E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L062361
BDB062361
CBP/p300-IN-17
COc1ccc(C2(C(=O)N3CCC[C@@H]3C(=O)Nc3cccc4[nH]ncc34)CCCC2)cc1
C25H28N4O3
432.524000
KRGAGJKQQRBFEC-JOCHJYFZSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM50600301; PubChem:CID142504112
Local ready
Direct docking supported
E3L062362
BDB062362
CBP/p300-IN-18
COc1ccc(C2(C(=O)N3C[C@H](F)C[C@@H]3C(=O)Nc3cccc4[nH]ncc34)CCCC2)cc1
C25H27FN4O3
450.514000
FLUJAHQWJJQENP-VGOFRKELSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM50600302; PubChem:CID163408981
Local ready
Direct docking supported
E3L062363
BDB062363
BDBM50600303
COc1ccc(C2(C(=O)N3C[C@@H](O)C[C@@H]3C(=O)Nc3cccc4[nH]ncc34)CCCC2)cc1
C25H28N4O4
448.523000
UQKNCQXHKZNFDX-HTAPYJJXSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM50600303; PubChem:CID168271390
Local ready
Direct docking supported
E3L062364
BDB062364
BDBM50600304
COc1ccc(C2(C(=O)N3C[C@H](O)C[C@@H]3C(=O)Nc3cccc4[nH]ncc34)CCCC2)cc1
C25H28N4O4
448.523000
UQKNCQXHKZNFDX-VGOFRKELSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM50600304; PubChem:CID142504079
Local ready
Direct docking supported
E3L062365
BDB062365
BDBM50600305
COc1ccc(C2(C(=O)N3CS(=O)(=O)C[C@@H]3C(=O)Nc3cccc4[nH]ncc34)CCCC2)cc1
C24H26N4O5S
482.562000
VWZAAFMUYDNGED-OAQYLSRUSA-N Q09472, Q92793, Q92831 Histone acetyltransferase KAT2B, Histone acetyltransferase p300, CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM50600305; PubChem:CID163196908
Local ready
Direct docking supported
E3L062366
BDB062366
BDBM50600338
CC(=O)NC(CCCCN)C(=O)NCCCCCC(=O)N[C@H](C(=O)N[C@@H](CO)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@]1(C)CCCCCC/C=C/CCC[C@@](C)(C(=O)N[C@@H](CCC(=O)O)C(=O)N[C@@H](CC(N)=O)C(=O)N[C@@H](Cc2ccccc2)C(N)=O)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](C)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)[C@H](Cc2ccc(O)cc2)NC(=O)[C@H](CCC(=O)O)NC1=O)[C@@H](C)O
C105H152N20O25
2094.486000
HRGYNFNFYVAQPD-SDCUFHLNSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50600338
Local ready
Direct docking supported
E3L062367
BDB062367
BDBM50600339
CC(=O)NC(CCCCNC(=O)c1cccc(I)c1)C(=O)NCCCCCC(=O)N[C@H](C(=O)N[C@@H](CO)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@]1(C)CCCCCC/C=C/CCC[C@@](C)(C(=O)N[C@@H](CCC(=O)O)C(=O)N[C@@H](CC(N)=O)C(=O)N[C@@H](Cc2ccccc2)C(N)=O)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](C)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)[C@H](Cc2ccc(O)cc2)NC(=O)[C@H](CCC(=O)O)NC1=O)[C@@H](C)O
C112H155IN20O26
2324.490000
WHYOETRHRJHBTG-IKXKSZOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50600339
Local ready
Direct docking supported
E3L062368
BDB062368
BDBM50600441
CCOP(=O)(OCC)C(Nc1ccc(C)c(Nc2nccc(-c3cccnc3)n2)c1)c1scnc1C
C25H29N6O3PS
524.587000
IOGOXIFSMAQQPS-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50600441; PubChem:CID168276319
Local ready
Direct docking supported
E3L062369
BDB062369
BDBM50600442
CCOP(=O)(OCC)C(Nc1ccc(C)c(Nc2nccc(-c3cccnc3)n2)c1)c1ccn[nH]1
C24H28N7O3P
493.508000
IZQYRTPRXYJMAX-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50600442; PubChem:CID168292170
Local ready
Direct docking supported
E3L062370
BDB062370
BDBM50600443
CCOP(=O)(OCC)C(Nc1ccc(C)c(Nc2nccc(-c3cccnc3)n2)c1)c1ccc[nH]1
C25H29N6O3P
492.520000
FYWIPSZJJOUPAR-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50600443; PubChem:CID168272450
Local ready
Direct docking supported
E3L062371
BDB062371
BDBM50601182
COCCCOc1cc(CN(C(=O)[C@@H]2CCCNC2)C2CC2)ccc1OC
C21H32N2O4
376.497000
KJTANWCXDGQBBZ-QGZVFWFLSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50601182; PubChem:CID168294246
Local ready
Direct docking supported
E3L062372
BDB062372
BDBM50601183
COCCCOc1cc(CN(C(=O)[C@H]2CCCNC2)C2CC2)ccc1OC
C21H32N2O4
376.497000
KJTANWCXDGQBBZ-KRWDZBQOSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50601183; PubChem:CID67208452
Local ready
Direct docking supported
E3L062373
BDB062373
BDBM50601184
COCCCOc1cc(CN(C(=O)[C@@H]2CCNC2)C2CC2)ccc1OC
C20H30N2O4
362.470000
YXMKCWJEXYMJQU-MRXNPFEDSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50601184; PubChem:CID168290925
Local ready
Direct docking supported
E3L062374
BDB062374
BDBM50601185
COCCCOc1cc(CN(C(=O)[C@H]2CCNC2)C2CC2)ccc1OC
C20H30N2O4
362.470000
YXMKCWJEXYMJQU-INIZCTEOSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50601185; PubChem:CID168282667
Local ready
Direct docking supported
E3L062375
BDB062375
BDBM50601186
COCCCOc1cc(CN(C(=O)[C@H]2CNCCO2)C2CC2)ccc1OC
C20H30N2O5
378.469000
KZBIKFBHOIUTGI-LJQANCHMSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50601186; PubChem:CID67541956
Local ready
Direct docking supported
E3L062376
BDB062376
BDBM50601187
COCCCOc1cc(CN(C(=O)[C@@H]2CNCCO2)C2CC2)ccc1OC
C20H30N2O5
378.469000
KZBIKFBHOIUTGI-IBGZPJMESA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50601187; PubChem:CID168276193
Local ready
Direct docking supported
E3L062377
BDB062377
BDBM50601188
COCCCOc1cc(CN(C(=O)C2CNCCN2)C2CC2)ccc1OC
C20H31N3O4
377.485000
GSGUHXFRDKAYNF-UHFFFAOYSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50601188; PubChem:CID168283528
Local ready
Direct docking supported
E3L062378
BDB062378
BDBM50601189
COCCCOc1cc(CN(C(=O)[C@H]2CNCCO2)C2CC2)cc2ccoc12
C21H28N2O5
388.464000
GGIYFKIWUMFKGU-LJQANCHMSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50601189; PubChem:CID59494504
Local ready
Direct docking supported
E3L062379
BDB062379
BDBM50601190
COCCCn1ccc2ccc(CN(C(=O)[C@H]3CNCCO3)C3CC3)cc21
C21H29N3O3
371.481000
OTFAWOGDENVOCF-HXUWFJFHSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50601190; PubChem:CID25124583
Local ready
Direct docking supported
E3L062380
BDB062380
BDBM50601191
COCCCn1c(C)c(CN(C(=O)[C@H]2CNCCO2)C2CC2)c2ccccc21
C22H31N3O3
385.508000
PUMYXWWVNYFWDQ-OAQYLSRUSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50601191; PubChem:CID168271654
Local ready
Direct docking supported