E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L064401
BDB064401
BDBM50631803
O=C1CC[C@@H](C(=O)NCc2cccc(S(=O)(=O)F)c2)N1
C12H13FN2O4S
300.311000
CJYCQQJXIMHETF-JTQLQIEISA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM50631803; PubChem:CID172457867
Local ready
Direct docking supported
E3L064402
BDB064402
BDBM50631804
O=C1CC[C@H](C(=O)NCc2cccc(S(=O)(=O)F)c2)N1
C12H13FN2O4S
300.311000
CJYCQQJXIMHETF-SNVBAGLBSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM50631804; PubChem:CID172457325
Local ready
Direct docking supported
E3L064403
BDB064403
BDBM50631805
O=C1CCC(N2Cc3ccc(S(=O)(=O)F)cc3C2=O)CN1
C13H13FN2O4S
312.322000
FMHUAAAQVPKZPP-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM50631805; PubChem:CID172465973
Local ready
Direct docking supported
E3L064404
BDB064404
BDBM50631806
O=C1CCC(N2Cc3ccc(S(=O)(=O)F)cc3C2)C(=O)N1
C13H13FN2O4S
312.322000
CXFJUNPGGLCGBA-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM50631806; PubChem:CID172462308
Local ready
Direct docking supported
E3L064405
BDB064405
BDBM50631807
O=C1CCC(NC(=O)Cc2ccc(S(=O)(=O)F)cc2)C(=O)N1
C13H13FN2O5S
328.321000
GAQCMELJCRZXNV-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM50631807; PubChem:CID172467174
Local ready
Direct docking supported
E3L064406
BDB064406
BDBM50631808
O=C1CC[C@@H](C(=O)NCc2ccc(S(=O)(=O)F)cc2)N1
C12H13FN2O4S
300.311000
HNGGNEIRFTXTHE-JTQLQIEISA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM50631808; PubChem:CID172459458
Local ready
Direct docking supported
E3L064407
BDB064407
BDBM50631809
O=C1CC[C@H](C(=O)NCc2ccc(S(=O)(=O)F)cc2)N1
C12H13FN2O4S
300.311000
HNGGNEIRFTXTHE-SNVBAGLBSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM50631809; PubChem:CID172452420
Local ready
Direct docking supported
E3L064408
BDB064408
BDBM50631811
CC(=O)N[C@@H](C)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@H](C(=O)N[C@@H](CCC(=O)O)C(=O)N[C@H](C(=O)N[C@@H](Cc1cnc[nH]1)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CO)C(=O)NCCCCCC(=O)NCCCCCC(=O)N[C@@H](CCCCNC(=O)c1ccc(-c2c3ccc(=O)cc-3oc3cc(O)ccc23)c(C(=O)O)c1)C(N)=O)C(C)C)[C@@H](C)O
C91H136N24O24
1950.233000
LVHMEOMYGFPCIV-CLNRVIFCSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM50631811
Local ready
Direct docking supported
E3L064409
BDB064409
BDBM50631812
CC[C@H](C)[C@H](NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](CC(=O)O)NC(=O)COCCOCCNC(=S)Nc1ccc(-c2c3ccc(=O)cc-3oc3cc(O)ccc23)c(C(=O)O)c1)C(=O)N[C@H]1CC(=O)NCC[C@@H](C(=O)N[C@H](C(=O)N[C@@H](CCC(=O)O)C(N)=O)C(C)C)NC(=O)[C@H](C(C)C)NC(=O)[C@H](C(C)C)NC1=O
C80H107N15O30S
1790.878000
PSZBBHQYVVVGDN-LNKBOCRRSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM50631812
Local ready
Direct docking supported
E3L064410
BDB064410
Ac-Ala-Arg-Thr-Glu-Val-His-Leu-Arg-Lys-Ser-NH2
CC(=O)N[C@@H](C)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@H](C(=O)N[C@@H](CCC(=O)O)C(=O)N[C@H](C(=O)N[C@@H](Cc1cnc[nH]1)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CO)C(N)=O)C(C)C)[C@@H](C)O
C52H92N20O15
1237.433000
YABWHPOODAWVRU-RETQXLQUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM50631813; PubChem:CID172468264
Local ready
Direct docking supported
E3L064411
BDB064411
BDBM50631814
CC[C@H](C)[C@H](NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](CC(=O)O)NC(C)=O)C(=O)N[C@H]1CC(=O)NCC[C@@H](C(=O)N[C@H](C(=O)N[C@@H](CCC(=O)O)C(N)=O)C(C)C)NC(=O)[C@H](C(C)C)NC(=O)[C@H](C(C)C)NC1=O
C55H87N13O23
1298.369000
CYWWYCJTGSTQEL-XWYYWFNKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM50631814; PubChem:CID172464361
Local ready
Direct docking supported
E3L064412
BDB064412
Flt3/chk1-IN-2
CS(=O)(=O)N1CCc2cc(Nc3ncc(C(F)(F)F)c(NCCCN)n3)ccc2C1
C18H23F3N6O2S
444.483000
PROGKLMIRQVLRO-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50631824; PubChem:CID171038130
Local ready
Direct docking supported
E3L064413
BDB064413
9-acetyl-3,4,4a,9a-tetrahydro-2H-carbazol-1-one
CC(=O)N1c2ccccc2C2CCCC(=O)C21
C14H15NO2
229.279000
WNUNAHQKDMBSDA-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM50631962; PubChem:CID172458607
Local ready
Direct docking supported
E3L064414
BDB064414
BDBM50631963
COC1CCC(n2c([C@H]3CCCC(=O)N3c3ccc(F)c(F)c3)nc3cc(-c4c(C)noc4C)ccc32)CC1
C30H32F2N4O3
534.607000
SKDNDJWEBPQKCS-YJDKGBRESA-N Q09472, Q92793 CREB-binding protein, Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM50631963; PubChem:CID162648257
Local ready
Direct docking supported
E3L064415
BDB064415
BDBM50631964
COc1ccc2c(c1)N(CCC/C=C/c1cccc3c1N[C@@H](C)C(=O)N3)CCC2
C24H29N3O2
391.515000
JNZGQYRALRQXFZ-AUNFYEFLSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM50631964; PubChem:CID172471076
Local ready
Direct docking supported
E3L064416
BDB064416
BDBM50631965
CNC(=O)N1CCCc2cc(NC(=O)c3cccc(-c4ccncc4)c3)ccc21
C23H22N4O2
386.455000
CXQPLOXVAGCQRG-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM50631965; PubChem:CID172468405
Local ready
Direct docking supported
E3L064417
BDB064417
BDBM50631966
CCC1C(C(=O)NCc2c(O)ccc3cccc(O)c23)NC(C)C1C(C)=O
C21H26N2O4
370.449000
VMLSUMPPVZBRRT-UHFFFAOYSA-N Q09472, Q92793 Histone acetyltransferase p300, CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM50631966; PubChem:CID172440284
Local ready
Direct docking supported
E3L064418
BDB064418
Pcaf-IN-2
NNc1nn2c(C(F)(F)F)nnc2c2ccccc12
C10H7F3N6
268.202000
VXUZXROYRSNHSD-UHFFFAOYSA-N Q92831 Histone acetyltransferase KAT2B
BindingDB, PubChem
BindingDB:BDBM50631967; PubChem:CID622630
Local ready
Direct docking supported
E3L064419
BDB064419
BDBM50631968
Oc1ccc(/C=N/Nc2nn3c(-c4ccc(Cl)cc4)nnc3c3ccccc23)cc1
C22H15ClN6O
414.856000
IQLYWWADYJRNDD-ZMOGYAJESA-N Q92831 Histone acetyltransferase KAT2B
BindingDB, PubChem
BindingDB:BDBM50631968; PubChem:CID172448876
Local ready
Direct docking supported
E3L064420
BDB064420
BDBM50632190
CN(CCCC#Cc1cccc2c1CN(C1CCC(=O)NC1=O)C2=O)C(=O)CCN(C(=O)[C@@H]1CCCN1C(=O)[C@@H](NC(=O)c1cc2cc(C(F)(F)P(=O)(O)O)ccc2s1)C(C)(C)C)c1ccc(-c2nccs2)cc1
C52H54F2N7O10PS2
1070.147000
LOPYPDQOHNOVBM-QOIUHGAOSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50632190
Local ready
Direct docking supported