E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L063661
BDB063661
Parp-1-IN-3
NC(=O)c1ccccc1OCc1cccc(NC(=O)c2ccc(Br)cc2)c1
C21H17BrN2O3
425.282000
VYGPONYCLGMRIN-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50623715; PubChem:CID168355539
Local ready
Direct docking supported
E3L063662
BDB063662
BDBM50623716
NC(=O)c1ccccc1NCc1cccc(NC(=O)Nc2cccc(Br)c2)c1
C21H19BrN4O2
439.313000
XWIGUMPDQVWUGH-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50623716; PubChem:CID171062559
Local ready
Direct docking supported
E3L063663
BDB063663
BDBM50623717
NC(=O)c1ccccc1OCc1cccc(NC(=O)Nc2cccc(Br)c2)c1
C21H18BrN3O3
440.297000
AKRLOQKVHUWNFB-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50623717; PubChem:CID171062575
Local ready
Direct docking supported
E3L063664
BDB063664
BDBM50624089
CCOc1ccc([C@H]2[C@](C)([N+](=O)[O-])[C@H](c3ccccc3)N[C@]2(C)C(=O)OC)cc1
C22H26N2O5
398.459000
LVSHUYCCOPBIHN-WAGURGNTSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50624089; PubChem:CID169096901
Local ready
Direct docking supported
E3L063665
BDB063665
BDBM50624182
CC(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CO)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@H](C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@]1(C)CCCCCC/C=C/CCC[C@](C)(C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CC(N)=O)C(N)=O)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(N)=O)NC1=O)[C@@H](C)O
C98H153N27O25
2109.466000
DFSDBFJUWANYES-NOGNSAKRSA-N O15151, Q00987 E3 ubiquitin-protein ligase Mdm2, Protein Mdm4
BindingDB
BindingDB:BDBM50624182
Local ready
Direct docking supported
E3L063666
BDB063666
Sulanemadlin
CC(=O)N[C@@H](CC(C)C)C(=O)N[C@H](C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@]1(C)CCCCCC/C=C/CCC[C@@](C)(C(=O)N[C@@H](C)C(=O)N[C@@H](C)C(=O)N[C@@H](C)C(=O)N[C@@H](C)C(=O)N[C@@H](C)C(=O)N[C@H](C)C(N)=O)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCC(N)=O)NC(=O)[C@H](C)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)[C@H](Cc2ccc(O)cc2)NC(=O)[C@H](CCC(=O)O)NC1=O)[C@@H](C)O
C95H140N20O23
1930.282000
VDLGAZDAHPLOIR-RLPDZDIMSA-N O15151, Q00987 E3 ubiquitin-protein ligase Mdm2, Protein Mdm4
BindingDB, PubChem
BindingDB:BDBM50624183; PubChem:CID164182053
Local ready
Direct docking supported
E3L063667
BDB063667
BDBM50624184
CC(=O)N[C@@H](CC(C)C)C(=O)N[C@H](C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@]1(C)CCCCCC/C=C\CCC[C@@](C)(C(=O)N[C@@H](C)C(=O)N[C@@H](C)C(=O)N[C@@H](C)C(=O)O)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCC(N)=O)NC(=O)[C@H](C)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)[C@H](Cc2ccc(O)cc2)NC(=O)[C@H](CCC(=O)O)NC1=O)[C@@H](C)O
C86H124N16O21
1718.029000
XVIHVXMWBXWGEA-DFBULROASA-N O15151, Q00987 Protein Mdm4, E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50624184
Local ready
Direct docking supported
E3L063668
BDB063668
BDBM50624185
CC(=O)N[C@@H](CC(C)C)C(=O)N[C@H](C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@]1(C)CCCCCC/C=C\CCC[C@@](C)(C(=O)N[C@@H](CO)C(=O)N[C@@H](C)C(=O)N[C@@H](C)C(N)=O)NC(=O)[C@H](CC2CCC2)NC(=O)[C@H](C)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)[C@H](Cc2ccc(O)cc2)NC(=O)[C@H](CCC(=O)O)NC1=O)[C@@H](C)O
C82H117N15O19
1616.924000
ALZYGOCWUAGMMY-BRNADKDGSA-N O15151, Q00987 Protein Mdm4, E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50624185
Local ready
Direct docking supported
E3L063669
BDB063669
BDBM50624186
CC(=O)N[C@@H](CC(C)C)C(=O)N[C@H](C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@]1(C)CCCCCC/C=C/CCC[C@@](C)(C(=O)N[C@@H](CO)C(N)=O)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCC(N)=O)NC(=O)[C@H](C)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)[C@H](Cc2ccc(O)cc2)NC(=O)[C@H](Cc2cnc[nH]2)NC1=O)[C@@H](C)O
C81H115N17O17
1598.913000
YFXWHQMBVPZJBJ-MPGNVRTMSA-N O15151, Q00987 E3 ubiquitin-protein ligase Mdm2, Protein Mdm4
BindingDB
BindingDB:BDBM50624186
Local ready
Direct docking supported
E3L063670
BDB063670
BDBM50624748
Oc1cc(O)cc(/C=C/c2cc(-c3ccoc3)ccc2O)c1
C18H14O4
294.306000
RQYRGOGJQLBVAY-OWOJBTEDSA-N Q96FA3 E3 ubiquitin-protein ligase pellino homolog 1
BindingDB, PubChem
BindingDB:BDBM50624748; PubChem:CID172465979
Local ready
Direct docking supported
E3L063671
BDB063671
Anticancer agent 126
Cc1cc(=O)c(C(=O)NCc2c(F)cc(-c3cccc(S(=O)(=O)F)c3)cc2F)nn1-c1ccccc1
C25H18F3N3O4S
513.497000
KCMSIHHWMOTDFN-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM50625549; PubChem:CID170903355
Local ready
Direct docking supported
E3L063672
BDB063672
Indeglitazar
COc1ccc(S(=O)(=O)n2cc(CCC(=O)O)c3cc(OC)ccc32)cc1
C19H19NO6S
389.429000
YMPALHOKRBVHOJ-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50625679; PubChem:CID11395145
Local ready
Direct docking supported
E3L063673
BDB063673
BDBM50625680
[2H]C([2H])(Cc1cn(S(=O)(=O)c2ccc3c(c2)CCO3)c2ccc(OC)cc12)C(=O)O
C20H19NO6S
403.452204
MMKWEHLTLWLVDJ-RJSZUWSASA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50625680; PubChem:CID172445868
Local ready
Direct docking supported
E3L063674
BDB063674
BDBM50625681
[2H]C([2H])(Cc1cn(S(=O)(=O)c2ccc(OC(F)(F)F)cc2)c2ccc(OC)cc12)C(=O)O
C19H16F3NO6S
445.411204
GCVICSIJFQUEIL-KNXIQCGSSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50625681; PubChem:CID172462207
Local ready
Direct docking supported
E3L063675
BDB063675
BDBM50625682
[2H]C([2H])(Cc1cn(S(=O)(=O)c2ccc(OC)cc2)c2ccc(C3CC3)cc12)C(=O)O
C21H21NO5S
401.480204
QOCJESKTFDEJKQ-ZWGOZCLVSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50625682; PubChem:CID172468954
Local ready
Direct docking supported
E3L063676
BDB063676
BDBM50625683
[2H]C([2H])(Cc1cn(S(=O)(=O)c2ccc(C3CC3)cc2)c2ccc(OC)cc12)C(=O)O
C21H21NO5S
401.480204
ATLBKEBVHANWAR-ZWGOZCLVSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50625683; PubChem:CID172450975
Local ready
Direct docking supported
E3L063677
BDB063677
BDBM50626155
CCc1nc2c(F)cc(CN3CCN(c4ccc(C(=O)NC)nc4)CC3)cc2[nH]c1=O
C22H25FN6O2
424.480000
SBBAABNKJORFCD-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50626155; PubChem:CID169110636
Local ready
Direct docking supported
E3L063678
BDB063678
BDBM50626156
Cc1nc2c(F)cc(CN3CCN(c4ccc(C(=O)NC5CC5)nc4F)CC3)cc2[nH]c1=O
C23H24F2N6O2
454.481000
KPMUGYLNUWRMPT-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50626156; PubChem:CID169110693
Local ready
Direct docking supported
E3L063679
BDB063679
BDBM50626157
CNC(=O)c1ccc(N2CCN(Cc3cc(F)c4nc(C)c(=O)[nH]c4c3)CC2)c(F)n1
C21H22F2N6O2
428.443000
VOJTXMNMQJSFMQ-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50626157; PubChem:CID169110545
Local ready
Direct docking supported
E3L063680
BDB063680
BDBM50626158
CNC(=O)c1ccc(N2CCN(Cc3ccc4cc(C)c(=O)[nH]c4c3F)CC2)c(F)n1
C22H23F2N5O2
427.455000
KWSQCFXSKGLJCO-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50626158; PubChem:CID169110715
Local ready
Direct docking supported