BDB060595
BDBM50561805
Nc1ncnc2c1ncn2[C@@H]1O[C@H](CN2CCCC23CNC3)[C@@H](O)[C@H]1O
C16H23N7O3
361.406000
LWDSCWNNOJAKCH-SDBHATRESA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50561805; PubChem:CID130419221
Local ready
Direct docking supported
E3L060596
BDB060596
BDBM50561806
Nc1ncnc2c1ncn2[C@@H]1O[C@H](CN2CCCC23CCNC3)[C@@H](O)[C@H]1O
C17H25N7O3
375.433000
YOMMNJDRQPKGBA-NNYHISJYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50561806; PubChem:CID130419213
Local ready
Direct docking supported
E3L060597
BDB060597
BDBM50561807
Nc1ncnc2c1ncn2[C@@H]1O[C@H](CN2CCCC23CCNCC3)[C@@H](O)[C@H]1O
C18H27N7O3
389.460000
NBMHRKZWASUUCJ-LSCFUAHRSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50561807; PubChem:CID130418954
Local ready
Direct docking supported
E3L060598
BDB060598
BDBM50561808
Nc1ncnc2c1ncn2[C@@H]1O[C@H](CN2CCC23CNC3)[C@@H](O)[C@H]1O
C15H21N7O3
347.379000
JVWYXERBEOIFLM-IDTAVKCVSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50561808; PubChem:CID130419215
Local ready
Direct docking supported
E3L060599
BDB060599
BDBM50561809
Nc1ncnc2c1ncn2[C@@H]1O[C@H](CN2CCC23CCNCC3)[C@@H](O)[C@H]1O
C17H25N7O3
375.433000
YCKWGYGWVSPDST-XNIJJKJLSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50561809; PubChem:CID130418900
Local ready
Direct docking supported
E3L060600
BDB060600
BDBM50561810
Nc1ncnc2c1ncn2[C@@H]1O[C@H](CN2CCC3(CCNCC3)C2)[C@@H](O)[C@H]1O
C18H27N7O3
389.460000
YWFSUVOUEYQNOY-LSCFUAHRSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50561810; PubChem:CID130418955
Local ready
Direct docking supported