E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L062301
BDB062301
BDBM50597103
C[C@H]1COC(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc3n(C)c2=O)N1
C20H16ClN5O3
409.833000
HECAYGOIQMGZQS-JTQLQIEISA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50597103; PubChem:CID146171902
Local ready
Direct docking supported
E3L062302
BDB062302
BDBM50597104
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc31)N[C@H](C1CC1)CCO2
C22H20ClN5O2
421.888000
YYUZEYWEXPZHOG-INIZCTEOSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50597104; PubChem:CID146171933
Local ready
Direct docking supported
E3L062303
BDB062303
BDBM50597105
C[C@H]1C[C@H](C)Oc2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc3n(C)c2=O)N1
C21H20ClN5O2
409.877000
OKPHKEBKWFZNHM-RYUDHWBXSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50597105; PubChem:CID146172017
Local ready
Direct docking supported
E3L062304
BDB062304
US20230287003, Example 1h
CC1Nc2c(c(=O)n(C)c3ccc(Nc4ccnc(Cl)c4C#N)cc23)OCC1(C)C
C22H22ClN5O2
423.904000
PPADEHLCGUTNFC-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50597106; PubChem:CID146172123
Local ready
Direct docking supported
E3L062305
BDB062305
US20230287003, Example 1i
CC1Nc2c(c(=O)n(C)c3ccc(Nc4ccnc(Cl)c4C#N)cc23)OCC12CC2
C22H20ClN5O2
421.888000
CPRJDQUHIKJKEF-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50597107; PubChem:CID155758479
Local ready
Direct docking supported
E3L062306
BDB062306
Bcl6-IN-9
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C22H18ClF2N5O2
457.868000
NDXNRYJTYFEIAB-IBGZPJMESA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50597108; PubChem:CID146172127
Local ready
Direct docking supported
E3L062307
BDB062307
BDBM50597109
CCNc1c(C)c(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc12
C19H18ClN5O
367.840000
AAVLXLCJTOLPIR-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50597109; PubChem:CID163359800
Local ready
Direct docking supported
E3L062308
BDB062308
BDBM50597110
N#Cc1c(Nc2ccc3[nH]c(=O)c4c(c3c2)NCCC4)ccnc1Cl
C18H14ClN5O
351.797000
LZMPTDYFGCJTDB-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50597110; PubChem:CID168288488
Local ready
Direct docking supported
E3L062309
BDB062309
BDBM50597111
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc31)N[C@H](C1CC1)C(F)(F)CO2
C22H18ClF2N5O2
457.868000
NDXNRYJTYFEIAB-LJQANCHMSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50597111; PubChem:CID168270514
Local ready
Direct docking supported
E3L062310
BDB062310
BDBM50597112
CC1CC(C)(C)Oc2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc3n(C)c2=O)N1
C22H22ClN5O2
423.904000
DHQHASLUPQTYSL-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50597112; PubChem:CID146172076
Local ready
Direct docking supported
E3L062311
BDB062311
US20230287003, Example 1p
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc31)NC(C(F)F)CCO2
C20H16ClF2N5O2
431.830000
YQDCNZJTMIVISO-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50597113; PubChem:CID146171972
Local ready
Direct docking supported
E3L062312
BDB062312
BDBM50597114
CC(C)C1CCOc2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc3n(C)c2=O)N1
C22H22ClN5O2
423.904000
IACFBZCXKVSFRE-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50597114; PubChem:CID146172082
Local ready
Direct docking supported
E3L062313
BDB062313
BDBM50597115
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc31)NC(C1CCC1)CCO2
C23H22ClN5O2
435.915000
GISKHXZSGACLCD-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50597115; PubChem:CID146172059
Local ready
Direct docking supported
E3L062314
BDB062314
BDBM50597116
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc31)NCCCO2
C19H16ClN5O2
381.823000
ZQSPFQGFGSVTTC-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50597116; PubChem:CID146188905
Local ready
Direct docking supported
E3L062315
BDB062315
BDBM50597117
C[C@H]1COCc2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc3n(C)c2=O)N1
C20H18ClN5O2
395.850000
URBCFCHCJQINQC-NSHDSACASA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50597117; PubChem:CID146172041
Local ready
Direct docking supported
E3L062316
BDB062316
US20230287003, Example 1k
CC1COc2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc3n(C)c2=O)N1
C19H16ClN5O2
381.823000
OCOBDJHXJUVKDY-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50597118; PubChem:CID146191440
Local ready
Direct docking supported
E3L062317
BDB062317
US20230287003, Example 10a
CC1CCc2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc3n(C)c2=O)N1
C20H18ClN5O
379.851000
MAWKLVJDUIOOTD-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50597119; PubChem:CID146189007
Local ready
Direct docking supported
E3L062318
BDB062318
Dalzanemdor
C[C@H](CC[C@](C)(O)C(F)(F)F)[C@H]1CC[C@H]2[C@@H]3CC=C4C[C@@](C)(O)CC[C@]4(C)[C@H]3CC[C@]12C
C27H43F3O2
456.633000
BVBRUQYHUXKZMQ-JNVAYQLDSA-N Q7Z4S6 Kinesin-like protein KIF21A
BindingDB, PubChem
BindingDB:BDBM50597430; PubChem:CID86305217
Local ready
Direct docking supported
E3L062319
BDB062319
BDBM50597764
CC1(C)C=Cc2cc3c(cc2O1)C[C@H](c1ccc(O)c(O)c1)CC3=O
C21H20O4
336.387000
PCGPJCTUZODOJY-AWEZNQCLSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50597764; PubChem:CID168288979
Local ready
Direct docking supported
E3L062320
BDB062320
BDBM50597765
COc1ccc([C@@H]2CC(=O)c3cc4c(cc3C2)OC(C)(C)C=C4)cc1O
C22H22O4
350.414000
WJRHETAREHGGMI-HNNXBMFYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50597765; PubChem:CID168273210
Local ready
Direct docking supported