E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L063541
BDB063541
BDBM50621582
COC(=O)/C=C/CNC(=O)c1cc2c([nH]c1=O)CCC2
C14H16N2O4
276.292000
OXSXWJOEUNMOPW-ZZXKWVIFSA-N Q96EP0 E3 ubiquitin-protein ligase RNF31
BindingDB, PubChem
BindingDB:BDBM50621582; PubChem:CID172447054
Local ready
Direct docking supported
E3L063542
BDB063542
2-Chloro-N-(4-phenoxyphenyl)acetamide
O=C(CCl)Nc1ccc(Oc2ccccc2)cc1
C14H12ClNO2
261.708000
PHUZNDQAFGNCRQ-UHFFFAOYSA-N P78317 E3 ubiquitin-protein ligase RNF4
BindingDB, PubChem
BindingDB:BDBM50621583; PubChem:CID736969
Local ready
Direct docking supported
E3L063543
BDB063543
BDBM50621658
CC(=O)N1CC2CCC(C1)N2c1ncc(Cl)c(Nc2ccc3c(c2)c2c(c(=O)n3C)OCC(F)(F)[C@H](C3CC3)N2)n1
C28H30ClF2N7O3
586.043000
YTUULHQULDBUET-XCNDVJPKSA-N P41182 B-cell lymphoma 6 protein
BindingDB
BindingDB:BDBM50621658
Local ready
Direct docking supported
E3L063544
BDB063544
BDBM50621659
CC(=O)N1C2CCC1CN(c1ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC(F)(F)[C@H](C4CC4)N3)n1)C2
C28H30ClF2N7O3
586.043000
YYIQZYNTSIGKMS-XCNDVJPKSA-N P41182 B-cell lymphoma 6 protein
BindingDB
BindingDB:BDBM50621659
Local ready
Direct docking supported
E3L063545
BDB063545
BDBM50621660
Cn1c(=O)c2c(c3cc(Nc4nc(N5[C@@H]6COC[C@H]5C[C@H](O)C6)ncc4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C27H29ClF2N6O4
575.016000
NSEFNIYZBRIBKB-HGFRQNNFSA-N P41182 B-cell lymphoma 6 protein
BindingDB
BindingDB:BDBM50621660
Local ready
Direct docking supported
E3L063546
BDB063546
BDBM50621661
Cn1c(=O)c2c(c3cc(Nc4nc(N5CCC5)ncc4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C23H23ClF2N6O2
488.926000
SMBGAUXQNOXKIW-IBGZPJMESA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50621661; PubChem:CID156277180
Local ready
Direct docking supported
E3L063547
BDB063547
BDBM50621662
COC1CN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC(F)(F)[C@H](C4CC4)N3)n2)C1
C24H25ClF2N6O3
518.952000
GBUBWTJMDIZQJI-FQEVSTJZSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50621662; PubChem:CID156276659
Local ready
Direct docking supported
E3L063548
BDB063548
BDBM50621663
Cn1c(=O)c2c(c3cc(Nc4nc(N5CC(F)(F)C5)ncc4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C23H21ClF4N6O2
524.906000
JNUQAESGHXAITM-SFHVURJKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50621663; PubChem:CID156276796
Local ready
Direct docking supported
E3L063549
BDB063549
BDBM50621664
Cn1c(=O)c2c(c3cc(Nc4nc(N5CC(C#N)C5)ncc4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C24H22ClF2N7O2
513.936000
VZGLMYCTCYVSQK-FQEVSTJZSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50621664; PubChem:CID156277196
Local ready
Direct docking supported
E3L063550
BDB063550
BDBM50621665
Cn1c(=O)c2c(c3cc(Nc4nc(N5CC(F)C5)ncc4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C23H22ClF3N6O2
506.916000
FCRGNHRJSCJXDA-IBGZPJMESA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50621665; PubChem:CID156276669
Local ready
Direct docking supported
E3L063551
BDB063551
BDBM50621666
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C21H18Cl2F2N4O2
467.303000
IZJMRCTZDBCUHT-SFHVURJKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50621666; PubChem:CID156276648
Local ready
Direct docking supported
E3L063552
BDB063552
BDBM50621667
Cc1nccc(Nc2ccc3c(c2)c2c(c(=O)n3C)OCC(F)(F)[C@H](C3CC3)N2)c1Cl
C22H21ClF2N4O2
446.885000
NMCXQPBZVFQDAA-FQEVSTJZSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50621667; PubChem:CID156276763
Local ready
Direct docking supported
E3L063553
BDB063553
BDBM50621668
Cn1c(=O)c2c(c3cc(Nc4ccnc(F)c4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C21H18ClF3N4O2
450.848000
MCRHRRIGPAVFNY-SFHVURJKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50621668; PubChem:CID156276733
Local ready
Direct docking supported
E3L063554
BDB063554
BDBM50621669
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4F)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C21H18ClF3N4O2
450.848000
JTJKITJOSCGZOP-SFHVURJKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50621669; PubChem:CID156276841
Local ready
Direct docking supported
E3L063555
BDB063555
BDBM50621710
O=C(O[C@H]1[C@H](OC(=O)c2cc(OS(=O)(=O)O)cc(OS(=O)(=O)O)c2)[C@H](OC(=O)c2cc(OS(=O)(=O)O)cc(OS(=O)(=O)O)c2)[C@@H](OC(=O)c2cc(OS(=O)(=O)O)cc(OS(=O)(=O)O)c2)[C@H](OC(=O)c2cc(OS(=O)(=O)O)cc(OS(=O)(=O)O)c2)[C@H]1OC(=O)c1cc(OS(=O)(=O)O)cc(OS(=O)(=O)O)c1)c1cc(OS(=O)(=O)O)cc(OS(=O)(=O)O)c1
C48H36O60S12
1957.560000
DGLVLLGQDWLQSC-AZOCGYLKSA-N P00748 Coagulation factor XII
BindingDB
BindingDB:BDBM50621710
Local ready
Direct docking supported
E3L063556
BDB063556
BDBM50621751
O=C(O)Cc1ccc(-c2ccc(OCc3c(-c4c(Cl)cccc4Cl)noc3C3CC3)cc2)cc1
C27H21Cl2NO4
494.374000
AJXYOQYFSSSTMZ-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50621751; PubChem:CID170551899
Local ready
Direct docking supported
E3L063557
BDB063557
BDBM50621752
O=C(O)C1(c2cccc(-c3ccc(OCc4c(-c5c(Cl)cccc5Cl)noc4C4CC4)cc3)c2)CC1
C29H23Cl2NO4
520.412000
GFQRXOXNBQDNBC-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50621752; PubChem:CID168355560
Local ready
Direct docking supported
E3L063558
BDB063558
BDBM50622003
CC1=NN(c2ccc(C(=O)O)cc2)C(=O)/C1=C\c1cc(C(=O)c2ccccc2)c[nH]1
C23H17N3O4
399.406000
IARKTIIMKCSZKS-NDENLUEZSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM50622003; PubChem:CID172440208
Local ready
Direct docking supported
E3L063559
BDB063559
BDBM50622004
CC1=NN(c2ccc(C(=O)O)cc2)C(=O)/C1=C\c1cc(C(=O)c2ccccc2[N+](=O)[O-])c[nH]1
C23H16N4O6
444.403000
KOXPUAJSJWZSTB-ODLFYWEKSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM50622004; PubChem:CID172471696
Local ready
Direct docking supported
E3L063560
BDB063560
BDBM50622006
CC1=NN(c2ccc(C(=O)O)cc2)C(=O)/C1=C\c1cc(C(=O)c2ccccc2Cl)c[nH]1
C23H16ClN3O4
433.851000
TWLOTTFBGNKEMS-ODLFYWEKSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM50622006; PubChem:CID172470358
Local ready
Direct docking supported