E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L060641
BDB060641
BDBM50562612
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)CCCNC(=O)c2ccc(-c3cnc(NCc4ccco4)n4cnnc34)cc2)C(C)(C)C)cc1
C43H48N10O6S
832.988000
PPNNFXIBKLCMTI-WXEAQWFJSA-N O75530 Polycomb protein EED
BindingDB
BindingDB:BDBM50562612
Local ready
Direct docking supported
E3L060642
BDB060642
BDBM50562646
NC(=O)c1cccc2cc(C(=O)N3CCN(c4nc(-c5cnc(N)cc5C(F)(F)F)nc(N5CCOCC5)n4)CC3)oc12
C27H26F3N9O4
597.558000
NBUIWUDKADDAKC-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50562646; PubChem:CID138667945
Local ready
Direct docking supported
E3L060643
BDB060643
BDBM50562647
NC(=O)c1cccc2cc(C(=O)N3CCN(c4nc(-c5ccc(N)nc5)nc(N5CCOCC5)n4)CC3)oc12
C26H27N9O4
529.561000
XDVDXJJYSVRAJX-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50562647; PubChem:CID138667943
Local ready
Direct docking supported
E3L060644
BDB060644
BDBM50562648
NC(=O)c1cccc2cc(C(=O)N3CCN(c4nc(-c5cnc(N)nc5)nc(N5CCOCC5)n4)CC3)oc12
C25H26N10O4
530.549000
ORFAAEFWFKRACI-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50562648; PubChem:CID138668243
Local ready
Direct docking supported
E3L060645
BDB060645
BDBM50562649
NC(=O)c1cccc2cc(C(=O)N3CCN(c4nc(-c5cnc(NC(=O)CN6CCOCC6)cc5C(F)(F)F)nc(N5CCOCC5)n4)CC3)oc12
C33H35F3N10O6
724.701000
DFAIABHDMOLQDA-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB
BindingDB:BDBM50562649
Local ready
Direct docking supported
E3L060646
BDB060646
BDBM50562958
N#Cc1ccc(C(=O)N2CCCC2c2ccc(Cl)cc2)cc1
C18H15ClN2O
310.784000
XJPAFFIKAUYDIG-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50562958; PubChem:CID45874401
Local ready
Direct docking supported
E3L060647
BDB060647
4-(2-Phenylpyrrolidine-1-carbonyl)benzonitrile
N#Cc1ccc(C(=O)N2CCCC2c2ccccc2)cc1
C18H16N2O
276.339000
OECRRFQZOUXUPL-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50562959; PubChem:CID47017826
Local ready
Direct docking supported
E3L060648
BDB060648
BDBM50562960
COc1ccc(C2CCCN2C(=O)c2ccc(C#N)cc2)cc1
C19H18N2O2
306.365000
AWDWOBNOEJNFCL-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50562960; PubChem:CID42919735
Local ready
Direct docking supported
E3L060649
BDB060649
4-(2-Pyridin-4-ylpyrrolidine-1-carbonyl)benzonitrile
N#Cc1ccc(C(=O)N2CCCC2c2ccncc2)cc1
C17H15N3O
277.327000
FGGQYJPFNJAXLQ-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50562961; PubChem:CID45836489
Local ready
Direct docking supported
E3L060650
BDB060650
BDBM50562962
N#Cc1ccc(C(=O)N2CCCC2c2ccc3c(c2)OCCO3)cc1
C20H18N2O3
334.375000
RWQVOCGUFUWPDN-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50562962; PubChem:CID17515111
Local ready
Direct docking supported
E3L060651
BDB060651
4-(2-Thiophen-3-ylpyrrolidine-1-carbonyl)benzonitrile
N#Cc1ccc(C(=O)N2CCCC2c2ccsc2)cc1
C16H14N2OS
282.368000
ZPPBIPYUGJCEQA-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50562963; PubChem:CID45893556
Local ready
Direct docking supported
E3L060652
BDB060652
BDBM50562964
COC(=O)c1ccc(C(=O)N2CCCC2c2ccc(F)cc2)cc1
C19H18FNO3
327.355000
LGLGCIXKNFHFJZ-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50562964; PubChem:CID70759121
Local ready
Direct docking supported
E3L060653
BDB060653
BDBM50562965
O=C(c1ccc(N2CNC=N2)cc1)N1CCCC1c1ccc(F)cc1
C19H19FN4O
338.386000
KGGCDCLRIGGOAO-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50562965; PubChem:CID162654754
Local ready
Direct docking supported
E3L060654
BDB060654
BDBM50562966
N#Cc1ccc(C(=O)N(Cc2ccc(F)cc2)C2CC2)cc1
C18H15FN2O
294.329000
GANZESJYJAYISW-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50562966; PubChem:CID27831641
Local ready
Direct docking supported
E3L060655
BDB060655
4-cyano-N-[(4-fluorophenyl)methyl]-N-methylbenzamide
CN(Cc1ccc(F)cc1)C(=O)c1ccc(C#N)cc1
C16H13FN2O
268.291000
RTMJZHDLXWKYAF-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50562967; PubChem:CID7970923
Local ready
Direct docking supported
E3L060656
BDB060656
BDBM50562968
N#Cc1ccc(C(=O)N(Cc2ccc(F)cc2)C2CCC2)cc1
C19H17FN2O
308.356000
ALSUEUGZTSVRQL-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50562968; PubChem:CID162663185
Local ready
Direct docking supported
E3L060657
BDB060657
4-cyano-N-cyclopropyl-N-(thiophen-2-ylmethyl)benzamide
N#Cc1ccc(C(=O)N(Cc2cccs2)C2CC2)cc1
C16H14N2OS
282.368000
WYAGGMZTARRIDX-UHFFFAOYSA-N O96028, Q9BZ95 Histone-lysine N-methyltransferase NSD2, Histone-lysine N-methyltransferase NSD3
BindingDB, PubChem
BindingDB:BDBM50562969; PubChem:CID37484611
Local ready
Direct docking supported
E3L060658
BDB060658
4-cyano-N-cyclopropyl-N-(oxolan-3-ylmethyl)benzamide
N#Cc1ccc(C(=O)N(CC2CCOC2)C2CC2)cc1
C16H18N2O2
270.332000
JPZDEPRCOUWPRE-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50562970; PubChem:CID47209994
Local ready
Direct docking supported
E3L060659
BDB060659
BDBM50562971
N#Cc1ccc(C(C(N)=O)N2CCC2c2ccc(Cl)cc2)cc1
C18H16ClN3O
325.799000
HJVJIZUPAQKKKD-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50562971; PubChem:CID75430881
Local ready
Direct docking supported
E3L060660
BDB060660
1,2,3,4,5,6,7,8-Octachloro-9h-carbazole
Clc1c(Cl)c(Cl)c2c([nH]c3c(Cl)c(Cl)c(Cl)c(Cl)c32)c1Cl
C12HCl8N
442.771000
HMXCAROPJPNCQV-UHFFFAOYSA-N P35869 Aryl hydrocarbon receptor
BindingDB, PubChem
BindingDB:BDBM50563363; PubChem:CID236488
Local ready
Direct docking supported